Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC0.67□□□□□ -2.3
SCN2BO60939 PCMTD1P2-201ENST00000565017 355 ntBASIC0.67□□□□□ -2.3
SCN2BO60939 MIR4742-201ENST00000581069 85 ntBASIC0.67□□□□□ -2.3
SCN2BO60939 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC0.67□□□□□ -2.3
SCN2BO60939 AC136443.5-201ENST00000603741 370 ntBASIC0.67□□□□□ -2.3
SCN2BO60939 AC108706.1-201ENST00000611053 297 ntBASIC0.67□□□□□ -2.3
SCN2BO60939 MTND5P17-201ENST00000418405 1603 ntBASIC0.67□□□□□ -2.3
SCN2BO60939 RNU1-93P-201ENST00000364704 169 ntBASIC0.66□□□□□ -2.3
SCN2BO60939 SNORD115-7-201ENST00000365306 82 ntBASIC0.66□□□□□ -2.3
SCN2BO60939 SNORA36A-201ENST00000384221 132 ntBASIC0.66□□□□□ -2.3
SCN2BO60939 RNU6-1235P-201ENST00000384559 107 ntBASIC0.66□□□□□ -2.3
SCN2BO60939 RNU6-1093P-201ENST00000391194 107 ntBASIC0.66□□□□□ -2.3
SCN2BO60939 MIR1253-201ENST00000408273 105 ntBASIC0.66□□□□□ -2.3
SCN2BO60939 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.66□□□□□ -2.3
SCN2BO60939 RPS3AP1-201ENST00000413190 320 ntBASIC0.66□□□□□ -2.3
SCN2BO60939 AL008987.1-201ENST00000415528 237 ntBASIC0.66□□□□□ -2.3
SCN2BO60939 AC114482.1-201ENST00000418010 247 ntBASIC0.66□□□□□ -2.3
SCN2BO60939 AC002429.1-201ENST00000437672 148 ntBASIC0.66□□□□□ -2.3
SCN2BO60939 RNU6-498P-201ENST00000459468 107 ntBASIC0.66□□□□□ -2.3
SCN2BO60939 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC0.66□□□□□ -2.3
SCN2BO60939 RAP1BP2-201ENST00000478270 544 ntBASIC0.66□□□□□ -2.3
SCN2BO60939 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.66□□□□□ -2.3
SCN2BO60939 FAM106DP-201ENST00000586416 501 ntBASIC0.66□□□□□ -2.3
SCN2BO60939 AC009159.2-201ENST00000617603 606 ntBASIC0.66□□□□□ -2.3
SCN2BO60939 MIR6835-201ENST00000621552 64 ntBASIC0.66□□□□□ -2.3
SCN2BO60939 RNU6-501P-201ENST00000364072 100 ntBASIC0.65□□□□□ -2.31
SCN2BO60939 SNORD114-22-201ENST00000365423 72 ntBASIC0.65□□□□□ -2.31
SCN2BO60939 SNORA20.2-201ENST00000383922 131 ntBASIC0.65□□□□□ -2.31
SCN2BO60939 MIR520E-201ENST00000384867 87 ntBASIC0.65□□□□□ -2.31
SCN2BO60939 RPL21P1-201ENST00000399532 476 ntBASIC0.65□□□□□ -2.31
SCN2BO60939 MIR1276-201ENST00000408707 83 ntBASIC0.65□□□□□ -2.31
SCN2BO60939 AC012306.1-201ENST00000423267 114 ntBASIC0.65□□□□□ -2.31
SCN2BO60939 MTND5P15-201ENST00000434246 349 ntBASIC0.65□□□□□ -2.31
SCN2BO60939 AC074290.1-201ENST00000448883 135 ntBASIC0.65□□□□□ -2.31
SCN2BO60939 AL031274.1-201ENST00000450334 232 ntBASIC0.65□□□□□ -2.31
SCN2BO60939 AC117454.1-201ENST00000491120 168 ntBASIC0.65□□□□□ -2.31
SCN2BO60939 NAF1-205ENST00000509434 385 ntTSL 3 BASIC0.65□□□□□ -2.31
SCN2BO60939 SCARNA24.1-201ENST00000516465 137 ntBASIC0.65□□□□□ -2.31
SCN2BO60939 RN7SKP49-201ENST00000516675 260 ntBASIC0.65□□□□□ -2.31
SCN2BO60939 AC022616.3-201ENST00000523940 148 ntBASIC0.65□□□□□ -2.31
SCN2BO60939 AC011604.1-201ENST00000545978 196 ntBASIC0.65□□□□□ -2.31
SCN2BO60939 AC004817.2-201ENST00000561794 651 ntBASIC0.65□□□□□ -2.31
SCN2BO60939 AL929325.1-201ENST00000603096 117 ntBASIC0.65□□□□□ -2.31
SCN2BO60939 AC021506.2-201ENST00000612354 169 ntBASIC0.65□□□□□ -2.31
SCN2BO60939 MIR8070-201ENST00000616510 88 ntBASIC0.65□□□□□ -2.31
SCN2BO60939 AC009878.1-201ENST00000621819 340 ntBASIC0.65□□□□□ -2.31
SCN2BO60939 AL450472.1-202ENST00000637286 180 ntBASIC0.65□□□□□ -2.31
SCN2BO60939 AC099654.13-201ENST00000639774 207 ntBASIC0.65□□□□□ -2.31
SCN2BO60939 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC0.65□□□□□ -2.31
SCN2BO60939 Y_RNA.124-201ENST00000363339 93 ntBASIC0.64□□□□□ -2.31
SCN2BO60939 RNU6-715P-201ENST00000365204 103 ntBASIC0.64□□□□□ -2.31
SCN2BO60939 MIR942-201ENST00000401111 86 ntBASIC0.64□□□□□ -2.31
SCN2BO60939 RN7SKP200-201ENST00000410564 320 ntBASIC0.64□□□□□ -2.31
SCN2BO60939 HSFY7P-201ENST00000432672 318 ntBASIC0.64□□□□□ -2.31
SCN2BO60939 HMGN2P34-201ENST00000437647 269 ntBASIC0.64□□□□□ -2.31
SCN2BO60939 HSFY8P-201ENST00000437934 318 ntBASIC0.64□□□□□ -2.31
SCN2BO60939 SRRM1P2-201ENST00000464531 1192 ntBASIC0.64□□□□□ -2.31
SCN2BO60939 UBE2V1P12-201ENST00000503954 474 ntBASIC0.64□□□□□ -2.31
SCN2BO60939 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC0.64□□□□□ -2.31
SCN2BO60939 MTCO3P7-201ENST00000510008 774 ntBASIC0.64□□□□□ -2.31
SCN2BO60939 DEFB108E-201ENST00000524692 240 ntBASIC0.64□□□□□ -2.31
SCN2BO60939 AL121579.1-201ENST00000555129 305 ntBASIC0.64□□□□□ -2.31
SCN2BO60939 AP000811.1-201ENST00000603803 651 ntBASIC0.64□□□□□ -2.31
SCN2BO60939 AL590095.2-201ENST00000604136 117 ntBASIC0.64□□□□□ -2.31
SCN2BO60939 AC027807.2-201ENST00000616099 408 ntBASIC0.64□□□□□ -2.31
SCN2BO60939 AC009509.4-201ENST00000619202 509 ntBASIC0.64□□□□□ -2.31
SCN2BO60939 AL078595.3-201ENST00000623815 1166 ntBASIC0.64□□□□□ -2.31
SCN2BO60939 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.64□□□□□ -2.31
SCN2BO60939 AC007671.2-201ENST00000637344 619 ntBASIC0.64□□□□□ -2.31
SCN2BO60939 Y_RNA.191-201ENST00000363972 113 ntBASIC0.63□□□□□ -2.31
SCN2BO60939 SNORA25.9-201ENST00000365087 128 ntBASIC0.63□□□□□ -2.31
SCN2BO60939 Y_RNA.480-201ENST00000384364 102 ntBASIC0.63□□□□□ -2.31
SCN2BO60939 RNU6-1031P-201ENST00000384773 107 ntBASIC0.63□□□□□ -2.31
SCN2BO60939 MIR513B-201ENST00000385136 84 ntBASIC0.63□□□□□ -2.31
SCN2BO60939 CDK8P2-201ENST00000415020 547 ntBASIC0.63□□□□□ -2.31
SCN2BO60939 AL117339.3-201ENST00000418733 162 ntBASIC0.63□□□□□ -2.31
SCN2BO60939 AC104850.1-201ENST00000435940 476 ntBASIC0.63□□□□□ -2.31
SCN2BO60939 TAF9P1-201ENST00000445421 515 ntBASIC0.63□□□□□ -2.31
SCN2BO60939 AL606662.1-201ENST00000445763 553 ntBASIC0.63□□□□□ -2.31
SCN2BO60939 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.63□□□□□ -2.31
SCN2BO60939 TAF9P2-201ENST00000454958 515 ntBASIC0.63□□□□□ -2.31
SCN2BO60939 AL162395.1-201ENST00000457882 422 ntBASIC0.63□□□□□ -2.31
SCN2BO60939 AC048334.1-201ENST00000477975 159 ntBASIC0.63□□□□□ -2.31
SCN2BO60939 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC0.63□□□□□ -2.31
SCN2BO60939 SNORD79.1-201ENST00000516069 84 ntBASIC0.63□□□□□ -2.31
SCN2BO60939 Y_RNA.672-201ENST00000516289 104 ntBASIC0.63□□□□□ -2.31
SCN2BO60939 DEFB131C-201ENST00000528817 165 ntBASIC0.63□□□□□ -2.31
SCN2BO60939 AL590705.4-201ENST00000532209 134 ntBASIC0.63□□□□□ -2.31
SCN2BO60939 AC007834.2-201ENST00000536310 343 ntBASIC0.63□□□□□ -2.31
SCN2BO60939 AC138749.5-201ENST00000611461 208 ntBASIC0.63□□□□□ -2.31
SCN2BO60939 MIR6504-201ENST00000613520 61 ntBASIC0.63□□□□□ -2.31
SCN2BO60939 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.63□□□□□ -2.31
SCN2BO60939 AC116165.2-201ENST00000616705 206 ntBASIC0.63□□□□□ -2.31
SCN2BO60939 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0.63□□□□□ -2.31
SCN2BO60939 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.63□□□□□ -2.31
SCN2BO60939 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
SCN2BO60939 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.62□□□□□ -2.31
SCN2BO60939 RNU6-17P-201ENST00000384245 107 ntBASIC0.62□□□□□ -2.31
SCN2BO60939 RNU6-110P-201ENST00000384508 104 ntBASIC0.62□□□□□ -2.31
SCN2BO60939 RNU6-18P-201ENST00000384527 107 ntBASIC0.62□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 218.6 ms