Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 AC146944.4-201ENST00000602697 718 ntBASIC1.73□□□□□ -2.13
NPIPA2E9PIF3 MIR3976-201ENST00000606807 139 ntBASIC1.73□□□□□ -2.13
NPIPA2E9PIF3 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.73□□□□□ -2.13
NPIPA2E9PIF3 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.73□□□□□ -2.13
NPIPA2E9PIF3 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.72□□□□□ -2.13
NPIPA2E9PIF3 SNORD113-7-201ENST00000363762 77 ntBASIC1.72□□□□□ -2.13
NPIPA2E9PIF3 SNORD114-6-201ENST00000364393 72 ntBASIC1.72□□□□□ -2.13
NPIPA2E9PIF3 SNORA29-201ENST00000384183 140 ntBASIC1.72□□□□□ -2.13
NPIPA2E9PIF3 RNU6-933P-201ENST00000384424 107 ntBASIC1.72□□□□□ -2.13
NPIPA2E9PIF3 RNU6-160P-201ENST00000384591 107 ntBASIC1.72□□□□□ -2.13
NPIPA2E9PIF3 SNORD115-47-201ENST00000391226 86 ntBASIC1.72□□□□□ -2.13
NPIPA2E9PIF3 AL033519.2-201ENST00000403958 392 ntBASIC1.72□□□□□ -2.13
NPIPA2E9PIF3 MIR548F1-201ENST00000408667 84 ntBASIC1.72□□□□□ -2.13
NPIPA2E9PIF3 RNA5SP338-201ENST00000410495 85 ntBASIC1.72□□□□□ -2.13
NPIPA2E9PIF3 RNA5SP489-201ENST00000410986 109 ntBASIC1.72□□□□□ -2.13
NPIPA2E9PIF3 MTCO1P21-201ENST00000416634 589 ntBASIC1.72□□□□□ -2.13
NPIPA2E9PIF3 AL590632.1-201ENST00000424289 371 ntBASIC1.72□□□□□ -2.13
NPIPA2E9PIF3 AC003989.2-201ENST00000440224 169 ntBASIC1.72□□□□□ -2.13
NPIPA2E9PIF3 SNRPEP8-201ENST00000442866 260 ntBASIC1.72□□□□□ -2.13
NPIPA2E9PIF3 MTCO1P29-201ENST00000496868 288 ntBASIC1.72□□□□□ -2.13
NPIPA2E9PIF3 AC091435.1-201ENST00000505442 584 ntBASIC1.72□□□□□ -2.13
NPIPA2E9PIF3 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.72□□□□□ -2.13
NPIPA2E9PIF3 ATP5EP1-201ENST00000510257 156 ntBASIC1.72□□□□□ -2.13
NPIPA2E9PIF3 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.72□□□□□ -2.13
NPIPA2E9PIF3 RNU5F-4P-201ENST00000516581 114 ntBASIC1.72□□□□□ -2.13
NPIPA2E9PIF3 RNU6-1098P-201ENST00000516772 96 ntBASIC1.72□□□□□ -2.13
NPIPA2E9PIF3 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.72□□□□□ -2.13
NPIPA2E9PIF3 MIR3122-201ENST00000577243 73 ntBASIC1.72□□□□□ -2.13
NPIPA2E9PIF3 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.72□□□□□ -2.13
NPIPA2E9PIF3 AC233981.2-201ENST00000611524 1614 ntBASIC1.72□□□□□ -2.13
NPIPA2E9PIF3 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
NPIPA2E9PIF3 Y_RNA.89-201ENST00000363031 102 ntBASIC1.71□□□□□ -2.14
NPIPA2E9PIF3 Y_RNA.140-201ENST00000363474 103 ntBASIC1.71□□□□□ -2.14
NPIPA2E9PIF3 Y_RNA.151-201ENST00000363566 112 ntBASIC1.71□□□□□ -2.14
NPIPA2E9PIF3 RNU6-790P-201ENST00000384479 105 ntBASIC1.71□□□□□ -2.14
NPIPA2E9PIF3 RNU7-14P-201ENST00000459331 62 ntBASIC1.71□□□□□ -2.14
NPIPA2E9PIF3 AC092989.1-201ENST00000481235 277 ntBASIC1.71□□□□□ -2.14
NPIPA2E9PIF3 AC114801.2-201ENST00000503825 781 ntBASIC1.71□□□□□ -2.14
NPIPA2E9PIF3 AC096745.1-201ENST00000509945 370 ntBASIC1.71□□□□□ -2.14
NPIPA2E9PIF3 AC005741.1-201ENST00000511094 432 ntBASIC1.71□□□□□ -2.14
NPIPA2E9PIF3 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.71□□□□□ -2.14
NPIPA2E9PIF3 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.71□□□□□ -2.14
NPIPA2E9PIF3 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.71□□□□□ -2.14
NPIPA2E9PIF3 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.71□□□□□ -2.14
NPIPA2E9PIF3 CPDP1-201ENST00000579660 283 ntBASIC1.71□□□□□ -2.14
NPIPA2E9PIF3 MIR3935-201ENST00000583472 104 ntBASIC1.71□□□□□ -2.14
NPIPA2E9PIF3 AC130454.1-201ENST00000622948 401 ntBASIC1.71□□□□□ -2.14
NPIPA2E9PIF3 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.7□□□□□ -2.14
NPIPA2E9PIF3 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.7□□□□□ -2.14
NPIPA2E9PIF3 RNU1-17P-201ENST00000363022 152 ntBASIC1.7□□□□□ -2.14
NPIPA2E9PIF3 RNU6-23P-201ENST00000363283 107 ntBASIC1.7□□□□□ -2.14
NPIPA2E9PIF3 Y_RNA.295-201ENST00000364918 102 ntBASIC1.7□□□□□ -2.14
NPIPA2E9PIF3 RNU6-438P-201ENST00000365561 103 ntBASIC1.7□□□□□ -2.14
NPIPA2E9PIF3 RNU6-877P-201ENST00000383868 107 ntBASIC1.7□□□□□ -2.14
NPIPA2E9PIF3 Y_RNA.453-201ENST00000384223 109 ntBASIC1.7□□□□□ -2.14
NPIPA2E9PIF3 MIR549A-201ENST00000385268 96 ntBASIC1.7□□□□□ -2.14
NPIPA2E9PIF3 RNA5SP213-201ENST00000391031 106 ntBASIC1.7□□□□□ -2.14
NPIPA2E9PIF3 RNA5SP494-201ENST00000410653 129 ntBASIC1.7□□□□□ -2.14
NPIPA2E9PIF3 RNA5SP501-201ENST00000410990 112 ntBASIC1.7□□□□□ -2.14
NPIPA2E9PIF3 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC1.7□□□□□ -2.14
NPIPA2E9PIF3 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC1.7□□□□□ -2.14
NPIPA2E9PIF3 Z82205.1-201ENST00000428456 297 ntBASIC1.7□□□□□ -2.14
NPIPA2E9PIF3 MTCO3P18-201ENST00000440206 761 ntBASIC1.7□□□□□ -2.14
NPIPA2E9PIF3 AL035666.1-201ENST00000446195 348 ntBASIC1.7□□□□□ -2.14
NPIPA2E9PIF3 RNA5SP57-201ENST00000459463 123 ntBASIC1.7□□□□□ -2.14
NPIPA2E9PIF3 AC007547.1-201ENST00000462177 490 ntBASIC1.7□□□□□ -2.14
NPIPA2E9PIF3 RN7SL274P-201ENST00000492268 272 ntBASIC1.7□□□□□ -2.14
NPIPA2E9PIF3 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.7□□□□□ -2.14
NPIPA2E9PIF3 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.7□□□□□ -2.14
NPIPA2E9PIF3 RNU6-718P-201ENST00000516166 105 ntBASIC1.7□□□□□ -2.14
NPIPA2E9PIF3 RNA5SP458-201ENST00000516188 119 ntBASIC1.7□□□□□ -2.14
NPIPA2E9PIF3 RNU6-273P-201ENST00000516937 96 ntBASIC1.7□□□□□ -2.14
NPIPA2E9PIF3 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.7□□□□□ -2.14
NPIPA2E9PIF3 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.7□□□□□ -2.14
NPIPA2E9PIF3 AC022254.1-201ENST00000567857 235 ntBASIC1.7□□□□□ -2.14
NPIPA2E9PIF3 MIR4713-201ENST00000582691 75 ntBASIC1.7□□□□□ -2.14
NPIPA2E9PIF3 MIR3672-201ENST00000584290 82 ntBASIC1.7□□□□□ -2.14
NPIPA2E9PIF3 AC009994.1-201ENST00000606889 253 ntBASIC1.7□□□□□ -2.14
NPIPA2E9PIF3 MIR8076-201ENST00000611401 83 ntBASIC1.7□□□□□ -2.14
NPIPA2E9PIF3 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.7□□□□□ -2.14
NPIPA2E9PIF3 RMST_6.1-201ENST00000611980 203 ntBASIC1.7□□□□□ -2.14
NPIPA2E9PIF3 AL590240.4-201ENST00000616908 390 ntBASIC1.7□□□□□ -2.14
NPIPA2E9PIF3 AC090617.10-201ENST00000624308 134 ntBASIC1.7□□□□□ -2.14
NPIPA2E9PIF3 AC100810.6-201ENST00000638068 285 ntBASIC1.7□□□□□ -2.14
NPIPA2E9PIF3 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC1.7□□□□□ -2.14
NPIPA2E9PIF3 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.7□□□□□ -2.14
NPIPA2E9PIF3 RNA5SP493-201ENST00000364115 91 ntBASIC1.69□□□□□ -2.14
NPIPA2E9PIF3 SNORA18.2-201ENST00000383865 132 ntBASIC1.69□□□□□ -2.14
NPIPA2E9PIF3 RNU6-128P-201ENST00000383976 107 ntBASIC1.69□□□□□ -2.14
NPIPA2E9PIF3 RNU6-968P-201ENST00000384076 107 ntBASIC1.69□□□□□ -2.14
NPIPA2E9PIF3 Y_RNA.530-201ENST00000384587 101 ntBASIC1.69□□□□□ -2.14
NPIPA2E9PIF3 RNU6-95P-201ENST00000384697 107 ntBASIC1.69□□□□□ -2.14
NPIPA2E9PIF3 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
NPIPA2E9PIF3 SNORA12.2-201ENST00000391040 156 ntBASIC1.69□□□□□ -2.14
NPIPA2E9PIF3 SUMO2P12-201ENST00000405924 140 ntBASIC1.69□□□□□ -2.14
NPIPA2E9PIF3 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.69□□□□□ -2.14
NPIPA2E9PIF3 HSPE1P21-201ENST00000438283 308 ntBASIC1.69□□□□□ -2.14
NPIPA2E9PIF3 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.69□□□□□ -2.14
NPIPA2E9PIF3 MTND1P11-201ENST00000456661 876 ntBASIC1.69□□□□□ -2.14
NPIPA2E9PIF3 RNU7-66P-201ENST00000459469 62 ntBASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 174.6 ms