Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.75□□□□□ -2.29
SGCEO43556 SNORD114-2-201ENST00000363953 78 ntBASIC0.74□□□□□ -2.29
SGCEO43556 SNORD114-24-201ENST00000365029 72 ntBASIC0.74□□□□□ -2.29
SGCEO43556 Y_RNA.367-201ENST00000365544 101 ntBASIC0.74□□□□□ -2.29
SGCEO43556 RNU6-827P-201ENST00000365553 106 ntBASIC0.74□□□□□ -2.29
SGCEO43556 MIR513B-201ENST00000385136 84 ntBASIC0.74□□□□□ -2.29
SGCEO43556 MIR100-201ENST00000385259 80 ntBASIC0.74□□□□□ -2.29
SGCEO43556 MIR454-201ENST00000390180 115 ntBASIC0.74□□□□□ -2.29
SGCEO43556 Y_RNA.598-201ENST00000410480 95 ntBASIC0.74□□□□□ -2.29
SGCEO43556 RNU2-64P-201ENST00000411315 191 ntBASIC0.74□□□□□ -2.29
SGCEO43556 AC104850.1-201ENST00000435940 476 ntBASIC0.74□□□□□ -2.29
SGCEO43556 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC0.74□□□□□ -2.29
SGCEO43556 AC010486.2-201ENST00000505572 483 ntBASIC0.74□□□□□ -2.29
SGCEO43556 RNU6-165P-201ENST00000517170 99 ntBASIC0.74□□□□□ -2.29
SGCEO43556 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC0.74□□□□□ -2.29
SGCEO43556 AC103996.1-201ENST00000555468 102 ntBASIC0.74□□□□□ -2.29
SGCEO43556 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC0.74□□□□□ -2.29
SGCEO43556 AC109446.2-201ENST00000567872 497 ntBASIC0.74□□□□□ -2.29
SGCEO43556 MIR4742-201ENST00000581069 85 ntBASIC0.74□□□□□ -2.29
SGCEO43556 MIR4775-201ENST00000581168 75 ntBASIC0.74□□□□□ -2.29
SGCEO43556 MIR3941-201ENST00000582572 103 ntBASIC0.74□□□□□ -2.29
SGCEO43556 FAM71BP1-201ENST00000604431 523 ntBASIC0.74□□□□□ -2.29
SGCEO43556 AP000240.1-201ENST00000609910 452 ntBASIC0.74□□□□□ -2.29
SGCEO43556 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC0.74□□□□□ -2.29
SGCEO43556 AP000720.1-201ENST00000625091 483 ntBASIC0.74□□□□□ -2.29
SGCEO43556 SEPT14P19-203ENST00000633205 211 ntBASIC0.74□□□□□ -2.29
SGCEO43556 AC007671.2-201ENST00000637344 619 ntBASIC0.74□□□□□ -2.29
SGCEO43556 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC0.74□□□□□ -2.29
SGCEO43556 HSBP1P2-201ENST00000299671 229 ntBASIC0.73□□□□□ -2.29
SGCEO43556 SNORA36A-201ENST00000384221 132 ntBASIC0.73□□□□□ -2.29
SGCEO43556 SNORD12-201ENST00000391002 90 ntBASIC0.73□□□□□ -2.29
SGCEO43556 AC006461.1-201ENST00000412637 326 ntBASIC0.73□□□□□ -2.29
SGCEO43556 AC106883.1-201ENST00000418805 562 ntBASIC0.73□□□□□ -2.29
SGCEO43556 PIGFP2-201ENST00000421400 651 ntBASIC0.73□□□□□ -2.29
SGCEO43556 RAB28P5-201ENST00000427490 651 ntBASIC0.73□□□□□ -2.29
SGCEO43556 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC0.73□□□□□ -2.29
SGCEO43556 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC0.73□□□□□ -2.29
SGCEO43556 AL133217.1-201ENST00000450980 425 ntBASIC0.73□□□□□ -2.29
SGCEO43556 Y_RNA.638-201ENST00000459374 113 ntBASIC0.73□□□□□ -2.29
SGCEO43556 TRBVA-201ENST00000498804 316 ntBASIC0.73□□□□□ -2.29
SGCEO43556 AC091874.1-201ENST00000511402 339 ntBASIC0.73□□□□□ -2.29
SGCEO43556 RN7SKP265-201ENST00000516448 223 ntBASIC0.73□□□□□ -2.29
SGCEO43556 RNU2-46P-201ENST00000517038 113 ntBASIC0.73□□□□□ -2.29
SGCEO43556 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.73□□□□□ -2.29
SGCEO43556 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.73□□□□□ -2.29
SGCEO43556 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC0.73□□□□□ -2.29
SGCEO43556 RSL24D1P11-201ENST00000591045 491 ntBASIC0.73□□□□□ -2.29
SGCEO43556 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0.73□□□□□ -2.29
SGCEO43556 RNU11-5P-201ENST00000391216 129 ntBASIC0.72□□□□□ -2.29
SGCEO43556 RPL21P1-201ENST00000399532 476 ntBASIC0.72□□□□□ -2.29
SGCEO43556 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC0.72□□□□□ -2.29
SGCEO43556 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.72□□□□□ -2.29
SGCEO43556 TAF9P1-201ENST00000445421 515 ntBASIC0.72□□□□□ -2.29
SGCEO43556 AC074290.1-201ENST00000448883 135 ntBASIC0.72□□□□□ -2.29
SGCEO43556 TAF9P2-201ENST00000454958 515 ntBASIC0.72□□□□□ -2.29
SGCEO43556 MTCO2P6-201ENST00000463134 685 ntBASIC0.72□□□□□ -2.29
SGCEO43556 RAP1BP2-201ENST00000478270 544 ntBASIC0.72□□□□□ -2.29
SGCEO43556 AC069113.1-201ENST00000517763 267 ntBASIC0.72□□□□□ -2.29
SGCEO43556 AP003072.2-201ENST00000527756 676 ntBASIC0.72□□□□□ -2.29
SGCEO43556 ELOCP32-201ENST00000548625 324 ntBASIC0.72□□□□□ -2.29
SGCEO43556 AC026470.2-201ENST00000561492 181 ntBASIC0.72□□□□□ -2.29
SGCEO43556 MIR4698-201ENST00000577795 80 ntBASIC0.72□□□□□ -2.29
SGCEO43556 MIR3682-201ENST00000581338 84 ntBASIC0.72□□□□□ -2.29
SGCEO43556 AC008751.2-201ENST00000597885 980 ntBASIC0.72□□□□□ -2.29
SGCEO43556 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
SGCEO43556 AC009509.4-201ENST00000619202 509 ntBASIC0.72□□□□□ -2.29
SGCEO43556 SNORA43.4-201ENST00000629559 138 ntBASIC0.72□□□□□ -2.29
SGCEO43556 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.71□□□□□ -2.3
SGCEO43556 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.71□□□□□ -2.3
SGCEO43556 RNU4-79P-201ENST00000362764 141 ntBASIC0.71□□□□□ -2.3
SGCEO43556 RNU6-975P-201ENST00000384296 105 ntBASIC0.71□□□□□ -2.3
SGCEO43556 RNU6-910P-201ENST00000390844 107 ntBASIC0.71□□□□□ -2.3
SGCEO43556 RNA5SP323-201ENST00000391094 133 ntBASIC0.71□□□□□ -2.3
SGCEO43556 MTCO2P8-201ENST00000412213 658 ntBASIC0.71□□□□□ -2.3
SGCEO43556 AC063976.4-201ENST00000421971 163 ntBASIC0.71□□□□□ -2.3
SGCEO43556 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC0.71□□□□□ -2.3
SGCEO43556 AC011233.1-201ENST00000422812 283 ntBASIC0.71□□□□□ -2.3
SGCEO43556 GPR143P-201ENST00000434155 205 ntBASIC0.71□□□□□ -2.3
SGCEO43556 HMGN2P34-201ENST00000437647 269 ntBASIC0.71□□□□□ -2.3
SGCEO43556 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.71□□□□□ -2.3
SGCEO43556 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC0.71□□□□□ -2.3
SGCEO43556 PSMC1P5-201ENST00000512850 177 ntBASIC0.71□□□□□ -2.3
SGCEO43556 RNU6-351P-201ENST00000516097 100 ntBASIC0.71□□□□□ -2.3
SGCEO43556 RNU6-311P-201ENST00000516224 102 ntBASIC0.71□□□□□ -2.3
SGCEO43556 RNA5SP102-201ENST00000516865 106 ntBASIC0.71□□□□□ -2.3
SGCEO43556 SNORA25.17-201ENST00000517184 124 ntBASIC0.71□□□□□ -2.3
SGCEO43556 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC0.71□□□□□ -2.3
SGCEO43556 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.71□□□□□ -2.3
SGCEO43556 AP003461.1-201ENST00000528866 78 ntBASIC0.71□□□□□ -2.3
SGCEO43556 AC016256.1-201ENST00000547971 354 ntBASIC0.71□□□□□ -2.3
SGCEO43556 MIR3973-201ENST00000579824 107 ntBASIC0.71□□□□□ -2.3
SGCEO43556 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC0.71□□□□□ -2.3
SGCEO43556 AL929325.1-201ENST00000603096 117 ntBASIC0.71□□□□□ -2.3
SGCEO43556 AL513534.2-201ENST00000603836 250 ntBASIC0.71□□□□□ -2.3
SGCEO43556 AC021506.2-201ENST00000612354 169 ntBASIC0.71□□□□□ -2.3
SGCEO43556 AC106800.4-201ENST00000614905 153 ntBASIC0.71□□□□□ -2.3
SGCEO43556 AC005562.2-201ENST00000618264 111 ntBASIC0.71□□□□□ -2.3
SGCEO43556 AC010608.3-201ENST00000625048 527 ntBASIC0.71□□□□□ -2.3
SGCEO43556 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.71□□□□□ -2.3
SGCEO43556 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms