Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 AL590556.1-201ENST00000423231 483 ntBASIC1.76□□□□□ -2.13
LCMT2O60294 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.76□□□□□ -2.13
LCMT2O60294 NFU1P2-201ENST00000448700 469 ntBASIC1.76□□□□□ -2.13
LCMT2O60294 snoU13.6-201ENST00000458785 104 ntBASIC1.76□□□□□ -2.13
LCMT2O60294 RNA5SP57-201ENST00000459463 123 ntBASIC1.76□□□□□ -2.13
LCMT2O60294 U8.21-201ENST00000459536 136 ntBASIC1.76□□□□□ -2.13
LCMT2O60294 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.76□□□□□ -2.13
LCMT2O60294 AC096745.1-201ENST00000509945 370 ntBASIC1.76□□□□□ -2.13
LCMT2O60294 RNU6-273P-201ENST00000516937 96 ntBASIC1.76□□□□□ -2.13
LCMT2O60294 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.76□□□□□ -2.13
LCMT2O60294 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.76□□□□□ -2.13
LCMT2O60294 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.76□□□□□ -2.13
LCMT2O60294 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.76□□□□□ -2.13
LCMT2O60294 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.76□□□□□ -2.13
LCMT2O60294 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.76□□□□□ -2.13
LCMT2O60294 AC109446.1-201ENST00000566172 220 ntBASIC1.76□□□□□ -2.13
LCMT2O60294 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.76□□□□□ -2.13
LCMT2O60294 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.76□□□□□ -2.13
LCMT2O60294 MIR3923-201ENST00000579521 83 ntBASIC1.76□□□□□ -2.13
LCMT2O60294 AC023043.2-201ENST00000589678 1026 ntBASIC1.76□□□□□ -2.13
LCMT2O60294 AC146944.4-201ENST00000602697 718 ntBASIC1.76□□□□□ -2.13
LCMT2O60294 AL133215.3-201ENST00000609801 448 ntBASIC1.76□□□□□ -2.13
LCMT2O60294 AC084782.3-201ENST00000612282 578 ntBASIC1.76□□□□□ -2.13
LCMT2O60294 AL136221.1-201ENST00000621449 509 ntBASIC1.76□□□□□ -2.13
LCMT2O60294 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
LCMT2O60294 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
LCMT2O60294 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
LCMT2O60294 RNU6-562P-201ENST00000362731 107 ntBASIC1.75□□□□□ -2.13
LCMT2O60294 Y_RNA.157-201ENST00000363638 102 ntBASIC1.75□□□□□ -2.13
LCMT2O60294 SNORA16.1-201ENST00000364597 132 ntBASIC1.75□□□□□ -2.13
LCMT2O60294 SNORA29-201ENST00000384183 140 ntBASIC1.75□□□□□ -2.13
LCMT2O60294 MIR597-201ENST00000384968 97 ntBASIC1.75□□□□□ -2.13
LCMT2O60294 MIR9-3-201ENST00000385084 90 ntBASIC1.75□□□□□ -2.13
LCMT2O60294 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
LCMT2O60294 MIR1294-201ENST00000408503 142 ntBASIC1.75□□□□□ -2.13
LCMT2O60294 RNA5SP489-201ENST00000410986 109 ntBASIC1.75□□□□□ -2.13
LCMT2O60294 AC012306.1-201ENST00000423267 114 ntBASIC1.75□□□□□ -2.13
LCMT2O60294 AL645568.3-201ENST00000433683 316 ntBASIC1.75□□□□□ -2.13
LCMT2O60294 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.75□□□□□ -2.13
LCMT2O60294 TRBVA-201ENST00000498804 316 ntBASIC1.75□□□□□ -2.13
LCMT2O60294 HMGB3P17-201ENST00000504195 649 ntBASIC1.75□□□□□ -2.13
LCMT2O60294 AC107393.1-201ENST00000512403 346 ntBASIC1.75□□□□□ -2.13
LCMT2O60294 RNU6-864P-201ENST00000516256 108 ntBASIC1.75□□□□□ -2.13
LCMT2O60294 RNU6-1088P-201ENST00000516850 104 ntBASIC1.75□□□□□ -2.13
LCMT2O60294 MTND4LP26-201ENST00000518144 282 ntBASIC1.75□□□□□ -2.13
LCMT2O60294 AC021231.3-201ENST00000558497 370 ntBASIC1.75□□□□□ -2.13
LCMT2O60294 MIR3122-201ENST00000577243 73 ntBASIC1.75□□□□□ -2.13
LCMT2O60294 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.75□□□□□ -2.13
LCMT2O60294 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.75□□□□□ -2.13
LCMT2O60294 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.75□□□□□ -2.13
LCMT2O60294 AC006504.8-201ENST00000621046 635 ntBASIC1.75□□□□□ -2.13
LCMT2O60294 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
LCMT2O60294 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.74□□□□□ -2.13
LCMT2O60294 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
LCMT2O60294 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
LCMT2O60294 Y_RNA.86-201ENST00000363020 111 ntBASIC1.74□□□□□ -2.13
LCMT2O60294 RNU6-1164P-201ENST00000364428 107 ntBASIC1.74□□□□□ -2.13
LCMT2O60294 SNORD116-11-201ENST00000383882 92 ntBASIC1.74□□□□□ -2.13
LCMT2O60294 SNORA32.2-201ENST00000384049 122 ntBASIC1.74□□□□□ -2.13
LCMT2O60294 RNA5SP212-201ENST00000391223 107 ntBASIC1.74□□□□□ -2.13
LCMT2O60294 RNA5SP118-201ENST00000410385 109 ntBASIC1.74□□□□□ -2.13
LCMT2O60294 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.74□□□□□ -2.13
LCMT2O60294 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.74□□□□□ -2.13
LCMT2O60294 AC093259.1-201ENST00000509755 300 ntBASIC1.74□□□□□ -2.13
LCMT2O60294 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.74□□□□□ -2.13
LCMT2O60294 RNU6-991P-201ENST00000516168 107 ntBASIC1.74□□□□□ -2.13
LCMT2O60294 CYP4A27P-201ENST00000567218 190 ntBASIC1.74□□□□□ -2.13
LCMT2O60294 AL022345.1-201ENST00000607292 135 ntBASIC1.74□□□□□ -2.13
LCMT2O60294 MIR8076-201ENST00000611401 83 ntBASIC1.74□□□□□ -2.13
LCMT2O60294 AC009033.1-201ENST00000624279 431 ntBASIC1.74□□□□□ -2.13
LCMT2O60294 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
LCMT2O60294 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.73□□□□□ -2.13
LCMT2O60294 RNU5B-2P-201ENST00000363036 113 ntBASIC1.73□□□□□ -2.13
LCMT2O60294 RNU4-56P-201ENST00000364700 142 ntBASIC1.73□□□□□ -2.13
LCMT2O60294 MIR583-201ENST00000384846 75 ntBASIC1.73□□□□□ -2.13
LCMT2O60294 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC1.73□□□□□ -2.13
LCMT2O60294 RNU2-41P-201ENST00000410991 178 ntBASIC1.73□□□□□ -2.13
LCMT2O60294 RPL30P16-201ENST00000419341 429 ntBASIC1.73□□□□□ -2.13
LCMT2O60294 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.73□□□□□ -2.13
LCMT2O60294 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.73□□□□□ -2.13
LCMT2O60294 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.73□□□□□ -2.13
LCMT2O60294 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.73□□□□□ -2.13
LCMT2O60294 AC116337.1-201ENST00000509680 687 ntBASIC1.73□□□□□ -2.13
LCMT2O60294 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
LCMT2O60294 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC1.73□□□□□ -2.13
LCMT2O60294 RNU4-49P-201ENST00000516080 140 ntBASIC1.73□□□□□ -2.13
LCMT2O60294 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.73□□□□□ -2.13
LCMT2O60294 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.73□□□□□ -2.13
LCMT2O60294 AP003465.2-201ENST00000602571 373 ntBASIC1.73□□□□□ -2.13
LCMT2O60294 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.73□□□□□ -2.13
LCMT2O60294 MIR6845-201ENST00000613182 61 ntBASIC1.73□□□□□ -2.13
LCMT2O60294 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.73□□□□□ -2.13
LCMT2O60294 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.72□□□□□ -2.13
LCMT2O60294 RNU1-58P-201ENST00000362413 163 ntBASIC1.72□□□□□ -2.13
LCMT2O60294 SNORD50.1-201ENST00000362987 71 ntBASIC1.72□□□□□ -2.13
LCMT2O60294 U3.9-201ENST00000363823 204 ntBASIC1.72□□□□□ -2.13
LCMT2O60294 Y_RNA.301-201ENST00000364990 103 ntBASIC1.72□□□□□ -2.13
LCMT2O60294 RNU6-1286P-201ENST00000383871 107 ntBASIC1.72□□□□□ -2.13
LCMT2O60294 RNU6-26P-201ENST00000383985 107 ntBASIC1.72□□□□□ -2.13
LCMT2O60294 RNU6-933P-201ENST00000384424 107 ntBASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms