Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 MTND1P23-201ENST00000416931 372 ntBASIC2.14□□□□□ -2.07
BEST1O76090 AL035666.1-201ENST00000446195 348 ntBASIC2.14□□□□□ -2.07
BEST1O76090 OR2AQ1P-201ENST00000451972 200 ntBASIC2.14□□□□□ -2.07
BEST1O76090 TOMM22P6-201ENST00000465035 409 ntBASIC2.14□□□□□ -2.07
BEST1O76090 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.14□□□□□ -2.07
BEST1O76090 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2.14□□□□□ -2.07
BEST1O76090 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.14□□□□□ -2.07
BEST1O76090 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.14□□□□□ -2.07
BEST1O76090 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.14□□□□□ -2.07
BEST1O76090 AL359697.1-201ENST00000624879 587 ntBASIC2.14□□□□□ -2.07
BEST1O76090 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.14□□□□□ -2.07
BEST1O76090 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
BEST1O76090 RNA5SP276-201ENST00000362580 94 ntBASIC2.13□□□□□ -2.07
BEST1O76090 SNORD50.1-201ENST00000362987 71 ntBASIC2.13□□□□□ -2.07
BEST1O76090 RNA5SP493-201ENST00000364115 91 ntBASIC2.13□□□□□ -2.07
BEST1O76090 RNA5SP160-201ENST00000364866 120 ntBASIC2.13□□□□□ -2.07
BEST1O76090 RNU6-1026P-201ENST00000384465 108 ntBASIC2.13□□□□□ -2.07
BEST1O76090 MIR1289-2-201ENST00000408360 111 ntBASIC2.13□□□□□ -2.07
BEST1O76090 U3.40-201ENST00000408706 208 ntBASIC2.13□□□□□ -2.07
BEST1O76090 EIF4EP2-201ENST00000422816 654 ntBASIC2.13□□□□□ -2.07
BEST1O76090 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.13□□□□□ -2.07
BEST1O76090 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.13□□□□□ -2.07
BEST1O76090 snoU13.26-201ENST00000459452 105 ntBASIC2.13□□□□□ -2.07
BEST1O76090 RPL23AP75-201ENST00000491601 451 ntBASIC2.13□□□□□ -2.07
BEST1O76090 AF186996.7-201ENST00000492781 209 ntBASIC2.13□□□□□ -2.07
BEST1O76090 AP005660.1-201ENST00000522972 293 ntBASIC2.13□□□□□ -2.07
BEST1O76090 AF235103.2-201ENST00000525753 346 ntBASIC2.13□□□□□ -2.07
BEST1O76090 ANP32BP3-201ENST00000559213 706 ntBASIC2.13□□□□□ -2.07
BEST1O76090 MIR5089-201ENST00000580047 84 ntBASIC2.13□□□□□ -2.07
BEST1O76090 AC018638.8-201ENST00000588755 281 ntBASIC2.13□□□□□ -2.07
BEST1O76090 AC243960.4-201ENST00000600532 288 ntBASIC2.13□□□□□ -2.07
BEST1O76090 AC009318.2-201ENST00000610917 651 ntBASIC2.13□□□□□ -2.07
BEST1O76090 AC005562.2-201ENST00000618264 111 ntBASIC2.13□□□□□ -2.07
BEST1O76090 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC2.13□□□□□ -2.07
BEST1O76090 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC2.13□□□□□ -2.07
BEST1O76090 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.13□□□□□ -2.07
BEST1O76090 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
BEST1O76090 SNORA18.2-201ENST00000383865 132 ntBASIC2.12□□□□□ -2.07
BEST1O76090 MIR597-201ENST00000384968 97 ntBASIC2.12□□□□□ -2.07
BEST1O76090 RNA5SP212-201ENST00000391223 107 ntBASIC2.12□□□□□ -2.07
BEST1O76090 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC2.12□□□□□ -2.07
BEST1O76090 RNU6-1148P-201ENST00000410992 104 ntBASIC2.12□□□□□ -2.07
BEST1O76090 SNRPEP8-201ENST00000442866 260 ntBASIC2.12□□□□□ -2.07
BEST1O76090 FGF7P6-202ENST00000451282 293 ntBASIC2.12□□□□□ -2.07
BEST1O76090 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.12□□□□□ -2.07
BEST1O76090 AC016925.1-201ENST00000458303 298 ntBASIC2.12□□□□□ -2.07
BEST1O76090 AC007215.1-201ENST00000464893 276 ntBASIC2.12□□□□□ -2.07
BEST1O76090 AC087477.1-201ENST00000465747 340 ntBASIC2.12□□□□□ -2.07
BEST1O76090 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC2.12□□□□□ -2.07
BEST1O76090 RNU2-44P-201ENST00000516795 194 ntBASIC2.12□□□□□ -2.07
BEST1O76090 SNORA59B-202ENST00000578183 701 ntBASIC2.12□□□□□ -2.07
BEST1O76090 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.12□□□□□ -2.07
BEST1O76090 AL627230.6-201ENST00000611129 280 ntBASIC2.12□□□□□ -2.07
BEST1O76090 AL773524.1-201ENST00000614065 229 ntBASIC2.12□□□□□ -2.07
BEST1O76090 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.12□□□□□ -2.07
BEST1O76090 SCARNA4-201ENST00000629045 128 ntBASIC2.12□□□□□ -2.07
BEST1O76090 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
BEST1O76090 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.12□□□□□ -2.07
BEST1O76090 SNORD114-6-201ENST00000364393 72 ntBASIC2.11□□□□□ -2.07
BEST1O76090 RNU6-510P-201ENST00000391239 108 ntBASIC2.11□□□□□ -2.07
BEST1O76090 MIR300-201ENST00000401138 83 ntBASIC2.11□□□□□ -2.07
BEST1O76090 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.11□□□□□ -2.07
BEST1O76090 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC2.11□□□□□ -2.07
BEST1O76090 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.11□□□□□ -2.07
BEST1O76090 RPL23AP7-203ENST00000449021 469 ntBASIC2.11□□□□□ -2.07
BEST1O76090 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC2.11□□□□□ -2.07
BEST1O76090 AC007395.1-201ENST00000451333 677 ntBASIC2.11□□□□□ -2.07
BEST1O76090 AC079354.2-201ENST00000453523 154 ntBASIC2.11□□□□□ -2.07
BEST1O76090 NDUFAF4P4-201ENST00000454883 502 ntBASIC2.11□□□□□ -2.07
BEST1O76090 PMCHL2-203ENST00000457791 237 ntBASIC2.11□□□□□ -2.07
BEST1O76090 RNA5SP454-201ENST00000517231 127 ntBASIC2.11□□□□□ -2.07
BEST1O76090 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.11□□□□□ -2.07
BEST1O76090 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.11□□□□□ -2.07
BEST1O76090 MIR3169-201ENST00000578032 83 ntBASIC2.11□□□□□ -2.07
BEST1O76090 TCL6_2.1-201ENST00000615162 119 ntBASIC2.11□□□□□ -2.07
BEST1O76090 RNU4-9P-201ENST00000364951 139 ntBASIC2.1□□□□□ -2.07
BEST1O76090 SNORA8-201ENST00000384574 139 ntBASIC2.1□□□□□ -2.07
BEST1O76090 MIR320B2-201ENST00000408479 138 ntBASIC2.1□□□□□ -2.07
BEST1O76090 RNU6ATAC25P-201ENST00000408798 117 ntBASIC2.1□□□□□ -2.07
BEST1O76090 Z82205.1-201ENST00000428456 297 ntBASIC2.1□□□□□ -2.07
BEST1O76090 WARS2P1-201ENST00000429678 537 ntBASIC2.1□□□□□ -2.07
BEST1O76090 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.1□□□□□ -2.07
BEST1O76090 RPL23AP6-201ENST00000446637 472 ntBASIC2.1□□□□□ -2.07
BEST1O76090 AL021397.1-201ENST00000451806 248 ntBASIC2.1□□□□□ -2.07
BEST1O76090 AC079804.2-201ENST00000490376 200 ntBASIC2.1□□□□□ -2.07
BEST1O76090 RNU6-566P-201ENST00000516790 107 ntBASIC2.1□□□□□ -2.07
BEST1O76090 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.1□□□□□ -2.07
BEST1O76090 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC2.1□□□□□ -2.07
BEST1O76090 AC016727.2-201ENST00000603988 621 ntBASIC2.1□□□□□ -2.07
BEST1O76090 SNRPGP20-201ENST00000604477 205 ntBASIC2.1□□□□□ -2.07
BEST1O76090 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.1□□□□□ -2.07
BEST1O76090 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.1□□□□□ -2.07
BEST1O76090 U6atac.1-201ENST00000616025 117 ntBASIC2.1□□□□□ -2.07
BEST1O76090 AL590240.4-201ENST00000616908 390 ntBASIC2.1□□□□□ -2.07
BEST1O76090 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
BEST1O76090 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.09□□□□□ -2.07
BEST1O76090 CBX3P1-201ENST00000325243 554 ntBASIC2.09□□□□□ -2.07
BEST1O76090 Y_RNA.132-201ENST00000363421 102 ntBASIC2.09□□□□□ -2.07
BEST1O76090 Y_RNA.301-201ENST00000364990 103 ntBASIC2.09□□□□□ -2.07
BEST1O76090 RNU6-596P-201ENST00000365395 98 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms