Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 BNIP3P22-201ENST00000593399 556 ntBASIC1.99□□□□□ -2.09
SNX3O60493 AL158827.2-201ENST00000602494 330 ntBASIC1.99□□□□□ -2.09
SNX3O60493 AC012493.3-201ENST00000604494 112 ntBASIC1.99□□□□□ -2.09
SNX3O60493 AC025754.2-201ENST00000606491 432 ntBASIC1.99□□□□□ -2.09
SNX3O60493 uc_338.5-201ENST00000611839 155 ntBASIC1.99□□□□□ -2.09
SNX3O60493 SCARNA4-201ENST00000629045 128 ntBASIC1.99□□□□□ -2.09
SNX3O60493 AL691447.3-201ENST00000635020 330 ntBASIC1.99□□□□□ -2.09
SNX3O60493 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
SNX3O60493 CENPCP1-201ENST00000533085 2578 ntBASIC1.99□□□□□ -2.09
SNX3O60493 Y_RNA.88-201ENST00000363029 99 ntBASIC1.98□□□□□ -2.09
SNX3O60493 Y_RNA.303-201ENST00000364998 94 ntBASIC1.98□□□□□ -2.09
SNX3O60493 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
SNX3O60493 SNORA18.2-201ENST00000383865 132 ntBASIC1.98□□□□□ -2.09
SNX3O60493 U8.10-201ENST00000384260 133 ntBASIC1.98□□□□□ -2.09
SNX3O60493 SNORD14D-201ENST00000384390 87 ntBASIC1.98□□□□□ -2.09
SNX3O60493 MIR196B-201ENST00000384852 84 ntBASIC1.98□□□□□ -2.09
SNX3O60493 AL357139.1-201ENST00000407792 426 ntBASIC1.98□□□□□ -2.09
SNX3O60493 RPL37P10-201ENST00000412884 288 ntBASIC1.98□□□□□ -2.09
SNX3O60493 AC009963.1-201ENST00000417265 157 ntBASIC1.98□□□□□ -2.09
SNX3O60493 AC027124.2-201ENST00000428249 105 ntBASIC1.98□□□□□ -2.09
SNX3O60493 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC1.98□□□□□ -2.09
SNX3O60493 IPO7P1-201ENST00000442031 636 ntBASIC1.98□□□□□ -2.09
SNX3O60493 AL109933.2-201ENST00000452651 260 ntBASIC1.98□□□□□ -2.09
SNX3O60493 MTND4P17-201ENST00000470444 350 ntBASIC1.98□□□□□ -2.09
SNX3O60493 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.98□□□□□ -2.09
SNX3O60493 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.98□□□□□ -2.09
SNX3O60493 AC011494.1-201ENST00000596454 237 ntBASIC1.98□□□□□ -2.09
SNX3O60493 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.98□□□□□ -2.09
SNX3O60493 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.98□□□□□ -2.09
SNX3O60493 AL359314.1-201ENST00000616913 261 ntBASIC1.98□□□□□ -2.09
SNX3O60493 TPTEP1-208ENST00000636884 213 ntBASIC1.98□□□□□ -2.09
SNX3O60493 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
SNX3O60493 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
SNX3O60493 Y_RNA.48-201ENST00000362710 103 ntBASIC1.97□□□□□ -2.09
SNX3O60493 RNU6-525P-201ENST00000363685 104 ntBASIC1.97□□□□□ -2.09
SNX3O60493 RNU6-593P-201ENST00000364716 112 ntBASIC1.97□□□□□ -2.09
SNX3O60493 RNU4-9P-201ENST00000364951 139 ntBASIC1.97□□□□□ -2.09
SNX3O60493 RNU6-601P-201ENST00000384540 107 ntBASIC1.97□□□□□ -2.09
SNX3O60493 NDUFB4P4-201ENST00000404822 243 ntBASIC1.97□□□□□ -2.09
SNX3O60493 AL356432.1-201ENST00000405809 419 ntBASIC1.97□□□□□ -2.09
SNX3O60493 Y_RNA.594-201ENST00000410373 140 ntBASIC1.97□□□□□ -2.09
SNX3O60493 AC243428.1-201ENST00000421099 264 ntBASIC1.97□□□□□ -2.09
SNX3O60493 AL035666.1-201ENST00000446195 348 ntBASIC1.97□□□□□ -2.09
SNX3O60493 RNU7-14P-201ENST00000459331 62 ntBASIC1.97□□□□□ -2.09
SNX3O60493 TOMM22P6-201ENST00000465035 409 ntBASIC1.97□□□□□ -2.09
SNX3O60493 Y_RNA.670-201ENST00000516255 105 ntBASIC1.97□□□□□ -2.09
SNX3O60493 RNA5SP281-201ENST00000516504 135 ntBASIC1.97□□□□□ -2.09
SNX3O60493 RNU5F-4P-201ENST00000516581 114 ntBASIC1.97□□□□□ -2.09
SNX3O60493 Y_RNA.691-201ENST00000516611 103 ntBASIC1.97□□□□□ -2.09
SNX3O60493 MIR514B-201ENST00000516774 80 ntBASIC1.97□□□□□ -2.09
SNX3O60493 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.97□□□□□ -2.09
SNX3O60493 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.97□□□□□ -2.09
SNX3O60493 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC1.97□□□□□ -2.09
SNX3O60493 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC1.97□□□□□ -2.09
SNX3O60493 AL355073.2-201ENST00000612106 557 ntBASIC1.97□□□□□ -2.09
SNX3O60493 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.96□□□□□ -2.1
SNX3O60493 AL359851.1-201ENST00000569460 4997 ntBASIC1.96□□□□□ -2.1
SNX3O60493 RNU1-76P-201ENST00000362903 159 ntBASIC1.96□□□□□ -2.1
SNX3O60493 RNU6-1164P-201ENST00000364428 107 ntBASIC1.96□□□□□ -2.1
SNX3O60493 SNORA16B-201ENST00000364674 135 ntBASIC1.96□□□□□ -2.1
SNX3O60493 XGY1-201ENST00000381172 446 ntBASIC1.96□□□□□ -2.1
SNX3O60493 MIR32-201ENST00000384965 70 ntBASIC1.96□□□□□ -2.1
SNX3O60493 MIR518A2-201ENST00000384966 87 ntBASIC1.96□□□□□ -2.1
SNX3O60493 RNU6-1050P-201ENST00000410388 107 ntBASIC1.96□□□□□ -2.1
SNX3O60493 RNU4-14P-201ENST00000410858 122 ntBASIC1.96□□□□□ -2.1
SNX3O60493 Z92545.1-201ENST00000411782 234 ntBASIC1.96□□□□□ -2.1
SNX3O60493 AL139156.1-201ENST00000412785 841 ntBASIC1.96□□□□□ -2.1
SNX3O60493 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.96□□□□□ -2.1
SNX3O60493 MTND3P10-201ENST00000450967 341 ntBASIC1.96□□□□□ -2.1
SNX3O60493 AC108938.1-201ENST00000451204 136 ntBASIC1.96□□□□□ -2.1
SNX3O60493 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.96□□□□□ -2.1
SNX3O60493 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.96□□□□□ -2.1
SNX3O60493 RPS23P5-201ENST00000495419 428 ntBASIC1.96□□□□□ -2.1
SNX3O60493 AL117351.2-201ENST00000513571 157 ntBASIC1.96□□□□□ -2.1
SNX3O60493 RNU2-44P-201ENST00000516795 194 ntBASIC1.96□□□□□ -2.1
SNX3O60493 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.96□□□□□ -2.1
SNX3O60493 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.96□□□□□ -2.1
SNX3O60493 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.96□□□□□ -2.1
SNX3O60493 MIR5089-201ENST00000580047 84 ntBASIC1.96□□□□□ -2.1
SNX3O60493 AC005730.3-201ENST00000583067 366 ntBASIC1.96□□□□□ -2.1
SNX3O60493 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.96□□□□□ -2.1
SNX3O60493 AC137590.2-201ENST00000619709 240 ntBASIC1.96□□□□□ -2.1
SNX3O60493 Y_RNA.99-201ENST00000363138 105 ntBASIC1.95□□□□□ -2.1
SNX3O60493 SNORA72.1-201ENST00000363485 129 ntBASIC1.95□□□□□ -2.1
SNX3O60493 Y_RNA.482-201ENST00000384377 111 ntBASIC1.95□□□□□ -2.1
SNX3O60493 MIR29C-201ENST00000385231 88 ntBASIC1.95□□□□□ -2.1
SNX3O60493 SNORA12.2-201ENST00000391040 156 ntBASIC1.95□□□□□ -2.1
SNX3O60493 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC1.95□□□□□ -2.1
SNX3O60493 RN7SKP284-201ENST00000411002 343 ntBASIC1.95□□□□□ -2.1
SNX3O60493 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.95□□□□□ -2.1
SNX3O60493 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.95□□□□□ -2.1
SNX3O60493 BX510359.4-201ENST00000423750 193 ntBASIC1.95□□□□□ -2.1
SNX3O60493 AC245102.2-201ENST00000448956 180 ntBASIC1.95□□□□□ -2.1
SNX3O60493 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.95□□□□□ -2.1
SNX3O60493 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.95□□□□□ -2.1
SNX3O60493 snoU13.30-201ENST00000458951 104 ntBASIC1.95□□□□□ -2.1
SNX3O60493 AC007215.1-201ENST00000464893 276 ntBASIC1.95□□□□□ -2.1
SNX3O60493 AC055731.1-201ENST00000474387 401 ntBASIC1.95□□□□□ -2.1
SNX3O60493 RPL30P10-201ENST00000488148 337 ntBASIC1.95□□□□□ -2.1
SNX3O60493 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 145.8 ms