Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 HMGN1P13-201ENST00000505795 138 ntBASIC1.9□□□□□ -2.11
CDX4O14627 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.9□□□□□ -2.11
CDX4O14627 SNORA25.15-201ENST00000516487 89 ntBASIC1.9□□□□□ -2.11
CDX4O14627 Y_RNA.718-201ENST00000517110 102 ntBASIC1.9□□□□□ -2.11
CDX4O14627 AP005902.1-201ENST00000521358 186 ntBASIC1.9□□□□□ -2.11
CDX4O14627 AC115990.1-201ENST00000526957 301 ntBASIC1.9□□□□□ -2.11
CDX4O14627 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.9□□□□□ -2.11
CDX4O14627 IMMP1LP2-201ENST00000552954 492 ntBASIC1.9□□□□□ -2.11
CDX4O14627 AC103996.1-201ENST00000555468 102 ntBASIC1.9□□□□□ -2.11
CDX4O14627 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.9□□□□□ -2.11
CDX4O14627 MYL12BP1-201ENST00000569826 507 ntBASIC1.9□□□□□ -2.11
CDX4O14627 MIR5002-201ENST00000584713 97 ntBASIC1.9□□□□□ -2.11
CDX4O14627 BNIP3P16-201ENST00000589779 534 ntBASIC1.9□□□□□ -2.11
CDX4O14627 SNRPGP19-201ENST00000603826 189 ntBASIC1.9□□□□□ -2.11
CDX4O14627 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.9□□□□□ -2.11
CDX4O14627 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
CDX4O14627 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
CDX4O14627 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
CDX4O14627 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
CDX4O14627 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
CDX4O14627 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.89□□□□□ -2.11
CDX4O14627 RNU6-212P-201ENST00000362642 104 ntBASIC1.89□□□□□ -2.11
CDX4O14627 RNU6-655P-201ENST00000362858 107 ntBASIC1.89□□□□□ -2.11
CDX4O14627 Y_RNA.460-201ENST00000384255 102 ntBASIC1.89□□□□□ -2.11
CDX4O14627 Y_RNA.482-201ENST00000384377 111 ntBASIC1.89□□□□□ -2.11
CDX4O14627 RNU6-1297P-201ENST00000384415 104 ntBASIC1.89□□□□□ -2.11
CDX4O14627 RNU6-1222P-201ENST00000384615 107 ntBASIC1.89□□□□□ -2.11
CDX4O14627 MIR489-201ENST00000384923 84 ntBASIC1.89□□□□□ -2.11
CDX4O14627 RNA5SP181-201ENST00000410246 98 ntBASIC1.89□□□□□ -2.11
CDX4O14627 RPS20P15-201ENST00000412792 311 ntBASIC1.89□□□□□ -2.11
CDX4O14627 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.89□□□□□ -2.11
CDX4O14627 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.89□□□□□ -2.11
CDX4O14627 RPS15AP10-201ENST00000432472 382 ntBASIC1.89□□□□□ -2.11
CDX4O14627 AL645568.3-201ENST00000433683 316 ntBASIC1.89□□□□□ -2.11
CDX4O14627 AC236972.2-201ENST00000434979 310 ntBASIC1.89□□□□□ -2.11
CDX4O14627 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.89□□□□□ -2.11
CDX4O14627 AC013470.1-201ENST00000453438 462 ntBASIC1.89□□□□□ -2.11
CDX4O14627 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.89□□□□□ -2.11
CDX4O14627 AK3P2-201ENST00000507976 429 ntBASIC1.89□□□□□ -2.11
CDX4O14627 RNU2-53P-201ENST00000516257 147 ntBASIC1.89□□□□□ -2.11
CDX4O14627 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.89□□□□□ -2.11
CDX4O14627 Y_RNA.701-201ENST00000516812 110 ntBASIC1.89□□□□□ -2.11
CDX4O14627 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.89□□□□□ -2.11
CDX4O14627 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.89□□□□□ -2.11
CDX4O14627 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.89□□□□□ -2.11
CDX4O14627 AC044792.1-201ENST00000593294 196 ntBASIC1.89□□□□□ -2.11
CDX4O14627 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.89□□□□□ -2.11
CDX4O14627 AL353621.2-201ENST00000605340 133 ntBASIC1.89□□□□□ -2.11
CDX4O14627 AL161423.1-201ENST00000613700 262 ntBASIC1.89□□□□□ -2.11
CDX4O14627 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.89□□□□□ -2.11
CDX4O14627 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
CDX4O14627 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
CDX4O14627 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
CDX4O14627 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC1.88□□□□□ -2.11
CDX4O14627 RNU6-1059P-201ENST00000363752 98 ntBASIC1.88□□□□□ -2.11
CDX4O14627 RNU6-1210P-201ENST00000363775 107 ntBASIC1.88□□□□□ -2.11
CDX4O14627 RNU6-1188P-201ENST00000363795 107 ntBASIC1.88□□□□□ -2.11
CDX4O14627 RNU4-76P-201ENST00000364509 141 ntBASIC1.88□□□□□ -2.11
CDX4O14627 SNORA25.9-201ENST00000365087 128 ntBASIC1.88□□□□□ -2.11
CDX4O14627 MIR517A-201ENST00000385001 87 ntBASIC1.88□□□□□ -2.11
CDX4O14627 Y_RNA.579-201ENST00000390939 94 ntBASIC1.88□□□□□ -2.11
CDX4O14627 AL627390.1-201ENST00000396055 340 ntBASIC1.88□□□□□ -2.11
CDX4O14627 RNU6-325P-201ENST00000411132 105 ntBASIC1.88□□□□□ -2.11
CDX4O14627 AL030996.1-201ENST00000411430 235 ntBASIC1.88□□□□□ -2.11
CDX4O14627 AL117339.3-201ENST00000418733 162 ntBASIC1.88□□□□□ -2.11
CDX4O14627 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.88□□□□□ -2.11
CDX4O14627 AF228730.4-201ENST00000421457 183 ntBASIC1.88□□□□□ -2.11
CDX4O14627 USP9YP30-201ENST00000430729 455 ntBASIC1.88□□□□□ -2.11
CDX4O14627 CR769767.1-201ENST00000436337 346 ntBASIC1.88□□□□□ -2.11
CDX4O14627 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.88□□□□□ -2.11
CDX4O14627 snoU13.14-201ENST00000459372 104 ntBASIC1.88□□□□□ -2.11
CDX4O14627 AL163540.1-201ENST00000485382 386 ntBASIC1.88□□□□□ -2.11
CDX4O14627 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC1.88□□□□□ -2.11
CDX4O14627 Y_RNA.670-201ENST00000516255 105 ntBASIC1.88□□□□□ -2.11
CDX4O14627 RNU1-54P-201ENST00000517181 120 ntBASIC1.88□□□□□ -2.11
CDX4O14627 TRAV32-201ENST00000553993 340 ntBASIC1.88□□□□□ -2.11
CDX4O14627 SUB1P3-201ENST00000564581 315 ntBASIC1.88□□□□□ -2.11
CDX4O14627 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.88□□□□□ -2.11
CDX4O14627 RPL30P11-203ENST00000598995 310 ntBASIC1.88□□□□□ -2.11
CDX4O14627 AL356157.2-201ENST00000605122 111 ntBASIC1.88□□□□□ -2.11
CDX4O14627 AL138963.2-201ENST00000605137 226 ntBASIC1.88□□□□□ -2.11
CDX4O14627 AC019193.3-201ENST00000609144 554 ntBASIC1.88□□□□□ -2.11
CDX4O14627 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.88□□□□□ -2.11
CDX4O14627 AC126177.8-201ENST00000618339 1015 ntBASIC1.88□□□□□ -2.11
CDX4O14627 U4atac.1-201ENST00000618345 95 ntBASIC1.88□□□□□ -2.11
CDX4O14627 AL160413.1-201ENST00000622780 310 ntBASIC1.88□□□□□ -2.11
CDX4O14627 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
CDX4O14627 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
CDX4O14627 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.87□□□□□ -2.11
CDX4O14627 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
CDX4O14627 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
CDX4O14627 Y_RNA.116-201ENST00000363292 103 ntBASIC1.87□□□□□ -2.11
CDX4O14627 RNU6-1317P-201ENST00000364582 104 ntBASIC1.87□□□□□ -2.11
CDX4O14627 Y_RNA.404-201ENST00000383978 102 ntBASIC1.87□□□□□ -2.11
CDX4O14627 RNY4P36-201ENST00000391116 96 ntBASIC1.87□□□□□ -2.11
CDX4O14627 SNORA75.4-201ENST00000391278 119 ntBASIC1.87□□□□□ -2.11
CDX4O14627 MTCYBP4-201ENST00000401524 249 ntBASIC1.87□□□□□ -2.11
CDX4O14627 RPS29P13-201ENST00000402041 169 ntBASIC1.87□□□□□ -2.11
CDX4O14627 RNU6-1050P-201ENST00000410388 107 ntBASIC1.87□□□□□ -2.11
CDX4O14627 RNU6-293P-201ENST00000411259 106 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms