Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.13□□□□□ -2.07
O00370 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.13□□□□□ -2.07
O00370 AL121579.1-201ENST00000555129 305 ntBASIC2.13□□□□□ -2.07
O00370 MIR5089-201ENST00000580047 84 ntBASIC2.13□□□□□ -2.07
O00370 MIR3136-201ENST00000583498 78 ntBASIC2.13□□□□□ -2.07
O00370 AL162373.1-201ENST00000620433 407 ntBASIC2.13□□□□□ -2.07
O00370 AC098657.3-201ENST00000620434 263 ntBASIC2.13□□□□□ -2.07
O00370 TPTEP1-208ENST00000636884 213 ntBASIC2.13□□□□□ -2.07
O00370 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
O00370 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.12□□□□□ -2.07
O00370 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
O00370 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
O00370 SNORD81.2-201ENST00000365153 76 ntBASIC2.12□□□□□ -2.07
O00370 MIR504-201ENST00000385065 83 ntBASIC2.12□□□□□ -2.07
O00370 SNORA46.1-201ENST00000391069 153 ntBASIC2.12□□□□□ -2.07
O00370 SUMO2P12-201ENST00000405924 140 ntBASIC2.12□□□□□ -2.07
O00370 RNU2-32P-201ENST00000411193 191 ntBASIC2.12□□□□□ -2.07
O00370 RPL37P10-201ENST00000412884 288 ntBASIC2.12□□□□□ -2.07
O00370 AC074085.1-201ENST00000413598 418 ntBASIC2.12□□□□□ -2.07
O00370 EIF1AXP1-201ENST00000419267 435 ntBASIC2.12□□□□□ -2.07
O00370 AC078809.1-201ENST00000427601 140 ntBASIC2.12□□□□□ -2.07
O00370 USP9YP30-201ENST00000430729 455 ntBASIC2.12□□□□□ -2.07
O00370 AL133396.1-201ENST00000432048 687 ntBASIC2.12□□□□□ -2.07
O00370 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
O00370 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.12□□□□□ -2.07
O00370 DAP3P1-201ENST00000441522 278 ntBASIC2.12□□□□□ -2.07
O00370 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC2.12□□□□□ -2.07
O00370 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.12□□□□□ -2.07
O00370 HMGN1P12-201ENST00000499125 195 ntBASIC2.12□□□□□ -2.07
O00370 RNA5SP137-201ENST00000516833 135 ntBASIC2.12□□□□□ -2.07
O00370 AC021231.3-201ENST00000558497 370 ntBASIC2.12□□□□□ -2.07
O00370 ANP32BP3-201ENST00000559213 706 ntBASIC2.12□□□□□ -2.07
O00370 CPDP1-201ENST00000579660 283 ntBASIC2.12□□□□□ -2.07
O00370 MIR4273-201ENST00000582824 84 ntBASIC2.12□□□□□ -2.07
O00370 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.12□□□□□ -2.07
O00370 AL158827.2-201ENST00000602494 330 ntBASIC2.12□□□□□ -2.07
O00370 AL078605.1-201ENST00000603529 500 ntBASIC2.12□□□□□ -2.07
O00370 AL356157.2-201ENST00000605122 111 ntBASIC2.12□□□□□ -2.07
O00370 SDR42E1P4-201ENST00000620894 481 ntBASIC2.12□□□□□ -2.07
O00370 AL691447.3-201ENST00000635020 330 ntBASIC2.12□□□□□ -2.07
O00370 AC233981.2-201ENST00000611524 1614 ntBASIC2.12□□□□□ -2.07
O00370 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.12□□□□□ -2.07
O00370 ZNF702P-202ENST00000434269 1966 ntBASIC2.12□□□□□ -2.07
O00370 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.12□□□□□ -2.07
O00370 AP000560.1-201ENST00000624150 1937 ntBASIC2.11□□□□□ -2.07
O00370 RNU4-15P-201ENST00000362613 141 ntBASIC2.11□□□□□ -2.07
O00370 RNU6-601P-201ENST00000384540 107 ntBASIC2.11□□□□□ -2.07
O00370 MIR95-201ENST00000385072 81 ntBASIC2.11□□□□□ -2.07
O00370 HMGN2P39-201ENST00000398005 273 ntBASIC2.11□□□□□ -2.07
O00370 RNA5SP494-201ENST00000410653 129 ntBASIC2.11□□□□□ -2.07
O00370 RNU6-1304P-201ENST00000411374 106 ntBASIC2.11□□□□□ -2.07
O00370 AL356379.1-201ENST00000414105 126 ntBASIC2.11□□□□□ -2.07
O00370 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.11□□□□□ -2.07
O00370 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC2.11□□□□□ -2.07
O00370 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.11□□□□□ -2.07
O00370 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC2.11□□□□□ -2.07
O00370 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.11□□□□□ -2.07
O00370 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.11□□□□□ -2.07
O00370 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.11□□□□□ -2.07
O00370 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.11□□□□□ -2.07
O00370 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2.11□□□□□ -2.07
O00370 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.11□□□□□ -2.07
O00370 AC233702.2-202ENST00000562547 291 ntBASIC2.11□□□□□ -2.07
O00370 AC026271.5-201ENST00000577873 130 ntBASIC2.11□□□□□ -2.07
O00370 MIR3923-201ENST00000579521 83 ntBASIC2.11□□□□□ -2.07
O00370 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
O00370 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
O00370 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.1□□□□□ -2.07
O00370 Y_RNA.48-201ENST00000362710 103 ntBASIC2.1□□□□□ -2.07
O00370 SNORA29-201ENST00000384183 140 ntBASIC2.1□□□□□ -2.07
O00370 MIR1289-2-201ENST00000408360 111 ntBASIC2.1□□□□□ -2.07
O00370 MIR548K-201ENST00000408406 116 ntBASIC2.1□□□□□ -2.07
O00370 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.1□□□□□ -2.07
O00370 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.1□□□□□ -2.07
O00370 RN7SL274P-201ENST00000492268 272 ntBASIC2.1□□□□□ -2.07
O00370 AC022447.4-201ENST00000504053 364 ntBASIC2.1□□□□□ -2.07
O00370 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.1□□□□□ -2.07
O00370 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.1□□□□□ -2.07
O00370 AC116337.1-201ENST00000509680 687 ntBASIC2.1□□□□□ -2.07
O00370 RNU6-1016P-201ENST00000516689 94 ntBASIC2.1□□□□□ -2.07
O00370 MIR514B-201ENST00000516774 80 ntBASIC2.1□□□□□ -2.07
O00370 AC034114.1-201ENST00000520293 285 ntBASIC2.1□□□□□ -2.07
O00370 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.1□□□□□ -2.07
O00370 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.1□□□□□ -2.07
O00370 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.1□□□□□ -2.07
O00370 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
O00370 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
O00370 Y_RNA.2-201ENST00000362330 96 ntBASIC2.09□□□□□ -2.07
O00370 SNORD115-3-201ENST00000363100 82 ntBASIC2.09□□□□□ -2.07
O00370 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
O00370 RNU6-546P-201ENST00000383991 107 ntBASIC2.09□□□□□ -2.07
O00370 MIR549A-201ENST00000385268 96 ntBASIC2.09□□□□□ -2.07
O00370 RNU6-1093P-201ENST00000391194 107 ntBASIC2.09□□□□□ -2.07
O00370 AL356432.1-201ENST00000405809 419 ntBASIC2.09□□□□□ -2.07
O00370 MTND4LP11-201ENST00000422184 280 ntBASIC2.09□□□□□ -2.07
O00370 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.09□□□□□ -2.07
O00370 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.09□□□□□ -2.07
O00370 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.09□□□□□ -2.07
O00370 RNU6-507P-201ENST00000516045 100 ntBASIC2.09□□□□□ -2.07
O00370 RNU6-567P-201ENST00000516746 107 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 132.9 ms