Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.36□□□□□ -1.87
PRICKLE3O43900 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
PRICKLE3O43900 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
PRICKLE3O43900 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.35□□□□□ -1.87
PRICKLE3O43900 RNU4-35P-201ENST00000362588 141 ntBASIC3.35□□□□□ -1.87
PRICKLE3O43900 RNU6-942P-201ENST00000363002 107 ntBASIC3.35□□□□□ -1.87
PRICKLE3O43900 RNU6-1056P-201ENST00000383996 107 ntBASIC3.35□□□□□ -1.87
PRICKLE3O43900 RNU6-376P-201ENST00000384731 106 ntBASIC3.35□□□□□ -1.87
PRICKLE3O43900 MIR513C-201ENST00000401352 84 ntBASIC3.35□□□□□ -1.87
PRICKLE3O43900 AL138878.1-201ENST00000405131 347 ntBASIC3.35□□□□□ -1.87
PRICKLE3O43900 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.35□□□□□ -1.87
PRICKLE3O43900 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.35□□□□□ -1.87
PRICKLE3O43900 AC010095.1-201ENST00000443543 144 ntBASIC3.35□□□□□ -1.87
PRICKLE3O43900 AC115115.1-201ENST00000449927 248 ntBASIC3.35□□□□□ -1.87
PRICKLE3O43900 RNU6-1211P-201ENST00000459179 105 ntBASIC3.35□□□□□ -1.87
PRICKLE3O43900 AC025518.1-201ENST00000479856 347 ntBASIC3.35□□□□□ -1.87
PRICKLE3O43900 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.35□□□□□ -1.87
PRICKLE3O43900 RPL30P5-201ENST00000494923 336 ntBASIC3.35□□□□□ -1.87
PRICKLE3O43900 Y_RNA.797-201ENST00000515977 94 ntBASIC3.35□□□□□ -1.87
PRICKLE3O43900 AP004607.1-201ENST00000524456 203 ntBASIC3.35□□□□□ -1.87
PRICKLE3O43900 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
PRICKLE3O43900 AC022616.8-201ENST00000533569 253 ntBASIC3.35□□□□□ -1.87
PRICKLE3O43900 CYCSP26-201ENST00000534107 320 ntBASIC3.35□□□□□ -1.87
PRICKLE3O43900 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.35□□□□□ -1.87
PRICKLE3O43900 CYCSP39-201ENST00000565821 309 ntBASIC3.35□□□□□ -1.87
PRICKLE3O43900 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
PRICKLE3O43900 AC093010.3-201ENST00000570269 15214 ntBASIC3.35□□□□□ -1.87
PRICKLE3O43900 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
PRICKLE3O43900 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.35□□□□□ -1.87
PRICKLE3O43900 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
PRICKLE3O43900 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
PRICKLE3O43900 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
PRICKLE3O43900 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
PRICKLE3O43900 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
PRICKLE3O43900 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
PRICKLE3O43900 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
PRICKLE3O43900 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.34□□□□□ -1.87
PRICKLE3O43900 SNORA72.2-201ENST00000365028 127 ntBASIC3.34□□□□□ -1.87
PRICKLE3O43900 MIR490-201ENST00000384865 128 ntBASIC3.34□□□□□ -1.87
PRICKLE3O43900 AL590383.1-201ENST00000428602 75 ntBASIC3.34□□□□□ -1.87
PRICKLE3O43900 AC007919.1-201ENST00000429380 217 ntBASIC3.34□□□□□ -1.87
PRICKLE3O43900 RPS29P31-201ENST00000446147 164 ntBASIC3.34□□□□□ -1.87
PRICKLE3O43900 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.34□□□□□ -1.87
PRICKLE3O43900 RN7SL601P-201ENST00000471221 293 ntBASIC3.34□□□□□ -1.87
PRICKLE3O43900 RNU6-659P-201ENST00000516454 104 ntBASIC3.34□□□□□ -1.87
PRICKLE3O43900 RNU6-703P-201ENST00000516946 107 ntBASIC3.34□□□□□ -1.87
PRICKLE3O43900 IGKV2-26-201ENST00000518305 343 ntBASIC3.34□□□□□ -1.87
PRICKLE3O43900 AL670379.2-201ENST00000604983 252 ntBASIC3.34□□□□□ -1.87
PRICKLE3O43900 AC010999.1-201ENST00000611856 324 ntBASIC3.34□□□□□ -1.87
PRICKLE3O43900 TUG1_4.1-201ENST00000619464 181 ntBASIC3.34□□□□□ -1.87
PRICKLE3O43900 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.34□□□□□ -1.87
PRICKLE3O43900 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
PRICKLE3O43900 AC110774.1-201ENST00000623567 2018 ntBASIC3.34□□□□□ -1.88
PRICKLE3O43900 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
PRICKLE3O43900 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
PRICKLE3O43900 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.88
PRICKLE3O43900 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.34□□□□□ -1.88
PRICKLE3O43900 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
PRICKLE3O43900 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PRICKLE3O43900 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.33□□□□□ -1.88
PRICKLE3O43900 Z98749.2-208ENST00000381646 500 ntBASIC3.33□□□□□ -1.88
PRICKLE3O43900 Y_RNA.542-201ENST00000384641 111 ntBASIC3.33□□□□□ -1.88
PRICKLE3O43900 SNORA20-201ENST00000384662 132 ntBASIC3.33□□□□□ -1.88
PRICKLE3O43900 SNORA1.3-201ENST00000384676 136 ntBASIC3.33□□□□□ -1.88
PRICKLE3O43900 MIR518D-201ENST00000385014 87 ntBASIC3.33□□□□□ -1.88
PRICKLE3O43900 RNU6-578P-201ENST00000390980 103 ntBASIC3.33□□□□□ -1.88
PRICKLE3O43900 RNU6-1245P-201ENST00000411130 106 ntBASIC3.33□□□□□ -1.88
PRICKLE3O43900 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC3.33□□□□□ -1.88
PRICKLE3O43900 AL357552.1-201ENST00000445254 415 ntBASIC3.33□□□□□ -1.88
PRICKLE3O43900 RPS20P10-201ENST00000451209 253 ntBASIC3.33□□□□□ -1.88
PRICKLE3O43900 AL121594.1-201ENST00000475906 575 ntBASIC3.33□□□□□ -1.88
PRICKLE3O43900 KC877373.1-201ENST00000479066 408 ntBASIC3.33□□□□□ -1.88
PRICKLE3O43900 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC3.33□□□□□ -1.88
PRICKLE3O43900 AC107027.2-201ENST00000512197 115 ntBASIC3.33□□□□□ -1.88
PRICKLE3O43900 RN7SKP164-201ENST00000516138 266 ntBASIC3.33□□□□□ -1.88
PRICKLE3O43900 SNORA72.7-201ENST00000516349 94 ntBASIC3.33□□□□□ -1.88
PRICKLE3O43900 RNA5SP54-201ENST00000516951 92 ntBASIC3.33□□□□□ -1.88
PRICKLE3O43900 AC018448.1-201ENST00000552843 316 ntBASIC3.33□□□□□ -1.88
PRICKLE3O43900 MIR4744-201ENST00000581563 82 ntBASIC3.33□□□□□ -1.88
PRICKLE3O43900 DEFB117-201ENST00000602356 141 ntBASIC3.33□□□□□ -1.88
PRICKLE3O43900 AC136601.2-201ENST00000604356 474 ntBASIC3.33□□□□□ -1.88
PRICKLE3O43900 Y_RNA.802-201ENST00000614892 130 ntBASIC3.33□□□□□ -1.88
PRICKLE3O43900 AC004467.1-201ENST00000615678 330 ntBASIC3.33□□□□□ -1.88
PRICKLE3O43900 AC002076.2-201ENST00000617362 122 ntBASIC3.33□□□□□ -1.88
PRICKLE3O43900 MIR6076-201ENST00000617521 113 ntBASIC3.33□□□□□ -1.88
PRICKLE3O43900 AC024581.2-201ENST00000619986 252 ntBASIC3.33□□□□□ -1.88
PRICKLE3O43900 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PRICKLE3O43900 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.33□□□□□ -1.88
PRICKLE3O43900 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
PRICKLE3O43900 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.32□□□□□ -1.88
PRICKLE3O43900 RNU6-1255P-201ENST00000363434 112 ntBASIC3.32□□□□□ -1.88
PRICKLE3O43900 RNU6-103P-201ENST00000363686 107 ntBASIC3.32□□□□□ -1.88
PRICKLE3O43900 RNA5SP50-201ENST00000363731 107 ntBASIC3.32□□□□□ -1.88
PRICKLE3O43900 Y_RNA.172-201ENST00000363765 102 ntBASIC3.32□□□□□ -1.88
PRICKLE3O43900 RNU5F-3P-201ENST00000363767 117 ntBASIC3.32□□□□□ -1.88
PRICKLE3O43900 Y_RNA.420-201ENST00000384043 110 ntBASIC3.32□□□□□ -1.88
PRICKLE3O43900 RNY4P18-201ENST00000391107 89 ntBASIC3.32□□□□□ -1.88
PRICKLE3O43900 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.32□□□□□ -1.88
PRICKLE3O43900 RHEBP3-201ENST00000411920 351 ntBASIC3.32□□□□□ -1.88
PRICKLE3O43900 AC138623.1-201ENST00000418060 216 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 124.6 ms