Protein–RNA interactions for Protein: O15259

NPHP1, Nephrocystin-1, humanhuman

Predictions only

Length 732 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1O15259 RNU6-95P-201ENST00000384697 107 ntBASIC2.51□□□□□ -2.01
NPHP1O15259 MIR597-201ENST00000384968 97 ntBASIC2.51□□□□□ -2.01
NPHP1O15259 RNU11-3P-201ENST00000391111 133 ntBASIC2.51□□□□□ -2.01
NPHP1O15259 UBE2V1P8-201ENST00000437166 265 ntBASIC2.51□□□□□ -2.01
NPHP1O15259 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.51□□□□□ -2.01
NPHP1O15259 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.51□□□□□ -2.01
NPHP1O15259 RNA5SP182-201ENST00000516064 82 ntBASIC2.51□□□□□ -2.01
NPHP1O15259 RNU6-1098P-201ENST00000516772 96 ntBASIC2.51□□□□□ -2.01
NPHP1O15259 AC090517.1-201ENST00000569307 266 ntBASIC2.51□□□□□ -2.01
NPHP1O15259 MIR3976-201ENST00000606807 139 ntBASIC2.51□□□□□ -2.01
NPHP1O15259 MIR3662-201ENST00000637030 95 ntBASIC2.51□□□□□ -2.01
NPHP1O15259 AC073869.6-201ENST00000640656 341 ntBASIC2.51□□□□□ -2.01
NPHP1O15259 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.5□□□□□ -2.01
NPHP1O15259 AL353689.1-201ENST00000438895 199 ntBASIC2.5□□□□□ -2.01
NPHP1O15259 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC2.5□□□□□ -2.01
NPHP1O15259 RNU6-1053P-201ENST00000515930 101 ntBASIC2.5□□□□□ -2.01
NPHP1O15259 RNU6-1314P-201ENST00000517139 104 ntBASIC2.5□□□□□ -2.01
NPHP1O15259 AC087441.2-201ENST00000529141 262 ntBASIC2.5□□□□□ -2.01
NPHP1O15259 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.5□□□□□ -2.01
NPHP1O15259 RPL17P51-201ENST00000605218 238 ntBASIC2.5□□□□□ -2.01
NPHP1O15259 SDR42E1P4-201ENST00000620894 481 ntBASIC2.5□□□□□ -2.01
NPHP1O15259 AP000553.5-201ENST00000641933 54 ntBASIC2.5□□□□□ -2.01
NPHP1O15259 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
NPHP1O15259 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.5□□□□□ -2.01
NPHP1O15259 AL359851.1-201ENST00000569460 4997 ntBASIC2.5□□□□□ -2.01
NPHP1O15259 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.49□□□□□ -2.01
NPHP1O15259 RNU1-76P-201ENST00000362903 159 ntBASIC2.49□□□□□ -2.01
NPHP1O15259 Y_RNA.151-201ENST00000363566 112 ntBASIC2.49□□□□□ -2.01
NPHP1O15259 Y_RNA.157-201ENST00000363638 102 ntBASIC2.49□□□□□ -2.01
NPHP1O15259 Y_RNA.212-201ENST00000364177 102 ntBASIC2.49□□□□□ -2.01
NPHP1O15259 RNU6-160P-201ENST00000384591 107 ntBASIC2.49□□□□□ -2.01
NPHP1O15259 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
NPHP1O15259 RNU6-1093P-201ENST00000391194 107 ntBASIC2.49□□□□□ -2.01
NPHP1O15259 RNA5SP494-201ENST00000410653 129 ntBASIC2.49□□□□□ -2.01
NPHP1O15259 RPS26P42-201ENST00000413485 326 ntBASIC2.49□□□□□ -2.01
NPHP1O15259 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC2.49□□□□□ -2.01
NPHP1O15259 AC011352.1-201ENST00000512300 793 ntBASIC2.49□□□□□ -2.01
NPHP1O15259 RNU5F-4P-201ENST00000516581 114 ntBASIC2.49□□□□□ -2.01
NPHP1O15259 AP005660.1-201ENST00000522972 293 ntBASIC2.49□□□□□ -2.01
NPHP1O15259 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.49□□□□□ -2.01
NPHP1O15259 AL109918.3-201ENST00000603072 338 ntBASIC2.49□□□□□ -2.01
NPHP1O15259 AL022345.1-201ENST00000607292 135 ntBASIC2.49□□□□□ -2.01
NPHP1O15259 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
NPHP1O15259 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
NPHP1O15259 RNU6-562P-201ENST00000362731 107 ntBASIC2.48□□□□□ -2.01
NPHP1O15259 FGF7P8-201ENST00000402994 292 ntBASIC2.48□□□□□ -2.01
NPHP1O15259 RNU6-1148P-201ENST00000410992 104 ntBASIC2.48□□□□□ -2.01
NPHP1O15259 MTND1P23-201ENST00000416931 372 ntBASIC2.48□□□□□ -2.01
NPHP1O15259 AL158823.1-201ENST00000418441 478 ntBASIC2.48□□□□□ -2.01
NPHP1O15259 AC123900.1-201ENST00000420390 96 ntBASIC2.48□□□□□ -2.01
NPHP1O15259 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC2.48□□□□□ -2.01
NPHP1O15259 TOMM22P6-201ENST00000465035 409 ntBASIC2.48□□□□□ -2.01
NPHP1O15259 AC092989.1-201ENST00000481235 277 ntBASIC2.48□□□□□ -2.01
NPHP1O15259 AF186996.7-201ENST00000492781 209 ntBASIC2.48□□□□□ -2.01
NPHP1O15259 RNU6-718P-201ENST00000516166 105 ntBASIC2.48□□□□□ -2.01
NPHP1O15259 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.48□□□□□ -2.01
NPHP1O15259 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.48□□□□□ -2.01
NPHP1O15259 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.48□□□□□ -2.01
NPHP1O15259 MIR3942-201ENST00000585264 109 ntBASIC2.48□□□□□ -2.01
NPHP1O15259 LINC02555-201ENST00000563933 1951 ntBASIC2.48□□□□□ -2.01
NPHP1O15259 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.48□□□□□ -2.01
NPHP1O15259 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
NPHP1O15259 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
NPHP1O15259 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
NPHP1O15259 RNA5SP493-201ENST00000364115 91 ntBASIC2.47□□□□□ -2.01
NPHP1O15259 SNORD114-6-201ENST00000364393 72 ntBASIC2.47□□□□□ -2.01
NPHP1O15259 SNORA32.2-201ENST00000384049 122 ntBASIC2.47□□□□□ -2.01
NPHP1O15259 RNU6-790P-201ENST00000384479 105 ntBASIC2.47□□□□□ -2.01
NPHP1O15259 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
NPHP1O15259 AC108667.1-201ENST00000428618 249 ntBASIC2.47□□□□□ -2.01
NPHP1O15259 PCMTD1P1-201ENST00000455560 355 ntBASIC2.47□□□□□ -2.01
NPHP1O15259 RNA5SP233-201ENST00000459153 113 ntBASIC2.47□□□□□ -2.01
NPHP1O15259 RNU7-14P-201ENST00000459331 62 ntBASIC2.47□□□□□ -2.01
NPHP1O15259 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC2.47□□□□□ -2.01
NPHP1O15259 DEFB131C-201ENST00000528817 165 ntBASIC2.47□□□□□ -2.01
NPHP1O15259 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC2.47□□□□□ -2.01
NPHP1O15259 AC068790.6-201ENST00000602558 258 ntBASIC2.47□□□□□ -2.01
NPHP1O15259 AL590240.4-201ENST00000616908 390 ntBASIC2.47□□□□□ -2.01
NPHP1O15259 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.47□□□□□ -2.01
NPHP1O15259 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.47□□□□□ -2.01
NPHP1O15259 AC009033.1-201ENST00000624279 431 ntBASIC2.47□□□□□ -2.01
NPHP1O15259 AC100810.6-201ENST00000638068 285 ntBASIC2.47□□□□□ -2.01
NPHP1O15259 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
NPHP1O15259 MIR340-201ENST00000362125 95 ntBASIC2.46□□□□□ -2.02
NPHP1O15259 SNORD116-11-201ENST00000383882 92 ntBASIC2.46□□□□□ -2.02
NPHP1O15259 SNORA12.2-201ENST00000391040 156 ntBASIC2.46□□□□□ -2.02
NPHP1O15259 AC009161.1-201ENST00000417306 376 ntBASIC2.46□□□□□ -2.02
NPHP1O15259 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.46□□□□□ -2.02
NPHP1O15259 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.46□□□□□ -2.02
NPHP1O15259 AC130509.1-201ENST00000464158 433 ntBASIC2.46□□□□□ -2.02
NPHP1O15259 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.46□□□□□ -2.02
NPHP1O15259 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC2.46□□□□□ -2.02
NPHP1O15259 RNU6-864P-201ENST00000516256 108 ntBASIC2.46□□□□□ -2.02
NPHP1O15259 Y_RNA.673-201ENST00000516306 88 ntBASIC2.46□□□□□ -2.02
NPHP1O15259 SNORA25.15-201ENST00000516487 89 ntBASIC2.46□□□□□ -2.02
NPHP1O15259 AP005639.2-201ENST00000527592 928 ntBASIC2.46□□□□□ -2.02
NPHP1O15259 GNAI2P1-201ENST00000541815 315 ntBASIC2.46□□□□□ -2.02
NPHP1O15259 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC2.46□□□□□ -2.02
NPHP1O15259 MIR4299-201ENST00000577899 72 ntBASIC2.46□□□□□ -2.02
NPHP1O15259 MIR3169-201ENST00000578032 83 ntBASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms