Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.94□□□□□ -2.26
SHOX2O60902 AC099654.13-201ENST00000639774 207 ntBASIC0.94□□□□□ -2.26
SHOX2O60902 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC0.94□□□□□ -2.26
SHOX2O60902 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.94□□□□□ -2.26
SHOX2O60902 RNU6-1287P-201ENST00000362914 107 ntBASIC0.93□□□□□ -2.26
SHOX2O60902 Y_RNA.132-201ENST00000363421 102 ntBASIC0.93□□□□□ -2.26
SHOX2O60902 RNU5F-7P-201ENST00000363696 115 ntBASIC0.93□□□□□ -2.26
SHOX2O60902 Y_RNA.280-201ENST00000364765 112 ntBASIC0.93□□□□□ -2.26
SHOX2O60902 RNU6-1060P-201ENST00000384664 107 ntBASIC0.93□□□□□ -2.26
SHOX2O60902 MIR513B-201ENST00000385136 84 ntBASIC0.93□□□□□ -2.26
SHOX2O60902 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.93□□□□□ -2.26
SHOX2O60902 RNU6-550P-201ENST00000391057 101 ntBASIC0.93□□□□□ -2.26
SHOX2O60902 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC0.93□□□□□ -2.26
SHOX2O60902 SNAP23P1-201ENST00000433229 246 ntBASIC0.93□□□□□ -2.26
SHOX2O60902 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC0.93□□□□□ -2.26
SHOX2O60902 AC132479.1-201ENST00000449160 144 ntBASIC0.93□□□□□ -2.26
SHOX2O60902 snoU13.19-201ENST00000459148 104 ntBASIC0.93□□□□□ -2.26
SHOX2O60902 AC010531.2-201ENST00000465012 153 ntBASIC0.93□□□□□ -2.26
SHOX2O60902 RPS23P5-201ENST00000495419 428 ntBASIC0.93□□□□□ -2.26
SHOX2O60902 RNU6-856P-201ENST00000516959 98 ntBASIC0.93□□□□□ -2.26
SHOX2O60902 RNU6-410P-201ENST00000517006 107 ntBASIC0.93□□□□□ -2.26
SHOX2O60902 RNA5SP404-201ENST00000517118 132 ntBASIC0.93□□□□□ -2.26
SHOX2O60902 AL512310.8-201ENST00000550183 120 ntBASIC0.93□□□□□ -2.26
SHOX2O60902 AC021231.3-201ENST00000558497 370 ntBASIC0.93□□□□□ -2.26
SHOX2O60902 AC005771.1-201ENST00000585581 349 ntBASIC0.93□□□□□ -2.26
SHOX2O60902 AC091805.2-201ENST00000603848 235 ntBASIC0.93□□□□□ -2.26
SHOX2O60902 AC211469.2-201ENST00000605461 205 ntBASIC0.93□□□□□ -2.26
SHOX2O60902 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.93□□□□□ -2.26
SHOX2O60902 AC027807.2-201ENST00000616099 408 ntBASIC0.93□□□□□ -2.26
SHOX2O60902 AC009159.2-201ENST00000617603 606 ntBASIC0.93□□□□□ -2.26
SHOX2O60902 MIR338-201ENST00000636369 67 ntBASIC0.93□□□□□ -2.26
SHOX2O60902 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
SHOX2O60902 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
SHOX2O60902 SNORA72.2-201ENST00000365028 127 ntBASIC0.92□□□□□ -2.26
SHOX2O60902 RNU6-715P-201ENST00000365204 103 ntBASIC0.92□□□□□ -2.26
SHOX2O60902 Y_RNA.480-201ENST00000384364 102 ntBASIC0.92□□□□□ -2.26
SHOX2O60902 COX6CP10-201ENST00000416832 224 ntBASIC0.92□□□□□ -2.26
SHOX2O60902 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC0.92□□□□□ -2.26
SHOX2O60902 DYNLT3P2-201ENST00000442517 295 ntBASIC0.92□□□□□ -2.26
SHOX2O60902 AC079781.2-201ENST00000446424 169 ntBASIC0.92□□□□□ -2.26
SHOX2O60902 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.92□□□□□ -2.26
SHOX2O60902 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.92□□□□□ -2.26
SHOX2O60902 AC103851.1-201ENST00000506833 274 ntBASIC0.92□□□□□ -2.26
SHOX2O60902 AC105313.1-201ENST00000509121 353 ntBASIC0.92□□□□□ -2.26
SHOX2O60902 RNU2-34P-201ENST00000516534 121 ntBASIC0.92□□□□□ -2.26
SHOX2O60902 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC0.92□□□□□ -2.26
SHOX2O60902 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.92□□□□□ -2.26
SHOX2O60902 AC078795.3-201ENST00000602913 472 ntBASIC0.92□□□□□ -2.26
SHOX2O60902 AC005520.5-201ENST00000613926 164 ntBASIC0.92□□□□□ -2.26
SHOX2O60902 MESTIT1_1.1-201ENST00000618871 140 ntBASIC0.92□□□□□ -2.26
SHOX2O60902 AL078595.3-201ENST00000623815 1166 ntBASIC0.92□□□□□ -2.26
SHOX2O60902 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
SHOX2O60902 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.91□□□□□ -2.26
SHOX2O60902 Y_RNA.48-201ENST00000362710 103 ntBASIC0.91□□□□□ -2.26
SHOX2O60902 RNU6-552P-201ENST00000362869 119 ntBASIC0.91□□□□□ -2.26
SHOX2O60902 RNU6-428P-201ENST00000362942 107 ntBASIC0.91□□□□□ -2.26
SHOX2O60902 RNU6-169P-201ENST00000365336 107 ntBASIC0.91□□□□□ -2.26
SHOX2O60902 MIR146A-201ENST00000385201 99 ntBASIC0.91□□□□□ -2.26
SHOX2O60902 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.91□□□□□ -2.26
SHOX2O60902 SSR1P2-201ENST00000415208 787 ntBASIC0.91□□□□□ -2.26
SHOX2O60902 AL356583.2-201ENST00000426536 280 ntBASIC0.91□□□□□ -2.26
SHOX2O60902 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC0.91□□□□□ -2.26
SHOX2O60902 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.91□□□□□ -2.26
SHOX2O60902 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC0.91□□□□□ -2.26
SHOX2O60902 HSPE1P13-201ENST00000451143 297 ntBASIC0.91□□□□□ -2.26
SHOX2O60902 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC0.91□□□□□ -2.26
SHOX2O60902 RNU6-1178P-201ENST00000516674 107 ntBASIC0.91□□□□□ -2.26
SHOX2O60902 Vault.3-201ENST00000516676 95 ntBASIC0.91□□□□□ -2.26
SHOX2O60902 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC0.91□□□□□ -2.26
SHOX2O60902 AC146944.4-201ENST00000602697 718 ntBASIC0.91□□□□□ -2.26
SHOX2O60902 Z98751.3-201ENST00000604447 521 ntBASIC0.91□□□□□ -2.26
SHOX2O60902 AC064807.4-201ENST00000607201 407 ntBASIC0.91□□□□□ -2.26
SHOX2O60902 AC091304.9-201ENST00000612091 226 ntBASIC0.91□□□□□ -2.26
SHOX2O60902 uc_338.11-201ENST00000619132 160 ntBASIC0.91□□□□□ -2.26
SHOX2O60902 AC012676.2-201ENST00000619258 186 ntBASIC0.91□□□□□ -2.26
SHOX2O60902 AC009033.1-201ENST00000624279 431 ntBASIC0.91□□□□□ -2.26
SHOX2O60902 AC007671.2-201ENST00000637344 619 ntBASIC0.91□□□□□ -2.26
SHOX2O60902 AC106754.1-201ENST00000562632 1513 ntBASIC0.9□□□□□ -2.26
SHOX2O60902 RNU6-968P-201ENST00000384076 107 ntBASIC0.9□□□□□ -2.27
SHOX2O60902 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.9□□□□□ -2.27
SHOX2O60902 AL117342.1-201ENST00000404861 406 ntBASIC0.9□□□□□ -2.27
SHOX2O60902 RNU4-46P-201ENST00000410818 138 ntBASIC0.9□□□□□ -2.27
SHOX2O60902 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.9□□□□□ -2.27
SHOX2O60902 HMGN1P14-201ENST00000412459 517 ntBASIC0.9□□□□□ -2.27
SHOX2O60902 AL117339.3-201ENST00000418733 162 ntBASIC0.9□□□□□ -2.27
SHOX2O60902 SNRPEP10-201ENST00000420249 274 ntBASIC0.9□□□□□ -2.27
SHOX2O60902 GTF2IP13-201ENST00000438487 386 ntBASIC0.9□□□□□ -2.27
SHOX2O60902 AC073614.1-201ENST00000438690 650 ntBASIC0.9□□□□□ -2.27
SHOX2O60902 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC0.9□□□□□ -2.27
SHOX2O60902 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.9□□□□□ -2.27
SHOX2O60902 AC114982.1-201ENST00000469402 321 ntBASIC0.9□□□□□ -2.27
SHOX2O60902 RPS26P45-201ENST00000471748 340 ntBASIC0.9□□□□□ -2.27
SHOX2O60902 AC087343.1-201ENST00000477341 475 ntBASIC0.9□□□□□ -2.27
SHOX2O60902 NAF1-205ENST00000509434 385 ntTSL 3 BASIC0.9□□□□□ -2.27
SHOX2O60902 AC067942.3-201ENST00000512025 362 ntBASIC0.9□□□□□ -2.27
SHOX2O60902 RN7SKP88-201ENST00000516847 250 ntBASIC0.9□□□□□ -2.27
SHOX2O60902 RNU6-1220P-201ENST00000517126 108 ntBASIC0.9□□□□□ -2.27
SHOX2O60902 AC090572.1-201ENST00000519251 160 ntBASIC0.9□□□□□ -2.27
SHOX2O60902 AP003461.1-201ENST00000528866 78 ntBASIC0.9□□□□□ -2.27
SHOX2O60902 ELOCP32-201ENST00000548625 324 ntBASIC0.9□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 409.9 ms