Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 GTF2IP20-201ENST00000431663 360 ntBASIC-0.33□□□□□ -2.46
USH2AO75445 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC-0.33□□□□□ -2.46
USH2AO75445 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC-0.33□□□□□ -2.46
USH2AO75445 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC-0.33□□□□□ -2.46
USH2AO75445 AL512310.8-201ENST00000550183 120 ntBASIC-0.33□□□□□ -2.46
USH2AO75445 AL355816.2-201ENST00000610049 647 ntBASIC-0.33□□□□□ -2.46
USH2AO75445 RNU6-819P-201ENST00000364116 107 ntBASIC-0.34□□□□□ -2.46
USH2AO75445 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.34□□□□□ -2.46
USH2AO75445 Y_RNA.423-201ENST00000384057 113 ntBASIC-0.34□□□□□ -2.46
USH2AO75445 Y_RNA.525-201ENST00000384570 113 ntBASIC-0.34□□□□□ -2.46
USH2AO75445 RNU6-1127P-201ENST00000384580 107 ntBASIC-0.34□□□□□ -2.46
USH2AO75445 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC-0.34□□□□□ -2.46
USH2AO75445 AC016907.1-201ENST00000419483 435 ntBASIC-0.34□□□□□ -2.46
USH2AO75445 DNAJA1P2-201ENST00000421360 1197 ntBASIC-0.34□□□□□ -2.46
USH2AO75445 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC-0.34□□□□□ -2.46
USH2AO75445 CEP57L1P1-201ENST00000430943 1201 ntBASIC-0.34□□□□□ -2.46
USH2AO75445 ERLEC1P1-201ENST00000433806 578 ntBASIC-0.34□□□□□ -2.46
USH2AO75445 RNU2-60P-201ENST00000517290 128 ntBASIC-0.34□□□□□ -2.46
USH2AO75445 COPS8P3-201ENST00000526024 482 ntBASIC-0.34□□□□□ -2.46
USH2AO75445 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC-0.34□□□□□ -2.46
USH2AO75445 AC026271.5-201ENST00000577873 130 ntBASIC-0.34□□□□□ -2.46
USH2AO75445 AL713998.2-201ENST00000604538 1198 ntBASIC-0.34□□□□□ -2.46
USH2AO75445 MIR6864-201ENST00000617935 70 ntBASIC-0.34□□□□□ -2.46
USH2AO75445 RNU6-230P-201ENST00000362457 104 ntBASIC-0.34□□□□□ -2.46
USH2AO75445 Y_RNA.483-201ENST00000384380 101 ntBASIC-0.34□□□□□ -2.46
USH2AO75445 RNU6-705P-201ENST00000410601 104 ntBASIC-0.34□□□□□ -2.46
USH2AO75445 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC-0.34□□□□□ -2.46
USH2AO75445 MTND2P24-201ENST00000453434 806 ntBASIC-0.34□□□□□ -2.46
USH2AO75445 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC-0.34□□□□□ -2.46
USH2AO75445 RNA5SP169-201ENST00000517268 117 ntBASIC-0.34□□□□□ -2.46
USH2AO75445 MIR1273C-201ENST00000578669 77 ntBASIC-0.34□□□□□ -2.46
USH2AO75445 AC068790.2-201ENST00000602601 557 ntBASIC-0.34□□□□□ -2.46
USH2AO75445 AC004775.1-201ENST00000607389 753 ntBASIC-0.34□□□□□ -2.46
USH2AO75445 RNU4-23P-201ENST00000362839 140 ntBASIC-0.34□□□□□ -2.46
USH2AO75445 Y_RNA.244-201ENST00000364484 109 ntBASIC-0.34□□□□□ -2.46
USH2AO75445 RNU6-702P-201ENST00000364982 107 ntBASIC-0.34□□□□□ -2.46
USH2AO75445 Y_RNA.419-201ENST00000384041 102 ntBASIC-0.34□□□□□ -2.46
USH2AO75445 Y_RNA.443-201ENST00000384135 111 ntBASIC-0.34□□□□□ -2.46
USH2AO75445 MIR181B2-201ENST00000385004 89 ntBASIC-0.34□□□□□ -2.46
USH2AO75445 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC-0.34□□□□□ -2.46
USH2AO75445 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC-0.34□□□□□ -2.46
USH2AO75445 MTND5P2-201ENST00000442927 1142 ntBASIC-0.34□□□□□ -2.46
USH2AO75445 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC-0.34□□□□□ -2.46
USH2AO75445 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC-0.34□□□□□ -2.46
USH2AO75445 AC022868.1-201ENST00000517767 391 ntBASIC-0.34□□□□□ -2.46
USH2AO75445 AC022784.5-201ENST00000522241 437 ntBASIC-0.34□□□□□ -2.46
USH2AO75445 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC-0.34□□□□□ -2.46
USH2AO75445 ROCK1P1-201ENST00000573767 549 ntBASIC-0.34□□□□□ -2.46
USH2AO75445 AC093726.3-201ENST00000637588 150 ntBASIC-0.34□□□□□ -2.46
USH2AO75445 RNU6-1128P-201ENST00000362825 109 ntBASIC-0.34□□□□□ -2.46
USH2AO75445 RNU6-811P-201ENST00000384069 107 ntBASIC-0.34□□□□□ -2.46
USH2AO75445 RNU6-1035P-201ENST00000384477 107 ntBASIC-0.34□□□□□ -2.46
USH2AO75445 MIR760-201ENST00000390220 80 ntBASIC-0.34□□□□□ -2.46
USH2AO75445 AL139098.1-201ENST00000407291 389 ntBASIC-0.34□□□□□ -2.46
USH2AO75445 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC-0.34□□□□□ -2.46
USH2AO75445 RPL23AP50-201ENST00000434149 455 ntBASIC-0.34□□□□□ -2.46
USH2AO75445 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC-0.34□□□□□ -2.46
USH2AO75445 snoU13.7-201ENST00000459220 104 ntBASIC-0.34□□□□□ -2.46
USH2AO75445 RNU6-165P-201ENST00000517170 99 ntBASIC-0.34□□□□□ -2.46
USH2AO75445 AC125232.2-201ENST00000592457 143 ntBASIC-0.34□□□□□ -2.46
USH2AO75445 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC-0.34□□□□□ -2.46
USH2AO75445 AL136363.2-201ENST00000604173 851 ntBASIC-0.34□□□□□ -2.46
USH2AO75445 AL034555.1-201ENST00000604816 211 ntBASIC-0.34□□□□□ -2.46
USH2AO75445 AP002360.4-201ENST00000606980 481 ntBASIC-0.34□□□□□ -2.46
USH2AO75445 AC063944.3-201ENST00000609969 533 ntBASIC-0.34□□□□□ -2.46
USH2AO75445 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC-0.34□□□□□ -2.46
USH2AO75445 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC-0.34□□□□□ -2.46
USH2AO75445 Y_RNA.2-201ENST00000362330 96 ntBASIC-0.35□□□□□ -2.46
USH2AO75445 RNU6-1331P-201ENST00000363658 106 ntBASIC-0.35□□□□□ -2.46
USH2AO75445 RNU6-194P-201ENST00000363862 105 ntBASIC-0.35□□□□□ -2.46
USH2AO75445 RNU6-987P-201ENST00000384759 104 ntBASIC-0.35□□□□□ -2.46
USH2AO75445 RNU6-796P-201ENST00000391086 107 ntBASIC-0.35□□□□□ -2.46
USH2AO75445 AC078974.1-201ENST00000411597 223 ntBASIC-0.35□□□□□ -2.46
USH2AO75445 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC-0.35□□□□□ -2.46
USH2AO75445 RAC1P6-201ENST00000423911 575 ntBASIC-0.35□□□□□ -2.46
USH2AO75445 FO393419.3-201ENST00000428741 282 ntBASIC-0.35□□□□□ -2.46
USH2AO75445 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC-0.35□□□□□ -2.46
USH2AO75445 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC-0.35□□□□□ -2.46
USH2AO75445 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC-0.35□□□□□ -2.46
USH2AO75445 LARP7P4-201ENST00000481075 878 ntBASIC-0.35□□□□□ -2.46
USH2AO75445 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC-0.35□□□□□ -2.46
USH2AO75445 SNORA25.16-201ENST00000516741 121 ntBASIC-0.35□□□□□ -2.46
USH2AO75445 snoU83B.1-201ENST00000517136 88 ntBASIC-0.35□□□□□ -2.46
USH2AO75445 AC246785.4-201ENST00000605374 287 ntBASIC-0.35□□□□□ -2.46
USH2AO75445 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC-0.35□□□□□ -2.46
USH2AO75445 Y_RNA.370-201ENST00000365589 108 ntBASIC-0.35□□□□□ -2.47
USH2AO75445 SNORD14D-201ENST00000384390 87 ntBASIC-0.35□□□□□ -2.47
USH2AO75445 SNORA2B-201ENST00000384583 137 ntBASIC-0.35□□□□□ -2.47
USH2AO75445 AC003071.1-201ENST00000451219 789 ntBASIC-0.35□□□□□ -2.47
USH2AO75445 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC-0.35□□□□□ -2.47
USH2AO75445 AF235103.2-201ENST00000525753 346 ntBASIC-0.35□□□□□ -2.47
USH2AO75445 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC-0.35□□□□□ -2.47
USH2AO75445 AC098483.2-201ENST00000603158 454 ntBASIC-0.35□□□□□ -2.47
USH2AO75445 AP000860.1-201ENST00000605250 559 ntBASIC-0.35□□□□□ -2.47
USH2AO75445 AC092953.2-201ENST00000608000 699 ntBASIC-0.35□□□□□ -2.47
USH2AO75445 U8.6-201ENST00000364939 135 ntBASIC-0.35□□□□□ -2.47
USH2AO75445 Y_RNA.302-201ENST00000364997 102 ntBASIC-0.35□□□□□ -2.47
USH2AO75445 RNU6-821P-201ENST00000390995 107 ntBASIC-0.35□□□□□ -2.47
USH2AO75445 MTATP6P31-201ENST00000406985 692 ntBASIC-0.35□□□□□ -2.47
USH2AO75445 AL161935.2-201ENST00000414627 60 ntBASIC-0.35□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 123.4 ms