Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 RNU2-41P-201ENST00000410991 178 ntBASIC2.15□□□□□ -2.07
SSX4O60224 EDDM3CP-201ENST00000415977 425 ntBASIC2.15□□□□□ -2.07
SSX4O60224 AC010095.1-201ENST00000443543 144 ntBASIC2.15□□□□□ -2.07
SSX4O60224 AC132942.1-201ENST00000486753 483 ntBASIC2.15□□□□□ -2.07
SSX4O60224 AC079804.2-201ENST00000490376 200 ntBASIC2.15□□□□□ -2.07
SSX4O60224 AC008549.1-201ENST00000512900 643 ntBASIC2.15□□□□□ -2.07
SSX4O60224 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.15□□□□□ -2.07
SSX4O60224 CBX3P8-201ENST00000532412 525 ntBASIC2.15□□□□□ -2.07
SSX4O60224 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.15□□□□□ -2.07
SSX4O60224 AC233702.2-202ENST00000562547 291 ntBASIC2.15□□□□□ -2.07
SSX4O60224 AC090517.1-201ENST00000569307 266 ntBASIC2.15□□□□□ -2.07
SSX4O60224 RPS3AP23-202ENST00000574601 686 ntBASIC2.15□□□□□ -2.07
SSX4O60224 AC113139.1-201ENST00000605049 239 ntBASIC2.15□□□□□ -2.07
SSX4O60224 AL132765.2-201ENST00000610812 351 ntBASIC2.15□□□□□ -2.07
SSX4O60224 PISRT1.1-201ENST00000616930 107 ntBASIC2.15□□□□□ -2.07
SSX4O60224 AC137590.2-201ENST00000619709 240 ntBASIC2.15□□□□□ -2.07
SSX4O60224 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
SSX4O60224 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.15□□□□□ -2.07
SSX4O60224 ZNF299P-201ENST00000406845 1804 ntBASIC2.14□□□□□ -2.07
SSX4O60224 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
SSX4O60224 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.14□□□□□ -2.07
SSX4O60224 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
SSX4O60224 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
SSX4O60224 AL596028.1-201ENST00000326971 197 ntBASIC2.14□□□□□ -2.07
SSX4O60224 RNA5SP289-201ENST00000362332 137 ntBASIC2.14□□□□□ -2.07
SSX4O60224 RNU6-595P-201ENST00000363944 107 ntBASIC2.14□□□□□ -2.07
SSX4O60224 RNU6-234P-201ENST00000365229 104 ntBASIC2.14□□□□□ -2.07
SSX4O60224 MIR32-201ENST00000384965 70 ntBASIC2.14□□□□□ -2.07
SSX4O60224 MIR487A-201ENST00000385009 80 ntBASIC2.14□□□□□ -2.07
SSX4O60224 RNU6-370P-201ENST00000411008 104 ntBASIC2.14□□□□□ -2.07
SSX4O60224 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.14□□□□□ -2.07
SSX4O60224 AC093019.1-201ENST00000443135 252 ntBASIC2.14□□□□□ -2.07
SSX4O60224 snoU13.30-201ENST00000458951 104 ntBASIC2.14□□□□□ -2.07
SSX4O60224 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.14□□□□□ -2.07
SSX4O60224 RNU6-277P-201ENST00000516272 106 ntBASIC2.14□□□□□ -2.07
SSX4O60224 RNA5SP384-201ENST00000516615 116 ntBASIC2.14□□□□□ -2.07
SSX4O60224 RNU6-1213P-201ENST00000517075 94 ntBASIC2.14□□□□□ -2.07
SSX4O60224 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC2.14□□□□□ -2.07
SSX4O60224 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.14□□□□□ -2.07
SSX4O60224 AC016727.2-201ENST00000603988 621 ntBASIC2.14□□□□□ -2.07
SSX4O60224 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.14□□□□□ -2.07
SSX4O60224 AC025253.1-201ENST00000613623 543 ntBASIC2.14□□□□□ -2.07
SSX4O60224 AC098657.3-201ENST00000620434 263 ntBASIC2.14□□□□□ -2.07
SSX4O60224 AC012640.5-201ENST00000623897 319 ntBASIC2.14□□□□□ -2.07
SSX4O60224 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
SSX4O60224 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.14□□□□□ -2.07
SSX4O60224 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
SSX4O60224 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
SSX4O60224 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.13□□□□□ -2.07
SSX4O60224 ZNF658B-202ENST00000615961 3375 ntBASIC2.13□□□□□ -2.07
SSX4O60224 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
SSX4O60224 Y_RNA.70-201ENST00000362886 110 ntBASIC2.13□□□□□ -2.07
SSX4O60224 U8.10-201ENST00000384260 133 ntBASIC2.13□□□□□ -2.07
SSX4O60224 RNU6-331P-201ENST00000384724 107 ntBASIC2.13□□□□□ -2.07
SSX4O60224 MIR549A-201ENST00000385268 96 ntBASIC2.13□□□□□ -2.07
SSX4O60224 SNORA3.2-201ENST00000408221 125 ntBASIC2.13□□□□□ -2.07
SSX4O60224 RNA5SP338-201ENST00000410495 85 ntBASIC2.13□□□□□ -2.07
SSX4O60224 RNU4-53P-201ENST00000410828 140 ntBASIC2.13□□□□□ -2.07
SSX4O60224 RNU6-1304P-201ENST00000411374 106 ntBASIC2.13□□□□□ -2.07
SSX4O60224 Z98742.3-201ENST00000418637 326 ntBASIC2.13□□□□□ -2.07
SSX4O60224 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.13□□□□□ -2.07
SSX4O60224 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.13□□□□□ -2.07
SSX4O60224 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.13□□□□□ -2.07
SSX4O60224 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.13□□□□□ -2.07
SSX4O60224 PRELID3BP1-201ENST00000457142 540 ntBASIC2.13□□□□□ -2.07
SSX4O60224 RPL30P10-201ENST00000488148 337 ntBASIC2.13□□□□□ -2.07
SSX4O60224 RN7SL636P-201ENST00000497504 294 ntBASIC2.13□□□□□ -2.07
SSX4O60224 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.13□□□□□ -2.07
SSX4O60224 RNU1-41P-201ENST00000516161 162 ntBASIC2.13□□□□□ -2.07
SSX4O60224 RNU1-48P-201ENST00000516400 162 ntBASIC2.13□□□□□ -2.07
SSX4O60224 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.13□□□□□ -2.07
SSX4O60224 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.13□□□□□ -2.07
SSX4O60224 SNRPGP17-201ENST00000603780 214 ntBASIC2.13□□□□□ -2.07
SSX4O60224 AL669831.3-213ENST00000636676 183 ntBASIC2.13□□□□□ -2.07
SSX4O60224 SNORD115-32-201ENST00000364079 82 ntBASIC2.12□□□□□ -2.07
SSX4O60224 Y_RNA.263-201ENST00000364659 114 ntBASIC2.12□□□□□ -2.07
SSX4O60224 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC2.12□□□□□ -2.07
SSX4O60224 SNORA18.2-201ENST00000383865 132 ntBASIC2.12□□□□□ -2.07
SSX4O60224 USMG5P1-201ENST00000425964 177 ntBASIC2.12□□□□□ -2.07
SSX4O60224 AC027124.2-201ENST00000428249 105 ntBASIC2.12□□□□□ -2.07
SSX4O60224 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.12□□□□□ -2.07
SSX4O60224 AL137159.1-201ENST00000452808 512 ntBASIC2.12□□□□□ -2.07
SSX4O60224 RN7SKP210-201ENST00000459176 261 ntBASIC2.12□□□□□ -2.07
SSX4O60224 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.12□□□□□ -2.07
SSX4O60224 RNU6-559P-201ENST00000516151 98 ntBASIC2.12□□□□□ -2.07
SSX4O60224 RNU6-1098P-201ENST00000516772 96 ntBASIC2.12□□□□□ -2.07
SSX4O60224 AC134698.4-201ENST00000523451 826 ntBASIC2.12□□□□□ -2.07
SSX4O60224 DEFB131C-201ENST00000528817 165 ntBASIC2.12□□□□□ -2.07
SSX4O60224 AL590705.4-201ENST00000532209 134 ntBASIC2.12□□□□□ -2.07
SSX4O60224 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.12□□□□□ -2.07
SSX4O60224 APOOP3-201ENST00000536787 586 ntBASIC2.12□□□□□ -2.07
SSX4O60224 7SK.7-201ENST00000603504 247 ntBASIC2.12□□□□□ -2.07
SSX4O60224 RNU6ATAC35P-201ENST00000609276 444 ntBASIC2.12□□□□□ -2.07
SSX4O60224 RMST_6.1-201ENST00000611980 203 ntBASIC2.12□□□□□ -2.07
SSX4O60224 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.12□□□□□ -2.07
SSX4O60224 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.12□□□□□ -2.07
SSX4O60224 MIR1302-1-201ENST00000637932 143 ntBASIC2.12□□□□□ -2.07
SSX4O60224 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
SSX4O60224 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
SSX4O60224 RNU6-1188P-201ENST00000363795 107 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms