Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 MTCO2P34-201ENST00000421994 607 ntBASIC1.86□□□□□ -2.11
CUX2O14529 MTCYBP8-201ENST00000422855 651 ntBASIC1.86□□□□□ -2.11
CUX2O14529 AC073464.1-201ENST00000429823 534 ntBASIC1.86□□□□□ -2.11
CUX2O14529 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC1.86□□□□□ -2.11
CUX2O14529 AC004223.2-201ENST00000590309 544 ntBASIC1.86□□□□□ -2.11
CUX2O14529 AL356157.2-201ENST00000605122 111 ntBASIC1.86□□□□□ -2.11
CUX2O14529 RN7SKP299-201ENST00000606679 301 ntBASIC1.86□□□□□ -2.11
CUX2O14529 AC002044.1-201ENST00000606707 158 ntBASIC1.86□□□□□ -2.11
CUX2O14529 AL773524.1-201ENST00000614065 229 ntBASIC1.86□□□□□ -2.11
CUX2O14529 AC097520.1-201ENST00000624435 385 ntBASIC1.86□□□□□ -2.11
CUX2O14529 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
CUX2O14529 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
CUX2O14529 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.85□□□□□ -2.11
CUX2O14529 Y_RNA.77-201ENST00000362962 107 ntBASIC1.85□□□□□ -2.11
CUX2O14529 Y_RNA.399-201ENST00000383955 105 ntBASIC1.85□□□□□ -2.11
CUX2O14529 RNU6-692P-201ENST00000384496 107 ntBASIC1.85□□□□□ -2.11
CUX2O14529 AL356432.1-201ENST00000405809 419 ntBASIC1.85□□□□□ -2.11
CUX2O14529 MIR1262-201ENST00000408276 93 ntBASIC1.85□□□□□ -2.11
CUX2O14529 AL356379.1-201ENST00000414105 126 ntBASIC1.85□□□□□ -2.11
CUX2O14529 AC078809.1-201ENST00000427601 140 ntBASIC1.85□□□□□ -2.11
CUX2O14529 AC015922.2-201ENST00000435593 184 ntBASIC1.85□□□□□ -2.11
CUX2O14529 AC244670.1-201ENST00000436879 112 ntBASIC1.85□□□□□ -2.11
CUX2O14529 AL163973.1-201ENST00000484753 577 ntBASIC1.85□□□□□ -2.11
CUX2O14529 AC010424.1-201ENST00000506336 297 ntBASIC1.85□□□□□ -2.11
CUX2O14529 MRPS17P9-201ENST00000511924 393 ntBASIC1.85□□□□□ -2.11
CUX2O14529 RNU11-2P-201ENST00000516898 142 ntBASIC1.85□□□□□ -2.11
CUX2O14529 SNORA25.17-201ENST00000517184 124 ntBASIC1.85□□□□□ -2.11
CUX2O14529 TRAV32-201ENST00000553993 340 ntBASIC1.85□□□□□ -2.11
CUX2O14529 AC103996.1-201ENST00000555468 102 ntBASIC1.85□□□□□ -2.11
CUX2O14529 AC109446.1-201ENST00000566172 220 ntBASIC1.85□□□□□ -2.11
CUX2O14529 MIR3136-201ENST00000583498 78 ntBASIC1.85□□□□□ -2.11
CUX2O14529 BNIP3P16-201ENST00000589779 534 ntBASIC1.85□□□□□ -2.11
CUX2O14529 AC087683.1-201ENST00000591187 441 ntBASIC1.85□□□□□ -2.11
CUX2O14529 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.85□□□□□ -2.11
CUX2O14529 RNU6-552P-201ENST00000362869 119 ntBASIC1.84□□□□□ -2.11
CUX2O14529 RNU6-1141P-201ENST00000364520 107 ntBASIC1.84□□□□□ -2.11
CUX2O14529 RNU6-43P-201ENST00000384302 107 ntBASIC1.84□□□□□ -2.11
CUX2O14529 RNU6-997P-201ENST00000384725 107 ntBASIC1.84□□□□□ -2.11
CUX2O14529 RNU7-167P-201ENST00000459160 62 ntBASIC1.84□□□□□ -2.11
CUX2O14529 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.84□□□□□ -2.11
CUX2O14529 AC093259.1-201ENST00000509755 300 ntBASIC1.84□□□□□ -2.11
CUX2O14529 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
CUX2O14529 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.84□□□□□ -2.11
CUX2O14529 CBX3P8-201ENST00000532412 525 ntBASIC1.84□□□□□ -2.11
CUX2O14529 AC018630.3-201ENST00000542637 96 ntBASIC1.84□□□□□ -2.11
CUX2O14529 HIF1AP1-201ENST00000553642 175 ntBASIC1.84□□□□□ -2.11
CUX2O14529 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.84□□□□□ -2.11
CUX2O14529 AC243960.4-201ENST00000600532 288 ntBASIC1.84□□□□□ -2.11
CUX2O14529 AC018889.1-201ENST00000605372 397 ntBASIC1.84□□□□□ -2.11
CUX2O14529 RNU6-85P-201ENST00000605989 107 ntBASIC1.84□□□□□ -2.11
CUX2O14529 SDR42E1P4-201ENST00000620894 481 ntBASIC1.84□□□□□ -2.11
CUX2O14529 MIR1248-201ENST00000629190 106 ntBASIC1.84□□□□□ -2.11
CUX2O14529 AC090582.1-201ENST00000636321 199 ntBASIC1.84□□□□□ -2.11
CUX2O14529 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
CUX2O14529 RNU6-336P-201ENST00000364891 107 ntBASIC1.83□□□□□ -2.12
CUX2O14529 RNU6-827P-201ENST00000365553 106 ntBASIC1.83□□□□□ -2.12
CUX2O14529 Y_RNA.390-201ENST00000383932 102 ntBASIC1.83□□□□□ -2.12
CUX2O14529 AL606923.1-201ENST00000406616 190 ntBASIC1.83□□□□□ -2.12
CUX2O14529 RNA5SP450-201ENST00000411206 102 ntBASIC1.83□□□□□ -2.12
CUX2O14529 CDK8P2-201ENST00000415020 547 ntBASIC1.83□□□□□ -2.12
CUX2O14529 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.83□□□□□ -2.12
CUX2O14529 AC013470.1-201ENST00000453438 462 ntBASIC1.83□□□□□ -2.12
CUX2O14529 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC1.83□□□□□ -2.12
CUX2O14529 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.83□□□□□ -2.12
CUX2O14529 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC1.83□□□□□ -2.12
CUX2O14529 MIR3923-201ENST00000579521 83 ntBASIC1.83□□□□□ -2.12
CUX2O14529 AP000654.2-201ENST00000605633 586 ntBASIC1.83□□□□□ -2.12
CUX2O14529 AL627230.6-201ENST00000611129 280 ntBASIC1.83□□□□□ -2.12
CUX2O14529 U1.36-201ENST00000620684 176 ntBASIC1.83□□□□□ -2.12
CUX2O14529 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
CUX2O14529 SNORD98-201ENST00000636377 67 ntBASIC1.83□□□□□ -2.12
CUX2O14529 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
CUX2O14529 RNU6-26P-201ENST00000383985 107 ntBASIC1.82□□□□□ -2.12
CUX2O14529 SNORD116-9-201ENST00000384000 95 ntBASIC1.82□□□□□ -2.12
CUX2O14529 SNORD116-3-201ENST00000384287 95 ntBASIC1.82□□□□□ -2.12
CUX2O14529 SNORD116-7-201ENST00000384404 95 ntBASIC1.82□□□□□ -2.12
CUX2O14529 SNORD116-5-201ENST00000384462 95 ntBASIC1.82□□□□□ -2.12
CUX2O14529 RPS29P13-201ENST00000402041 169 ntBASIC1.82□□□□□ -2.12
CUX2O14529 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.82□□□□□ -2.12
CUX2O14529 AL590135.1-201ENST00000422215 156 ntBASIC1.82□□□□□ -2.12
CUX2O14529 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC1.82□□□□□ -2.12
CUX2O14529 AC019205.3-201ENST00000424573 156 ntBASIC1.82□□□□□ -2.12
CUX2O14529 AL353689.1-201ENST00000438895 199 ntBASIC1.82□□□□□ -2.12
CUX2O14529 AC016700.2-201ENST00000446011 156 ntBASIC1.82□□□□□ -2.12
CUX2O14529 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.82□□□□□ -2.12
CUX2O14529 RPL31P3-201ENST00000458430 332 ntBASIC1.82□□□□□ -2.12
CUX2O14529 RNU6-333P-201ENST00000459117 107 ntBASIC1.82□□□□□ -2.12
CUX2O14529 RNA5SP57-201ENST00000459463 123 ntBASIC1.82□□□□□ -2.12
CUX2O14529 AC015911.1-201ENST00000495111 156 ntBASIC1.82□□□□□ -2.12
CUX2O14529 COPS8P3-201ENST00000526024 482 ntBASIC1.82□□□□□ -2.12
CUX2O14529 AP005597.4-201ENST00000526762 229 ntBASIC1.82□□□□□ -2.12
CUX2O14529 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.82□□□□□ -2.12
CUX2O14529 AGGF1P4-201ENST00000568249 801 ntBASIC1.82□□□□□ -2.12
CUX2O14529 Y_RNA.1-201ENST00000352915 104 ntBASIC1.82□□□□□ -2.12
CUX2O14529 RNU6-266P-201ENST00000364225 107 ntBASIC1.82□□□□□ -2.12
CUX2O14529 RNU1-78P-201ENST00000391248 165 ntBASIC1.82□□□□□ -2.12
CUX2O14529 AL158823.1-201ENST00000418441 478 ntBASIC1.82□□□□□ -2.12
CUX2O14529 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.82□□□□□ -2.12
CUX2O14529 RPS27P1-201ENST00000450552 247 ntBASIC1.82□□□□□ -2.12
CUX2O14529 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 126.5 ms