Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 MIR186-201ENST00000384988 86 ntBASIC2.52□□□□□ -2.01
LDB2O43679 MIR27B-201ENST00000385129 97 ntBASIC2.52□□□□□ -2.01
LDB2O43679 RPL19P1-201ENST00000411635 428 ntBASIC2.52□□□□□ -2.01
LDB2O43679 EEF1B2P7-201ENST00000451177 676 ntBASIC2.52□□□□□ -2.01
LDB2O43679 RNU7-169P-201ENST00000459456 61 ntBASIC2.52□□□□□ -2.01
LDB2O43679 RPL31P41-201ENST00000477967 372 ntBASIC2.52□□□□□ -2.01
LDB2O43679 RPL22P13-201ENST00000493291 347 ntBASIC2.52□□□□□ -2.01
LDB2O43679 RNU5F-2P-201ENST00000516066 82 ntBASIC2.52□□□□□ -2.01
LDB2O43679 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC2.52□□□□□ -2.01
LDB2O43679 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.52□□□□□ -2.01
LDB2O43679 AC016727.2-201ENST00000603988 621 ntBASIC2.52□□□□□ -2.01
LDB2O43679 AC104695.3-201ENST00000604052 296 ntBASIC2.52□□□□□ -2.01
LDB2O43679 Z98751.3-201ENST00000604447 521 ntBASIC2.52□□□□□ -2.01
LDB2O43679 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
LDB2O43679 RNA5SP68-201ENST00000363885 119 ntBASIC2.51□□□□□ -2.01
LDB2O43679 RNU4-56P-201ENST00000364700 142 ntBASIC2.51□□□□□ -2.01
LDB2O43679 Y_RNA.389-201ENST00000383924 113 ntBASIC2.51□□□□□ -2.01
LDB2O43679 Y_RNA.424-201ENST00000384063 103 ntBASIC2.51□□□□□ -2.01
LDB2O43679 Y_RNA.459-201ENST00000384251 102 ntBASIC2.51□□□□□ -2.01
LDB2O43679 Y_RNA.526-201ENST00000384572 110 ntBASIC2.51□□□□□ -2.01
LDB2O43679 MIR32-201ENST00000384965 70 ntBASIC2.51□□□□□ -2.01
LDB2O43679 MIR627-201ENST00000384979 97 ntBASIC2.51□□□□□ -2.01
LDB2O43679 MIR628-201ENST00000385229 95 ntBASIC2.51□□□□□ -2.01
LDB2O43679 RNU6-101P-201ENST00000410323 104 ntBASIC2.51□□□□□ -2.01
LDB2O43679 RNU2-25P-201ENST00000411041 191 ntBASIC2.51□□□□□ -2.01
LDB2O43679 RNA5SP508-201ENST00000411327 119 ntBASIC2.51□□□□□ -2.01
LDB2O43679 RPS26P42-201ENST00000413485 326 ntBASIC2.51□□□□□ -2.01
LDB2O43679 AC012306.1-201ENST00000423267 114 ntBASIC2.51□□□□□ -2.01
LDB2O43679 AIMP1P2-201ENST00000425294 312 ntBASIC2.51□□□□□ -2.01
LDB2O43679 OR2AQ1P-201ENST00000451972 200 ntBASIC2.51□□□□□ -2.01
LDB2O43679 HMGB1P35-201ENST00000503360 598 ntBASIC2.51□□□□□ -2.01
LDB2O43679 AC093852.1-201ENST00000503587 266 ntBASIC2.51□□□□□ -2.01
LDB2O43679 ANXA2P1-201ENST00000505539 926 ntBASIC2.51□□□□□ -2.01
LDB2O43679 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.51□□□□□ -2.01
LDB2O43679 SCARNA17.1-201ENST00000516211 143 ntBASIC2.51□□□□□ -2.01
LDB2O43679 RNA5SP320-201ENST00000516263 124 ntBASIC2.51□□□□□ -2.01
LDB2O43679 SCARNA17.2-201ENST00000516334 143 ntBASIC2.51□□□□□ -2.01
LDB2O43679 SCARNA11.3-201ENST00000517276 130 ntBASIC2.51□□□□□ -2.01
LDB2O43679 AC022616.4-201ENST00000522985 181 ntBASIC2.51□□□□□ -2.01
LDB2O43679 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.51□□□□□ -2.01
LDB2O43679 AL078605.1-201ENST00000603529 500 ntBASIC2.51□□□□□ -2.01
LDB2O43679 AL034555.1-201ENST00000604816 211 ntBASIC2.51□□□□□ -2.01
LDB2O43679 SCARNA17.4-201ENST00000614296 143 ntBASIC2.51□□□□□ -2.01
LDB2O43679 MIR6817-201ENST00000615588 66 ntBASIC2.51□□□□□ -2.01
LDB2O43679 AL132822.1-201ENST00000617063 513 ntBASIC2.51□□□□□ -2.01
LDB2O43679 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.51□□□□□ -2.01
LDB2O43679 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
LDB2O43679 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
LDB2O43679 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.51□□□□□ -2.01
LDB2O43679 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
LDB2O43679 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.5□□□□□ -2.01
LDB2O43679 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.5□□□□□ -2.01
LDB2O43679 RNU6-655P-201ENST00000362858 107 ntBASIC2.5□□□□□ -2.01
LDB2O43679 RNU6-1159P-201ENST00000362933 107 ntBASIC2.5□□□□□ -2.01
LDB2O43679 Y_RNA.106-201ENST00000363189 100 ntBASIC2.5□□□□□ -2.01
LDB2O43679 Y_RNA.358-201ENST00000365491 99 ntBASIC2.5□□□□□ -2.01
LDB2O43679 SNORD14.1-201ENST00000365609 90 ntBASIC2.5□□□□□ -2.01
LDB2O43679 U8.10-201ENST00000384260 133 ntBASIC2.5□□□□□ -2.01
LDB2O43679 RNU6-823P-201ENST00000391042 103 ntBASIC2.5□□□□□ -2.01
LDB2O43679 MTCO3P19-201ENST00000415864 321 ntBASIC2.5□□□□□ -2.01
LDB2O43679 AC114482.1-201ENST00000418010 247 ntBASIC2.5□□□□□ -2.01
LDB2O43679 AC097463.2-201ENST00000421074 142 ntBASIC2.5□□□□□ -2.01
LDB2O43679 Z98742.2-201ENST00000431564 187 ntBASIC2.5□□□□□ -2.01
LDB2O43679 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.5□□□□□ -2.01
LDB2O43679 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.5□□□□□ -2.01
LDB2O43679 RPS3P1-201ENST00000456781 192 ntBASIC2.5□□□□□ -2.01
LDB2O43679 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.5□□□□□ -2.01
LDB2O43679 RNU7-87P-201ENST00000459343 62 ntBASIC2.5□□□□□ -2.01
LDB2O43679 AL121594.1-201ENST00000475906 575 ntBASIC2.5□□□□□ -2.01
LDB2O43679 RN7SL429P-201ENST00000479090 223 ntBASIC2.5□□□□□ -2.01
LDB2O43679 RN7SL489P-201ENST00000486185 223 ntBASIC2.5□□□□□ -2.01
LDB2O43679 RN7SL327P-201ENST00000488659 223 ntBASIC2.5□□□□□ -2.01
LDB2O43679 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.5□□□□□ -2.01
LDB2O43679 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.5□□□□□ -2.01
LDB2O43679 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.5□□□□□ -2.01
LDB2O43679 RNA5SP112-201ENST00000515937 99 ntBASIC2.5□□□□□ -2.01
LDB2O43679 MIR2355-201ENST00000517199 87 ntBASIC2.5□□□□□ -2.01
LDB2O43679 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.5□□□□□ -2.01
LDB2O43679 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.5□□□□□ -2.01
LDB2O43679 CYP4A27P-201ENST00000567218 190 ntBASIC2.5□□□□□ -2.01
LDB2O43679 AC090617.3-201ENST00000573670 475 ntBASIC2.5□□□□□ -2.01
LDB2O43679 MIR4765-201ENST00000585007 77 ntBASIC2.5□□□□□ -2.01
LDB2O43679 RN7SL853P-201ENST00000617250 223 ntBASIC2.5□□□□□ -2.01
LDB2O43679 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
LDB2O43679 Z75746.1-201ENST00000440243 2080 ntBASIC2.49□□□□□ -2.01
LDB2O43679 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.49□□□□□ -2.01
LDB2O43679 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.49□□□□□ -2.01
LDB2O43679 MTND5P16-201ENST00000460269 1703 ntBASIC2.49□□□□□ -2.01
LDB2O43679 ZNF72P-201ENST00000425869 1908 ntBASIC2.49□□□□□ -2.01
LDB2O43679 OR56A5-201ENST00000340110 738 ntBASIC2.49□□□□□ -2.01
LDB2O43679 RNU6-137P-201ENST00000363680 108 ntBASIC2.49□□□□□ -2.01
LDB2O43679 RNU6-1210P-201ENST00000363775 107 ntBASIC2.49□□□□□ -2.01
LDB2O43679 RNU1-109P-201ENST00000383960 147 ntBASIC2.49□□□□□ -2.01
LDB2O43679 MIR518C-201ENST00000384822 101 ntBASIC2.49□□□□□ -2.01
LDB2O43679 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC2.49□□□□□ -2.01
LDB2O43679 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.49□□□□□ -2.01
LDB2O43679 USP9YP16-201ENST00000430287 407 ntBASIC2.49□□□□□ -2.01
LDB2O43679 RPS12P2-201ENST00000439728 269 ntBASIC2.49□□□□□ -2.01
LDB2O43679 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.49□□□□□ -2.01
LDB2O43679 USP9YP23-201ENST00000455085 407 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms