Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 Y_RNA.153-201ENST00000363615 91 ntBASIC2.89□□□□□ -1.95
FOXN3O00409 Y_RNA.512-201ENST00000384518 102 ntBASIC2.89□□□□□ -1.95
FOXN3O00409 RNU6-700P-201ENST00000391043 107 ntBASIC2.89□□□□□ -1.95
FOXN3O00409 SNORA26.3-201ENST00000391119 136 ntBASIC2.89□□□□□ -1.95
FOXN3O00409 AL139095.1-201ENST00000404326 391 ntBASIC2.89□□□□□ -1.95
FOXN3O00409 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.89□□□□□ -1.95
FOXN3O00409 MIR548F4-201ENST00000408515 105 ntBASIC2.89□□□□□ -1.95
FOXN3O00409 Y_RNA.597-201ENST00000410463 100 ntBASIC2.89□□□□□ -1.95
FOXN3O00409 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.89□□□□□ -1.95
FOXN3O00409 AL445305.1-201ENST00000432577 575 ntBASIC2.89□□□□□ -1.95
FOXN3O00409 IPO7P1-201ENST00000442031 636 ntBASIC2.89□□□□□ -1.95
FOXN3O00409 AP000705.1-201ENST00000454567 350 ntBASIC2.89□□□□□ -1.95
FOXN3O00409 RNU7-87P-201ENST00000459343 62 ntBASIC2.89□□□□□ -1.95
FOXN3O00409 AC080013.2-201ENST00000460866 323 ntBASIC2.89□□□□□ -1.95
FOXN3O00409 RPL30P10-201ENST00000488148 337 ntBASIC2.89□□□□□ -1.95
FOXN3O00409 RNU7-175P-201ENST00000515915 61 ntBASIC2.89□□□□□ -1.95
FOXN3O00409 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC2.89□□□□□ -1.95
FOXN3O00409 SUB1P3-201ENST00000564581 315 ntBASIC2.89□□□□□ -1.95
FOXN3O00409 CYP4A27P-201ENST00000567218 190 ntBASIC2.89□□□□□ -1.95
FOXN3O00409 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.89□□□□□ -1.95
FOXN3O00409 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC2.89□□□□□ -1.95
FOXN3O00409 MIR3671-201ENST00000580455 88 ntBASIC2.89□□□□□ -1.95
FOXN3O00409 AL355297.2-201ENST00000604792 129 ntBASIC2.89□□□□□ -1.95
FOXN3O00409 AC087588.2-201ENST00000617667 426 ntBASIC2.89□□□□□ -1.95
FOXN3O00409 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
FOXN3O00409 Y_RNA.455-201ENST00000384230 98 ntBASIC2.88□□□□□ -1.95
FOXN3O00409 RNU6-378P-201ENST00000384324 107 ntBASIC2.88□□□□□ -1.95
FOXN3O00409 SNORA46.1-201ENST00000391069 153 ntBASIC2.88□□□□□ -1.95
FOXN3O00409 RNA5SP21-201ENST00000410917 96 ntBASIC2.88□□□□□ -1.95
FOXN3O00409 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.88□□□□□ -1.95
FOXN3O00409 snoU13.30-201ENST00000458951 104 ntBASIC2.88□□□□□ -1.95
FOXN3O00409 RPL17P19-201ENST00000489069 552 ntBASIC2.88□□□□□ -1.95
FOXN3O00409 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2.88□□□□□ -1.95
FOXN3O00409 RNA5SP367-201ENST00000516557 118 ntBASIC2.88□□□□□ -1.95
FOXN3O00409 RNU6-635P-201ENST00000516651 102 ntBASIC2.88□□□□□ -1.95
FOXN3O00409 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.88□□□□□ -1.95
FOXN3O00409 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.88□□□□□ -1.95
FOXN3O00409 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.88□□□□□ -1.95
FOXN3O00409 MIR5701-3-201ENST00000578890 82 ntBASIC2.88□□□□□ -1.95
FOXN3O00409 AC113195.1-201ENST00000579952 141 ntBASIC2.88□□□□□ -1.95
FOXN3O00409 MIR5701-1-201ENST00000585138 82 ntBASIC2.88□□□□□ -1.95
FOXN3O00409 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.88□□□□□ -1.95
FOXN3O00409 MIR5701-2-201ENST00000615634 82 ntBASIC2.88□□□□□ -1.95
FOXN3O00409 AC010205.1-201ENST00000616668 449 ntBASIC2.88□□□□□ -1.95
FOXN3O00409 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.88□□□□□ -1.95
FOXN3O00409 SCARNA4-201ENST00000629045 128 ntBASIC2.88□□□□□ -1.95
FOXN3O00409 AL137790.1-201ENST00000634283 177 ntBASIC2.88□□□□□ -1.95
FOXN3O00409 FO624990.1-201ENST00000636373 85 ntBASIC2.88□□□□□ -1.95
FOXN3O00409 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.88□□□□□ -1.95
FOXN3O00409 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.88□□□□□ -1.95
FOXN3O00409 Y_RNA.39-201ENST00000362620 98 ntBASIC2.87□□□□□ -1.95
FOXN3O00409 Y_RNA.47-201ENST00000362697 108 ntBASIC2.87□□□□□ -1.95
FOXN3O00409 MIR29B2-201ENST00000385055 81 ntBASIC2.87□□□□□ -1.95
FOXN3O00409 RNU6-1156P-201ENST00000410365 100 ntBASIC2.87□□□□□ -1.95
FOXN3O00409 MTCYBP9-201ENST00000431021 303 ntBASIC2.87□□□□□ -1.95
FOXN3O00409 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.87□□□□□ -1.95
FOXN3O00409 AC099799.1-201ENST00000439809 192 ntBASIC2.87□□□□□ -1.95
FOXN3O00409 RNU7-26P-201ENST00000458980 63 ntBASIC2.87□□□□□ -1.95
FOXN3O00409 U8.20-201ENST00000459445 131 ntBASIC2.87□□□□□ -1.95
FOXN3O00409 AP001486.1-201ENST00000463339 476 ntBASIC2.87□□□□□ -1.95
FOXN3O00409 AL049873.1-201ENST00000480540 376 ntBASIC2.87□□□□□ -1.95
FOXN3O00409 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.87□□□□□ -1.95
FOXN3O00409 RNU6-965P-201ENST00000516721 96 ntBASIC2.87□□□□□ -1.95
FOXN3O00409 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.87□□□□□ -1.95
FOXN3O00409 AC004584.2-201ENST00000570407 410 ntBASIC2.87□□□□□ -1.95
FOXN3O00409 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.87□□□□□ -1.95
FOXN3O00409 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.87□□□□□ -1.95
FOXN3O00409 AL606534.2-204ENST00000635008 178 ntBASIC2.87□□□□□ -1.95
FOXN3O00409 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.87□□□□□ -1.95
FOXN3O00409 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
FOXN3O00409 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.87□□□□□ -1.95
FOXN3O00409 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
FOXN3O00409 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
FOXN3O00409 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.86□□□□□ -1.95
FOXN3O00409 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.86□□□□□ -1.95
FOXN3O00409 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
FOXN3O00409 RNU6-944P-201ENST00000364023 107 ntBASIC2.86□□□□□ -1.95
FOXN3O00409 RNU6-541P-201ENST00000384709 110 ntBASIC2.86□□□□□ -1.95
FOXN3O00409 SNORA12.2-201ENST00000391040 156 ntBASIC2.86□□□□□ -1.95
FOXN3O00409 MTCYBP2-201ENST00000407745 171 ntBASIC2.86□□□□□ -1.95
FOXN3O00409 CEP57L1P1-201ENST00000430943 1201 ntBASIC2.86□□□□□ -1.95
FOXN3O00409 AL161788.1-201ENST00000441805 169 ntBASIC2.86□□□□□ -1.95
FOXN3O00409 CYP2C59P-201ENST00000457790 269 ntBASIC2.86□□□□□ -1.95
FOXN3O00409 RN7SKP210-201ENST00000459176 261 ntBASIC2.86□□□□□ -1.95
FOXN3O00409 RN7SKP132-201ENST00000516001 208 ntBASIC2.86□□□□□ -1.95
FOXN3O00409 MIR449C-201ENST00000516047 92 ntBASIC2.86□□□□□ -1.95
FOXN3O00409 Y_RNA.706-201ENST00000516933 99 ntBASIC2.86□□□□□ -1.95
FOXN3O00409 RNU1-104P-201ENST00000517280 175 ntBASIC2.86□□□□□ -1.95
FOXN3O00409 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.86□□□□□ -1.95
FOXN3O00409 MIR3149-201ENST00000584629 83 ntBASIC2.86□□□□□ -1.95
FOXN3O00409 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
FOXN3O00409 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
FOXN3O00409 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.85□□□□□ -1.95
FOXN3O00409 RNU4-42P-201ENST00000364738 142 ntBASIC2.85□□□□□ -1.95
FOXN3O00409 RNU1-115P-201ENST00000365329 160 ntBASIC2.85□□□□□ -1.95
FOXN3O00409 RNU6-1072P-201ENST00000384703 107 ntBASIC2.85□□□□□ -1.95
FOXN3O00409 RNU6-443P-201ENST00000384780 107 ntBASIC2.85□□□□□ -1.95
FOXN3O00409 RNU6-823P-201ENST00000391042 103 ntBASIC2.85□□□□□ -1.95
FOXN3O00409 RNU6-101P-201ENST00000410323 104 ntBASIC2.85□□□□□ -1.95
FOXN3O00409 AC007098.1-201ENST00000420122 367 ntBASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 130.7 ms