Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 AC009310.1-201ENST00000414414 451 ntBASIC1.58□□□□□ -2.16
MSH4O15457 AC123900.1-201ENST00000420390 96 ntBASIC1.58□□□□□ -2.16
MSH4O15457 AC012306.1-201ENST00000423267 114 ntBASIC1.58□□□□□ -2.16
MSH4O15457 HSPE1P21-201ENST00000438283 308 ntBASIC1.58□□□□□ -2.16
MSH4O15457 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC1.58□□□□□ -2.16
MSH4O15457 SNRPGP13-201ENST00000442212 177 ntBASIC1.58□□□□□ -2.16
MSH4O15457 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.58□□□□□ -2.16
MSH4O15457 AC021146.2-201ENST00000504736 556 ntBASIC1.58□□□□□ -2.16
MSH4O15457 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.58□□□□□ -2.16
MSH4O15457 RNVU1-2-201ENST00000516326 135 ntBASIC1.58□□□□□ -2.16
MSH4O15457 AC104576.1-201ENST00000524225 88 ntBASIC1.58□□□□□ -2.16
MSH4O15457 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.58□□□□□ -2.16
MSH4O15457 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.58□□□□□ -2.16
MSH4O15457 AC064836.2-201ENST00000609491 462 ntBASIC1.58□□□□□ -2.16
MSH4O15457 AC073534.2-201ENST00000620377 381 ntBASIC1.58□□□□□ -2.16
MSH4O15457 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC1.58□□□□□ -2.16
MSH4O15457 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.58□□□□□ -2.16
MSH4O15457 OR5AK4P-201ENST00000635912 903 ntBASIC1.58□□□□□ -2.16
MSH4O15457 RNU6-227P-201ENST00000362865 103 ntBASIC1.57□□□□□ -2.16
MSH4O15457 SNORA32.2-201ENST00000384049 122 ntBASIC1.57□□□□□ -2.16
MSH4O15457 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.57□□□□□ -2.16
MSH4O15457 TIMM9P3-201ENST00000428659 274 ntBASIC1.57□□□□□ -2.16
MSH4O15457 RNU7-14P-201ENST00000459331 62 ntBASIC1.57□□□□□ -2.16
MSH4O15457 AC007547.1-201ENST00000462177 490 ntBASIC1.57□□□□□ -2.16
MSH4O15457 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.57□□□□□ -2.16
MSH4O15457 Y_RNA.654-201ENST00000497848 106 ntBASIC1.57□□□□□ -2.16
MSH4O15457 SNORA19.2-201ENST00000516013 114 ntBASIC1.57□□□□□ -2.16
MSH4O15457 RNU5F-4P-201ENST00000516581 114 ntBASIC1.57□□□□□ -2.16
MSH4O15457 RNU6-1098P-201ENST00000516772 96 ntBASIC1.57□□□□□ -2.16
MSH4O15457 AC024909.2-201ENST00000553035 286 ntBASIC1.57□□□□□ -2.16
MSH4O15457 SUB1P3-201ENST00000564581 315 ntBASIC1.57□□□□□ -2.16
MSH4O15457 MIR5692C1-201ENST00000585309 91 ntBASIC1.57□□□□□ -2.16
MSH4O15457 AC092807.2-201ENST00000609367 243 ntBASIC1.57□□□□□ -2.16
MSH4O15457 AL136221.1-201ENST00000621449 509 ntBASIC1.57□□□□□ -2.16
MSH4O15457 WWP1P1-201ENST00000466609 2769 ntBASIC1.56□□□□□ -2.16
MSH4O15457 Y_RNA.41-201ENST00000362646 102 ntBASIC1.56□□□□□ -2.16
MSH4O15457 Y_RNA.517-201ENST00000384551 106 ntBASIC1.56□□□□□ -2.16
MSH4O15457 MTCO3P40-201ENST00000392516 676 ntBASIC1.56□□□□□ -2.16
MSH4O15457 AC139712.2-201ENST00000424302 339 ntBASIC1.56□□□□□ -2.16
MSH4O15457 MTND3P9-201ENST00000429526 346 ntBASIC1.56□□□□□ -2.16
MSH4O15457 RNU1-131P-201ENST00000458943 161 ntBASIC1.56□□□□□ -2.16
MSH4O15457 AC130509.1-201ENST00000464158 433 ntBASIC1.56□□□□□ -2.16
MSH4O15457 TOMM22P6-201ENST00000465035 409 ntBASIC1.56□□□□□ -2.16
MSH4O15457 AC091885.1-201ENST00000506658 268 ntBASIC1.56□□□□□ -2.16
MSH4O15457 AC025465.4-201ENST00000513422 638 ntBASIC1.56□□□□□ -2.16
MSH4O15457 RNA5SP61-201ENST00000516453 100 ntBASIC1.56□□□□□ -2.16
MSH4O15457 RNU6-835P-201ENST00000516974 104 ntBASIC1.56□□□□□ -2.16
MSH4O15457 NDUFAF4P1-201ENST00000559425 519 ntBASIC1.56□□□□□ -2.16
MSH4O15457 AC090517.1-201ENST00000569307 266 ntBASIC1.56□□□□□ -2.16
MSH4O15457 MIR4421-201ENST00000578133 69 ntBASIC1.56□□□□□ -2.16
MSH4O15457 AC010928.2-201ENST00000588017 287 ntBASIC1.56□□□□□ -2.16
MSH4O15457 AC009994.1-201ENST00000606889 253 ntBASIC1.56□□□□□ -2.16
MSH4O15457 AC064807.4-201ENST00000607201 407 ntBASIC1.56□□□□□ -2.16
MSH4O15457 AC005520.5-201ENST00000613926 164 ntBASIC1.56□□□□□ -2.16
MSH4O15457 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.56□□□□□ -2.16
MSH4O15457 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.56□□□□□ -2.16
MSH4O15457 AC124864.2-201ENST00000624736 186 ntBASIC1.56□□□□□ -2.16
MSH4O15457 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.55□□□□□ -2.16
MSH4O15457 MTND5P10-201ENST00000603719 1809 ntBASIC1.55□□□□□ -2.16
MSH4O15457 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
MSH4O15457 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
MSH4O15457 RNU4-24P-201ENST00000364565 139 ntBASIC1.55□□□□□ -2.16
MSH4O15457 RNU6-1329P-201ENST00000365664 107 ntBASIC1.55□□□□□ -2.16
MSH4O15457 RNU6-780P-201ENST00000391030 104 ntBASIC1.55□□□□□ -2.16
MSH4O15457 RNU6-1093P-201ENST00000391194 107 ntBASIC1.55□□□□□ -2.16
MSH4O15457 CALM2P3-201ENST00000400429 449 ntBASIC1.55□□□□□ -2.16
MSH4O15457 RNU6-321P-201ENST00000410912 106 ntBASIC1.55□□□□□ -2.16
MSH4O15457 AC007098.1-201ENST00000420122 367 ntBASIC1.55□□□□□ -2.16
MSH4O15457 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.55□□□□□ -2.16
MSH4O15457 MTND3P16-201ENST00000452205 344 ntBASIC1.55□□□□□ -2.16
MSH4O15457 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.55□□□□□ -2.16
MSH4O15457 snoU13.6-201ENST00000458785 104 ntBASIC1.55□□□□□ -2.16
MSH4O15457 U8.21-201ENST00000459536 136 ntBASIC1.55□□□□□ -2.16
MSH4O15457 RNU6-1208P-201ENST00000459588 107 ntBASIC1.55□□□□□ -2.16
MSH4O15457 RPS29P27-201ENST00000463711 170 ntBASIC1.55□□□□□ -2.16
MSH4O15457 RPL9P9-202ENST00000466501 579 ntBASIC1.55□□□□□ -2.16
MSH4O15457 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.55□□□□□ -2.16
MSH4O15457 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC1.55□□□□□ -2.16
MSH4O15457 AL163540.1-201ENST00000485382 386 ntBASIC1.55□□□□□ -2.16
MSH4O15457 AC107401.1-201ENST00000503426 685 ntBASIC1.55□□□□□ -2.16
MSH4O15457 AC105313.1-201ENST00000509121 353 ntBASIC1.55□□□□□ -2.16
MSH4O15457 RNU1-92P-201ENST00000517017 135 ntBASIC1.55□□□□□ -2.16
MSH4O15457 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.55□□□□□ -2.16
MSH4O15457 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.55□□□□□ -2.16
MSH4O15457 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.55□□□□□ -2.16
MSH4O15457 MIR4781-201ENST00000585250 76 ntBASIC1.55□□□□□ -2.16
MSH4O15457 AC005786.1-201ENST00000588553 154 ntBASIC1.55□□□□□ -2.16
MSH4O15457 AC103810.8-201ENST00000607347 118 ntBASIC1.55□□□□□ -2.16
MSH4O15457 AL359880.1-201ENST00000621879 266 ntBASIC1.55□□□□□ -2.16
MSH4O15457 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.55□□□□□ -2.16
MSH4O15457 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.55□□□□□ -2.16
MSH4O15457 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.55□□□□□ -2.16
MSH4O15457 MIR340-201ENST00000362125 95 ntBASIC1.54□□□□□ -2.16
MSH4O15457 RNU6-1317P-201ENST00000364582 104 ntBASIC1.54□□□□□ -2.16
MSH4O15457 SNORD31B-201ENST00000364977 69 ntBASIC1.54□□□□□ -2.16
MSH4O15457 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.54□□□□□ -2.16
MSH4O15457 RNU6-1026P-201ENST00000384465 108 ntBASIC1.54□□□□□ -2.16
MSH4O15457 SNORA12.2-201ENST00000391040 156 ntBASIC1.54□□□□□ -2.16
MSH4O15457 RNU6-648P-201ENST00000410190 107 ntBASIC1.54□□□□□ -2.16
MSH4O15457 RNU2-16P-201ENST00000410712 136 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 161.8 ms