Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 PCGEM1.1-201ENST00000613431 131 ntBASIC1.24□□□□□ -2.21
CHMP2AO43633 AL133216.2-202ENST00000634512 349 ntBASIC1.24□□□□□ -2.21
CHMP2AO43633 RNA5SP219-201ENST00000390940 113 ntBASIC1.23□□□□□ -2.21
CHMP2AO43633 MTCO3P41-201ENST00000414801 328 ntBASIC1.23□□□□□ -2.21
CHMP2AO43633 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.23□□□□□ -2.21
CHMP2AO43633 AC092447.3-201ENST00000426027 686 ntBASIC1.23□□□□□ -2.21
CHMP2AO43633 RPL23AP95-201ENST00000426806 265 ntBASIC1.23□□□□□ -2.21
CHMP2AO43633 AC099677.2-201ENST00000436385 175 ntBASIC1.23□□□□□ -2.21
CHMP2AO43633 TPT1P7-201ENST00000458300 517 ntBASIC1.23□□□□□ -2.21
CHMP2AO43633 RNU7-167P-201ENST00000459160 62 ntBASIC1.23□□□□□ -2.21
CHMP2AO43633 AC087343.1-201ENST00000477341 475 ntBASIC1.23□□□□□ -2.21
CHMP2AO43633 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC1.23□□□□□ -2.21
CHMP2AO43633 AC079140.2-201ENST00000506193 142 ntBASIC1.23□□□□□ -2.21
CHMP2AO43633 ARL2BPP4-201ENST00000506854 471 ntBASIC1.23□□□□□ -2.21
CHMP2AO43633 AC108078.1-201ENST00000508073 725 ntBASIC1.23□□□□□ -2.21
CHMP2AO43633 LRRC34P2-201ENST00000514850 553 ntBASIC1.23□□□□□ -2.21
CHMP2AO43633 MTCO2P4-201ENST00000517968 247 ntBASIC1.23□□□□□ -2.21
CHMP2AO43633 AC115990.1-201ENST00000526957 301 ntBASIC1.23□□□□□ -2.21
CHMP2AO43633 AL137161.1-201ENST00000532231 390 ntBASIC1.23□□□□□ -2.21
CHMP2AO43633 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.23□□□□□ -2.21
CHMP2AO43633 AP001836.1-201ENST00000604675 523 ntBASIC1.23□□□□□ -2.21
CHMP2AO43633 AC121247.2-201ENST00000604776 136 ntBASIC1.23□□□□□ -2.21
CHMP2AO43633 AL050343.2-201ENST00000607338 280 ntBASIC1.23□□□□□ -2.21
CHMP2AO43633 AL158063.1-201ENST00000615349 536 ntBASIC1.23□□□□□ -2.21
CHMP2AO43633 AL354950.2-201ENST00000617939 290 ntBASIC1.23□□□□□ -2.21
CHMP2AO43633 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.22□□□□□ -2.21
CHMP2AO43633 AP000568.1-201ENST00000282964 442 ntBASIC1.22□□□□□ -2.21
CHMP2AO43633 Y_RNA.409-201ENST00000383990 98 ntBASIC1.22□□□□□ -2.21
CHMP2AO43633 MIR1285-1-201ENST00000408593 84 ntBASIC1.22□□□□□ -2.21
CHMP2AO43633 RNU2-29P-201ENST00000410423 189 ntBASIC1.22□□□□□ -2.21
CHMP2AO43633 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.22□□□□□ -2.21
CHMP2AO43633 SNRPEP10-201ENST00000420249 274 ntBASIC1.22□□□□□ -2.21
CHMP2AO43633 AL606489.2-201ENST00000433886 234 ntBASIC1.22□□□□□ -2.21
CHMP2AO43633 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.22□□□□□ -2.21
CHMP2AO43633 AC027119.1-201ENST00000440877 241 ntBASIC1.22□□□□□ -2.21
CHMP2AO43633 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.22□□□□□ -2.21
CHMP2AO43633 snoU13.30-201ENST00000458951 104 ntBASIC1.22□□□□□ -2.21
CHMP2AO43633 RNU7-14P-201ENST00000459331 62 ntBASIC1.22□□□□□ -2.21
CHMP2AO43633 RPL31P58-201ENST00000469001 379 ntBASIC1.22□□□□□ -2.21
CHMP2AO43633 RN7SKP179-201ENST00000516126 217 ntBASIC1.22□□□□□ -2.21
CHMP2AO43633 RNA5SP102-201ENST00000516865 106 ntBASIC1.22□□□□□ -2.21
CHMP2AO43633 RNA5SP437-201ENST00000517249 129 ntBASIC1.22□□□□□ -2.21
CHMP2AO43633 AC109479.2-201ENST00000517842 174 ntBASIC1.22□□□□□ -2.21
CHMP2AO43633 AC104576.1-201ENST00000524225 88 ntBASIC1.22□□□□□ -2.21
CHMP2AO43633 AC007834.2-201ENST00000536310 343 ntBASIC1.22□□□□□ -2.21
CHMP2AO43633 AC090115.3-201ENST00000553218 849 ntBASIC1.22□□□□□ -2.21
CHMP2AO43633 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.22□□□□□ -2.21
CHMP2AO43633 AL158211.1-201ENST00000566763 763 ntBASIC1.22□□□□□ -2.21
CHMP2AO43633 MIR3937-201ENST00000580135 106 ntBASIC1.22□□□□□ -2.21
CHMP2AO43633 AP001596.2-201ENST00000608410 312 ntBASIC1.22□□□□□ -2.21
CHMP2AO43633 AC064836.2-201ENST00000609491 462 ntBASIC1.22□□□□□ -2.21
CHMP2AO43633 AP000770.2-201ENST00000623694 100 ntBASIC1.22□□□□□ -2.21
CHMP2AO43633 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC1.22□□□□□ -2.21
CHMP2AO43633 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
CHMP2AO43633 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
CHMP2AO43633 AC091812.1-201ENST00000432235 1948 ntBASIC1.21□□□□□ -2.22
CHMP2AO43633 RNU6-1120P-201ENST00000362988 108 ntBASIC1.21□□□□□ -2.22
CHMP2AO43633 RNU6-996P-201ENST00000365438 107 ntBASIC1.21□□□□□ -2.22
CHMP2AO43633 Y_RNA.399-201ENST00000383955 105 ntBASIC1.21□□□□□ -2.22
CHMP2AO43633 Y_RNA.480-201ENST00000384364 102 ntBASIC1.21□□□□□ -2.22
CHMP2AO43633 MIR487A-201ENST00000385009 80 ntBASIC1.21□□□□□ -2.22
CHMP2AO43633 RN7SKP61-201ENST00000410642 295 ntBASIC1.21□□□□□ -2.22
CHMP2AO43633 RNU2-7P-201ENST00000410794 178 ntBASIC1.21□□□□□ -2.22
CHMP2AO43633 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC1.21□□□□□ -2.22
CHMP2AO43633 AL133396.1-201ENST00000432048 687 ntBASIC1.21□□□□□ -2.22
CHMP2AO43633 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC1.21□□□□□ -2.22
CHMP2AO43633 RNU7-63P-201ENST00000459054 62 ntBASIC1.21□□□□□ -2.22
CHMP2AO43633 RPL9P9-202ENST00000466501 579 ntBASIC1.21□□□□□ -2.22
CHMP2AO43633 GMFBP1-201ENST00000467831 427 ntBASIC1.21□□□□□ -2.22
CHMP2AO43633 AL133373.1-201ENST00000497098 94 ntBASIC1.21□□□□□ -2.22
CHMP2AO43633 AC022447.4-201ENST00000504053 364 ntBASIC1.21□□□□□ -2.22
CHMP2AO43633 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.21□□□□□ -2.22
CHMP2AO43633 SUMO2P18-201ENST00000518873 252 ntBASIC1.21□□□□□ -2.22
CHMP2AO43633 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC1.21□□□□□ -2.22
CHMP2AO43633 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.21□□□□□ -2.22
CHMP2AO43633 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.21□□□□□ -2.22
CHMP2AO43633 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.21□□□□□ -2.22
CHMP2AO43633 OSBPL9P5-201ENST00000542581 171 ntBASIC1.21□□□□□ -2.22
CHMP2AO43633 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.21□□□□□ -2.22
CHMP2AO43633 NIFKP6-201ENST00000598115 845 ntBASIC1.21□□□□□ -2.22
CHMP2AO43633 uc_338.34-201ENST00000617467 174 ntBASIC1.21□□□□□ -2.22
CHMP2AO43633 AC072046.2-201ENST00000618366 268 ntBASIC1.21□□□□□ -2.22
CHMP2AO43633 RNA5SP327-201ENST00000362494 101 ntBASIC1.2□□□□□ -2.22
CHMP2AO43633 RNU6-545P-201ENST00000362681 104 ntBASIC1.2□□□□□ -2.22
CHMP2AO43633 RNU4-20P-201ENST00000365601 151 ntBASIC1.2□□□□□ -2.22
CHMP2AO43633 SNORA18.2-201ENST00000383865 132 ntBASIC1.2□□□□□ -2.22
CHMP2AO43633 SNORA32.2-201ENST00000384049 122 ntBASIC1.2□□□□□ -2.22
CHMP2AO43633 SNORA26.3-201ENST00000391119 136 ntBASIC1.2□□□□□ -2.22
CHMP2AO43633 MIR208B-201ENST00000401172 77 ntBASIC1.2□□□□□ -2.22
CHMP2AO43633 MRPL35P1-201ENST00000404272 572 ntBASIC1.2□□□□□ -2.22
CHMP2AO43633 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC1.2□□□□□ -2.22
CHMP2AO43633 MTND3P9-201ENST00000429526 346 ntBASIC1.2□□□□□ -2.22
CHMP2AO43633 C8orf59P1-201ENST00000429930 303 ntBASIC1.2□□□□□ -2.22
CHMP2AO43633 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.2□□□□□ -2.22
CHMP2AO43633 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.2□□□□□ -2.22
CHMP2AO43633 AL356010.1-201ENST00000456364 102 ntBASIC1.2□□□□□ -2.22
CHMP2AO43633 AC022364.2-201ENST00000457963 554 ntBASIC1.2□□□□□ -2.22
CHMP2AO43633 RNU6-956P-201ENST00000458868 103 ntBASIC1.2□□□□□ -2.22
CHMP2AO43633 AC007547.1-201ENST00000462177 490 ntBASIC1.2□□□□□ -2.22
CHMP2AO43633 AC010531.2-201ENST00000465012 153 ntBASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms