Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC2.36□□□□□ -2.03
RTN3O95197 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.36□□□□□ -2.03
RTN3O95197 AC087477.1-201ENST00000465747 340 ntBASIC2.36□□□□□ -2.03
RTN3O95197 RPL23AP75-201ENST00000491601 451 ntBASIC2.36□□□□□ -2.03
RTN3O95197 RNU2-19P-201ENST00000517288 84 ntBASIC2.36□□□□□ -2.03
RTN3O95197 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.36□□□□□ -2.03
RTN3O95197 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.36□□□□□ -2.03
RTN3O95197 AL359314.1-201ENST00000616913 261 ntBASIC2.36□□□□□ -2.03
RTN3O95197 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.36□□□□□ -2.03
RTN3O95197 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
RTN3O95197 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
RTN3O95197 MTND5P9-201ENST00000503854 1755 ntBASIC2.36□□□□□ -2.03
RTN3O95197 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
RTN3O95197 SNORD115-3-201ENST00000363100 82 ntBASIC2.35□□□□□ -2.03
RTN3O95197 RNU1-51P-201ENST00000365345 176 ntBASIC2.35□□□□□ -2.03
RTN3O95197 RNU6-596P-201ENST00000365395 98 ntBASIC2.35□□□□□ -2.03
RTN3O95197 MIR221-201ENST00000385135 110 ntBASIC2.35□□□□□ -2.03
RTN3O95197 RN7SKP32-201ENST00000410167 303 ntBASIC2.35□□□□□ -2.03
RTN3O95197 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC2.35□□□□□ -2.03
RTN3O95197 AL358453.1-201ENST00000422522 250 ntBASIC2.35□□□□□ -2.03
RTN3O95197 HMGN2P18-201ENST00000450680 270 ntBASIC2.35□□□□□ -2.03
RTN3O95197 AC055731.1-201ENST00000474387 401 ntBASIC2.35□□□□□ -2.03
RTN3O95197 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.35□□□□□ -2.03
RTN3O95197 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC2.35□□□□□ -2.03
RTN3O95197 MTND5P5-201ENST00000503764 376 ntBASIC2.35□□□□□ -2.03
RTN3O95197 RNU5F-4P-201ENST00000516581 114 ntBASIC2.35□□□□□ -2.03
RTN3O95197 AC007229.1-201ENST00000590455 412 ntBASIC2.35□□□□□ -2.03
RTN3O95197 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC2.35□□□□□ -2.03
RTN3O95197 MIR6128-201ENST00000615528 109 ntBASIC2.35□□□□□ -2.03
RTN3O95197 MIR6132-201ENST00000622083 109 ntBASIC2.35□□□□□ -2.03
RTN3O95197 SCARNA4-201ENST00000629045 128 ntBASIC2.35□□□□□ -2.03
RTN3O95197 AL133216.2-202ENST00000634512 349 ntBASIC2.35□□□□□ -2.03
RTN3O95197 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.34□□□□□ -2.03
RTN3O95197 RNU1-76P-201ENST00000362903 159 ntBASIC2.34□□□□□ -2.03
RTN3O95197 Y_RNA.279-201ENST00000364763 95 ntBASIC2.34□□□□□ -2.03
RTN3O95197 RNU4-9P-201ENST00000364951 139 ntBASIC2.34□□□□□ -2.03
RTN3O95197 RNA5SP37-201ENST00000365420 130 ntBASIC2.34□□□□□ -2.03
RTN3O95197 MT-TL1-201ENST00000386347 75 ntBASIC2.34□□□□□ -2.03
RTN3O95197 AL355497.1-201ENST00000406262 551 ntBASIC2.34□□□□□ -2.03
RTN3O95197 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.34□□□□□ -2.03
RTN3O95197 AC096638.1-201ENST00000444678 216 ntBASIC2.34□□□□□ -2.03
RTN3O95197 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC2.34□□□□□ -2.03
RTN3O95197 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.34□□□□□ -2.03
RTN3O95197 AC116337.1-201ENST00000509680 687 ntBASIC2.34□□□□□ -2.03
RTN3O95197 RNA5SP200-201ENST00000516360 103 ntBASIC2.34□□□□□ -2.03
RTN3O95197 RNU6-1098P-201ENST00000516772 96 ntBASIC2.34□□□□□ -2.03
RTN3O95197 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC2.34□□□□□ -2.03
RTN3O95197 AC026470.2-201ENST00000561492 181 ntBASIC2.34□□□□□ -2.03
RTN3O95197 MIR4648-201ENST00000580107 72 ntBASIC2.34□□□□□ -2.03
RTN3O95197 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.34□□□□□ -2.03
RTN3O95197 AC009831.4-201ENST00000620744 325 ntBASIC2.34□□□□□ -2.03
RTN3O95197 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.34□□□□□ -2.03
RTN3O95197 KPNA2P1-201ENST00000458289 1591 ntBASIC2.34□□□□□ -2.03
RTN3O95197 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.34□□□□□ -2.04
RTN3O95197 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.04
RTN3O95197 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.33□□□□□ -2.04
RTN3O95197 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
RTN3O95197 MIR548K-201ENST00000408406 116 ntBASIC2.33□□□□□ -2.04
RTN3O95197 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.33□□□□□ -2.04
RTN3O95197 RPS27P21-201ENST00000486977 252 ntBASIC2.33□□□□□ -2.04
RTN3O95197 RPS23P5-201ENST00000495419 428 ntBASIC2.33□□□□□ -2.04
RTN3O95197 RPS29P21-201ENST00000496272 170 ntBASIC2.33□□□□□ -2.04
RTN3O95197 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.33□□□□□ -2.04
RTN3O95197 AC005668.1-201ENST00000571142 476 ntBASIC2.33□□□□□ -2.04
RTN3O95197 AC025754.2-201ENST00000606491 432 ntBASIC2.33□□□□□ -2.04
RTN3O95197 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.33□□□□□ -2.04
RTN3O95197 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
RTN3O95197 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
RTN3O95197 MIRLET7G-201ENST00000362280 84 ntBASIC2.32□□□□□ -2.04
RTN3O95197 RNU6-593P-201ENST00000364716 112 ntBASIC2.32□□□□□ -2.04
RTN3O95197 RNU6-438P-201ENST00000365561 103 ntBASIC2.32□□□□□ -2.04
RTN3O95197 SNORA18.2-201ENST00000383865 132 ntBASIC2.32□□□□□ -2.04
RTN3O95197 AC074085.1-201ENST00000413598 418 ntBASIC2.32□□□□□ -2.04
RTN3O95197 RPL21P111-201ENST00000418453 477 ntBASIC2.32□□□□□ -2.04
RTN3O95197 RBMX2P4-201ENST00000441256 376 ntBASIC2.32□□□□□ -2.04
RTN3O95197 AC107399.1-201ENST00000451226 265 ntBASIC2.32□□□□□ -2.04
RTN3O95197 SNORD5.1-201ENST00000458800 75 ntBASIC2.32□□□□□ -2.04
RTN3O95197 RNU7-14P-201ENST00000459331 62 ntBASIC2.32□□□□□ -2.04
RTN3O95197 PRDX4P1-201ENST00000507189 574 ntBASIC2.32□□□□□ -2.04
RTN3O95197 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.32□□□□□ -2.04
RTN3O95197 ATP5EP1-201ENST00000510257 156 ntBASIC2.32□□□□□ -2.04
RTN3O95197 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.32□□□□□ -2.04
RTN3O95197 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.32□□□□□ -2.04
RTN3O95197 MIR4273-201ENST00000582824 84 ntBASIC2.32□□□□□ -2.04
RTN3O95197 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.32□□□□□ -2.04
RTN3O95197 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.32□□□□□ -2.04
RTN3O95197 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.32□□□□□ -2.04
RTN3O95197 AC016727.2-201ENST00000603988 621 ntBASIC2.32□□□□□ -2.04
RTN3O95197 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.32□□□□□ -2.04
RTN3O95197 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.32□□□□□ -2.04
RTN3O95197 AC005562.2-201ENST00000618264 111 ntBASIC2.32□□□□□ -2.04
RTN3O95197 RNU6-845P-201ENST00000362578 103 ntBASIC2.31□□□□□ -2.04
RTN3O95197 Y_RNA.166-201ENST00000363730 102 ntBASIC2.31□□□□□ -2.04
RTN3O95197 SNORA16B-201ENST00000364674 135 ntBASIC2.31□□□□□ -2.04
RTN3O95197 Y_RNA.332-201ENST00000365271 113 ntBASIC2.31□□□□□ -2.04
RTN3O95197 RNU6-1026P-201ENST00000384465 108 ntBASIC2.31□□□□□ -2.04
RTN3O95197 RNU6-160P-201ENST00000384591 107 ntBASIC2.31□□□□□ -2.04
RTN3O95197 SNORA48.3-201ENST00000391081 134 ntBASIC2.31□□□□□ -2.04
RTN3O95197 RNA5SP465-201ENST00000391195 109 ntBASIC2.31□□□□□ -2.04
RTN3O95197 MIR548F5-201ENST00000408421 86 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms