Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.11□□□□□ -1.91
CDKL5O76039 HMGN2P10-201ENST00000448085 265 ntBASIC3.11□□□□□ -1.91
CDKL5O76039 RPS29P12-201ENST00000460178 152 ntBASIC3.11□□□□□ -1.91
CDKL5O76039 RNU6-111P-201ENST00000517179 105 ntBASIC3.11□□□□□ -1.91
CDKL5O76039 SNORA31.23-201ENST00000517219 133 ntBASIC3.11□□□□□ -1.91
CDKL5O76039 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.11□□□□□ -1.91
CDKL5O76039 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.11□□□□□ -1.91
CDKL5O76039 ELOCP29-201ENST00000588193 334 ntBASIC3.11□□□□□ -1.91
CDKL5O76039 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.11□□□□□ -1.91
CDKL5O76039 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.11□□□□□ -1.91
CDKL5O76039 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CDKL5O76039 LINC02555-201ENST00000563933 1951 ntBASIC3.11□□□□□ -1.91
CDKL5O76039 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CDKL5O76039 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
CDKL5O76039 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CDKL5O76039 Y_RNA.16-201ENST00000362421 102 ntBASIC3.1□□□□□ -1.91
CDKL5O76039 RNU5B-2P-201ENST00000363036 113 ntBASIC3.1□□□□□ -1.91
CDKL5O76039 SNORD27-201ENST00000363981 72 ntBASIC3.1□□□□□ -1.91
CDKL5O76039 RNU6-318P-201ENST00000384283 103 ntBASIC3.1□□□□□ -1.91
CDKL5O76039 MIR544A-201ENST00000384855 91 ntBASIC3.1□□□□□ -1.91
CDKL5O76039 MIR487A-201ENST00000385009 80 ntBASIC3.1□□□□□ -1.91
CDKL5O76039 NDUFB4P4-201ENST00000404822 243 ntBASIC3.1□□□□□ -1.91
CDKL5O76039 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.1□□□□□ -1.91
CDKL5O76039 AC096920.1-201ENST00000423991 241 ntBASIC3.1□□□□□ -1.91
CDKL5O76039 EIF1P2-201ENST00000428233 350 ntBASIC3.1□□□□□ -1.91
CDKL5O76039 MED28P2-201ENST00000475771 317 ntBASIC3.1□□□□□ -1.91
CDKL5O76039 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC3.1□□□□□ -1.91
CDKL5O76039 SEM1P1-201ENST00000506694 209 ntBASIC3.1□□□□□ -1.91
CDKL5O76039 DEFB108E-201ENST00000524692 240 ntBASIC3.1□□□□□ -1.91
CDKL5O76039 MIR4659A-201ENST00000580269 81 ntBASIC3.1□□□□□ -1.91
CDKL5O76039 HSPE1P7-201ENST00000604681 321 ntBASIC3.1□□□□□ -1.91
CDKL5O76039 Y_RNA.772-201ENST00000606692 102 ntBASIC3.1□□□□□ -1.91
CDKL5O76039 AC073308.1-201ENST00000623696 305 ntBASIC3.1□□□□□ -1.91
CDKL5O76039 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
CDKL5O76039 CUL1P1-201ENST00000509510 2425 ntBASIC3.1□□□□□ -1.91
CDKL5O76039 AC110491.1-201ENST00000562191 2010 ntBASIC3.09□□□□□ -1.91
CDKL5O76039 AL391987.6-201ENST00000305671 199 ntBASIC3.09□□□□□ -1.91
CDKL5O76039 Y_RNA.20-201ENST00000362479 113 ntBASIC3.09□□□□□ -1.91
CDKL5O76039 RNA5SP361-201ENST00000362686 118 ntBASIC3.09□□□□□ -1.91
CDKL5O76039 Y_RNA.416-201ENST00000384014 113 ntBASIC3.09□□□□□ -1.91
CDKL5O76039 SNORA36A-201ENST00000384221 132 ntBASIC3.09□□□□□ -1.91
CDKL5O76039 RNU6-937P-201ENST00000384325 106 ntBASIC3.09□□□□□ -1.91
CDKL5O76039 Y_RNA.504-201ENST00000384481 104 ntBASIC3.09□□□□□ -1.91
CDKL5O76039 Y_RNA.539-201ENST00000384635 107 ntBASIC3.09□□□□□ -1.91
CDKL5O76039 MIR153-2-201ENST00000385225 87 ntBASIC3.09□□□□□ -1.91
CDKL5O76039 RNA5SP213-201ENST00000391031 106 ntBASIC3.09□□□□□ -1.91
CDKL5O76039 RNU1-139P-201ENST00000391307 165 ntBASIC3.09□□□□□ -1.91
CDKL5O76039 MRPL35P1-201ENST00000404272 572 ntBASIC3.09□□□□□ -1.91
CDKL5O76039 RNU2-64P-201ENST00000411315 191 ntBASIC3.09□□□□□ -1.91
CDKL5O76039 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.09□□□□□ -1.91
CDKL5O76039 AP001025.1-201ENST00000486139 332 ntBASIC3.09□□□□□ -1.91
CDKL5O76039 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.09□□□□□ -1.91
CDKL5O76039 AC006199.1-201ENST00000548728 219 ntBASIC3.09□□□□□ -1.91
CDKL5O76039 AC079600.2-201ENST00000550076 130 ntBASIC3.09□□□□□ -1.91
CDKL5O76039 AC027288.2-201ENST00000553028 243 ntBASIC3.09□□□□□ -1.91
CDKL5O76039 AC021739.1-201ENST00000559631 174 ntBASIC3.09□□□□□ -1.91
CDKL5O76039 AC009163.5-201ENST00000575421 637 ntBASIC3.09□□□□□ -1.91
CDKL5O76039 HMGN2P15-201ENST00000585707 270 ntBASIC3.09□□□□□ -1.91
CDKL5O76039 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.09□□□□□ -1.91
CDKL5O76039 ADAM3A-203ENST00000461344 2157 ntBASIC3.09□□□□□ -1.91
CDKL5O76039 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.08□□□□□ -1.92
CDKL5O76039 MIR335-201ENST00000362173 94 ntBASIC3.08□□□□□ -1.92
CDKL5O76039 RNU6-879P-201ENST00000364328 108 ntBASIC3.08□□□□□ -1.92
CDKL5O76039 RNU6-926P-201ENST00000384075 107 ntBASIC3.08□□□□□ -1.92
CDKL5O76039 U8.10-201ENST00000384260 133 ntBASIC3.08□□□□□ -1.92
CDKL5O76039 Y_RNA.478-201ENST00000384358 107 ntBASIC3.08□□□□□ -1.92
CDKL5O76039 RNU6-843P-201ENST00000384454 104 ntBASIC3.08□□□□□ -1.92
CDKL5O76039 Y_RNA.515-201ENST00000384535 112 ntBASIC3.08□□□□□ -1.92
CDKL5O76039 Y_RNA.541-201ENST00000384640 113 ntBASIC3.08□□□□□ -1.92
CDKL5O76039 RPS4XP3-201ENST00000398541 413 ntBASIC3.08□□□□□ -1.92
CDKL5O76039 MIR548I3-201ENST00000408378 149 ntBASIC3.08□□□□□ -1.92
CDKL5O76039 MIR548H3-201ENST00000408771 118 ntBASIC3.08□□□□□ -1.92
CDKL5O76039 MIR548I1-201ENST00000408810 149 ntBASIC3.08□□□□□ -1.92
CDKL5O76039 AC004383.1-201ENST00000438135 289 ntBASIC3.08□□□□□ -1.92
CDKL5O76039 RPS15AP7-201ENST00000439294 405 ntBASIC3.08□□□□□ -1.92
CDKL5O76039 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC3.08□□□□□ -1.92
CDKL5O76039 RNU6-1114P-201ENST00000516022 107 ntBASIC3.08□□□□□ -1.92
CDKL5O76039 HSPE1P4-201ENST00000550617 308 ntBASIC3.08□□□□□ -1.92
CDKL5O76039 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC3.08□□□□□ -1.92
CDKL5O76039 MIR5571-201ENST00000577998 113 ntBASIC3.08□□□□□ -1.92
CDKL5O76039 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.08□□□□□ -1.92
CDKL5O76039 AC011471.1-201ENST00000585766 187 ntBASIC3.08□□□□□ -1.92
CDKL5O76039 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CDKL5O76039 Z82195.2-201ENST00000612348 18351 ntBASIC3.07□□□□□ -1.92
CDKL5O76039 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.07□□□□□ -1.92
CDKL5O76039 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.07□□□□□ -1.92
CDKL5O76039 RNU6-799P-201ENST00000363567 107 ntBASIC3.07□□□□□ -1.92
CDKL5O76039 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
CDKL5O76039 RNU6-338P-201ENST00000383888 105 ntBASIC3.07□□□□□ -1.92
CDKL5O76039 RNU6-102P-201ENST00000384485 104 ntBASIC3.07□□□□□ -1.92
CDKL5O76039 Y_RNA.581-201ENST00000391017 97 ntBASIC3.07□□□□□ -1.92
CDKL5O76039 Y_RNA.602-201ENST00000410535 92 ntBASIC3.07□□□□□ -1.92
CDKL5O76039 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.07□□□□□ -1.92
CDKL5O76039 AL445305.1-201ENST00000432577 575 ntBASIC3.07□□□□□ -1.92
CDKL5O76039 GPM6BP3-201ENST00000442797 145 ntBASIC3.07□□□□□ -1.92
CDKL5O76039 AC016700.2-201ENST00000446011 156 ntBASIC3.07□□□□□ -1.92
CDKL5O76039 RNU6-138P-201ENST00000515952 107 ntBASIC3.07□□□□□ -1.92
CDKL5O76039 RNU6-1338P-201ENST00000516328 91 ntBASIC3.07□□□□□ -1.92
CDKL5O76039 ACA59.2-201ENST00000517061 156 ntBASIC3.07□□□□□ -1.92
CDKL5O76039 NACAP3-201ENST00000552100 481 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms