Protein–RNA interactions for Protein: A8TX70

COL6A5, Collagen alpha-5(VI) chain, humanhuman

Predictions only

Length 2,615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5A8TX70 AC011458.1-201ENST00000604034 617 ntBASIC-0.52□□□□□ -2.49
COL6A5A8TX70 AC004805.2-201ENST00000605382 482 ntBASIC-0.52□□□□□ -2.49
COL6A5A8TX70 RNU6-161P-201ENST00000363051 106 ntBASIC-0.52□□□□□ -2.49
COL6A5A8TX70 SNORD18.1-201ENST00000363807 70 ntBASIC-0.52□□□□□ -2.49
COL6A5A8TX70 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.52□□□□□ -2.49
COL6A5A8TX70 AC104332.1-201ENST00000440471 797 ntBASIC-0.52□□□□□ -2.49
COL6A5A8TX70 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC-0.52□□□□□ -2.49
COL6A5A8TX70 AC104982.1-201ENST00000478775 574 ntBASIC-0.52□□□□□ -2.49
COL6A5A8TX70 RNU6-1095P-201ENST00000516148 108 ntBASIC-0.52□□□□□ -2.49
COL6A5A8TX70 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC-0.52□□□□□ -2.49
COL6A5A8TX70 AL162726.3-218ENST00000636401 95 ntBASIC-0.52□□□□□ -2.49
COL6A5A8TX70 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.53□□□□□ -2.49
COL6A5A8TX70 FGFR1OP2P1-201ENST00000395943 500 ntBASIC-0.53□□□□□ -2.49
COL6A5A8TX70 MIR888-201ENST00000401186 77 ntBASIC-0.53□□□□□ -2.49
COL6A5A8TX70 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC-0.53□□□□□ -2.49
COL6A5A8TX70 AL603758.1-201ENST00000618654 241 ntBASIC-0.53□□□□□ -2.49
COL6A5A8TX70 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC-0.53□□□□□ -2.49
COL6A5A8TX70 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC-0.53□□□□□ -2.49
COL6A5A8TX70 Y_RNA.5-201ENST00000362334 102 ntBASIC-0.53□□□□□ -2.49
COL6A5A8TX70 RNY3P11-201ENST00000364153 102 ntBASIC-0.53□□□□□ -2.49
COL6A5A8TX70 SNORA25.7-201ENST00000364375 127 ntBASIC-0.53□□□□□ -2.49
COL6A5A8TX70 Y_RNA.423-201ENST00000384057 113 ntBASIC-0.53□□□□□ -2.49
COL6A5A8TX70 RNA5SP111-201ENST00000411386 101 ntBASIC-0.53□□□□□ -2.49
COL6A5A8TX70 MTCYBP11-201ENST00000447254 1109 ntBASIC-0.53□□□□□ -2.49
COL6A5A8TX70 MTCO3P10-201ENST00000455912 772 ntBASIC-0.53□□□□□ -2.49
COL6A5A8TX70 SNORA18.4-201ENST00000516440 124 ntBASIC-0.53□□□□□ -2.49
COL6A5A8TX70 RNU6-667P-201ENST00000517186 102 ntBASIC-0.53□□□□□ -2.49
COL6A5A8TX70 UBE2Q2P8-201ENST00000560644 102 ntBASIC-0.53□□□□□ -2.49
COL6A5A8TX70 AL161729.4-201ENST00000604650 476 ntBASIC-0.53□□□□□ -2.49
COL6A5A8TX70 MIR664B-201ENST00000626756 61 ntBASIC-0.53□□□□□ -2.49
COL6A5A8TX70 RAC1P6-201ENST00000423911 575 ntBASIC-0.54□□□□□ -2.5
COL6A5A8TX70 C8orf59P1-201ENST00000429930 303 ntBASIC-0.54□□□□□ -2.5
COL6A5A8TX70 AL133217.1-201ENST00000450980 425 ntBASIC-0.54□□□□□ -2.5
COL6A5A8TX70 HMGB1P28-201ENST00000507778 552 ntBASIC-0.54□□□□□ -2.5
COL6A5A8TX70 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC-0.54□□□□□ -2.5
COL6A5A8TX70 PRELID3BP2-201ENST00000605362 201 ntBASIC-0.54□□□□□ -2.5
COL6A5A8TX70 AL390208.1-201ENST00000605885 644 ntBASIC-0.54□□□□□ -2.5
COL6A5A8TX70 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-0.54□□□□□ -2.5
COL6A5A8TX70 Y_RNA.2-201ENST00000362330 96 ntBASIC-0.54□□□□□ -2.5
COL6A5A8TX70 RNY1P11-201ENST00000363759 113 ntBASIC-0.54□□□□□ -2.5
COL6A5A8TX70 RNU6-1322P-201ENST00000364309 107 ntBASIC-0.54□□□□□ -2.5
COL6A5A8TX70 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.54□□□□□ -2.5
COL6A5A8TX70 MIR1185-1-201ENST00000408598 86 ntBASIC-0.54□□□□□ -2.5
COL6A5A8TX70 AC010385.1-201ENST00000412374 256 ntBASIC-0.54□□□□□ -2.5
COL6A5A8TX70 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC-0.54□□□□□ -2.5
COL6A5A8TX70 ELOCP24-201ENST00000456370 334 ntBASIC-0.54□□□□□ -2.5
COL6A5A8TX70 AC112771.1-201ENST00000463581 102 ntBASIC-0.54□□□□□ -2.5
COL6A5A8TX70 RNU5A-4P-201ENST00000516588 111 ntBASIC-0.54□□□□□ -2.5
COL6A5A8TX70 SNORA25.18-201ENST00000607153 114 ntBASIC-0.54□□□□□ -2.5
COL6A5A8TX70 U6.48-201ENST00000618523 106 ntBASIC-0.54□□□□□ -2.5
COL6A5A8TX70 SNORD3E-202ENST00000627253 216 ntBASIC-0.54□□□□□ -2.5
COL6A5A8TX70 AC068205.3-201ENST00000636385 468 ntBASIC-0.54□□□□□ -2.5
COL6A5A8TX70 MIR382-201ENST00000637119 76 ntBASIC-0.54□□□□□ -2.5
COL6A5A8TX70 RNA5SP493-201ENST00000364115 91 ntBASIC-0.55□□□□□ -2.5
COL6A5A8TX70 Y_RNA.512-201ENST00000384518 102 ntBASIC-0.55□□□□□ -2.5
COL6A5A8TX70 SNORA40.8-201ENST00000411034 126 ntBASIC-0.55□□□□□ -2.5
COL6A5A8TX70 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC-0.55□□□□□ -2.5
COL6A5A8TX70 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC-0.55□□□□□ -2.5
COL6A5A8TX70 MTND1P28-201ENST00000435623 950 ntBASIC-0.55□□□□□ -2.5
COL6A5A8TX70 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC-0.55□□□□□ -2.5
COL6A5A8TX70 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC-0.55□□□□□ -2.5
COL6A5A8TX70 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC-0.55□□□□□ -2.5
COL6A5A8TX70 AC027419.1-201ENST00000522976 328 ntBASIC-0.55□□□□□ -2.5
COL6A5A8TX70 HMGB1P33-201ENST00000563485 527 ntBASIC-0.55□□□□□ -2.5
COL6A5A8TX70 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC-0.55□□□□□ -2.5
COL6A5A8TX70 AC023824.3-201ENST00000569003 562 ntBASIC-0.55□□□□□ -2.5
COL6A5A8TX70 AC126365.2-201ENST00000580630 379 ntBASIC-0.55□□□□□ -2.5
COL6A5A8TX70 AC068790.2-201ENST00000602601 557 ntBASIC-0.55□□□□□ -2.5
COL6A5A8TX70 AC135803.1-201ENST00000608748 565 ntBASIC-0.55□□□□□ -2.5
COL6A5A8TX70 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.55□□□□□ -2.5
COL6A5A8TX70 RNU6-727P-201ENST00000363592 107 ntBASIC-0.55□□□□□ -2.5
COL6A5A8TX70 Y_RNA.564-201ENST00000384708 106 ntBASIC-0.55□□□□□ -2.5
COL6A5A8TX70 MIR487A-201ENST00000385009 80 ntBASIC-0.55□□□□□ -2.5
COL6A5A8TX70 MIR563-201ENST00000385080 79 ntBASIC-0.55□□□□□ -2.5
COL6A5A8TX70 SNORD105-201ENST00000386910 85 ntBASIC-0.55□□□□□ -2.5
COL6A5A8TX70 RNU6-127P-201ENST00000390897 107 ntBASIC-0.55□□□□□ -2.5
COL6A5A8TX70 PRRC2CP1-201ENST00000404428 159 ntBASIC-0.55□□□□□ -2.5
COL6A5A8TX70 AL353813.1-201ENST00000440700 253 ntBASIC-0.55□□□□□ -2.5
COL6A5A8TX70 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC-0.55□□□□□ -2.5
COL6A5A8TX70 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC-0.55□□□□□ -2.5
COL6A5A8TX70 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC-0.55□□□□□ -2.5
COL6A5A8TX70 RNA5SP437-201ENST00000517249 129 ntBASIC-0.55□□□□□ -2.5
COL6A5A8TX70 AC027449.1-201ENST00000608890 407 ntBASIC-0.55□□□□□ -2.5
COL6A5A8TX70 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.56□□□□□ -2.5
COL6A5A8TX70 RNU6-83P-201ENST00000384568 112 ntBASIC-0.56□□□□□ -2.5
COL6A5A8TX70 AL139396.1-201ENST00000421137 167 ntBASIC-0.56□□□□□ -2.5
COL6A5A8TX70 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC-0.56□□□□□ -2.5
COL6A5A8TX70 OFD1P4Y-201ENST00000455273 1179 ntBASIC-0.56□□□□□ -2.5
COL6A5A8TX70 RPS20P24-201ENST00000457473 361 ntBASIC-0.56□□□□□ -2.5
COL6A5A8TX70 NDUFA4P2-201ENST00000489989 244 ntBASIC-0.56□□□□□ -2.5
COL6A5A8TX70 AC108019.1-201ENST00000512540 175 ntBASIC-0.56□□□□□ -2.5
COL6A5A8TX70 RNY4P37-201ENST00000516225 96 ntBASIC-0.56□□□□□ -2.5
COL6A5A8TX70 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC-0.56□□□□□ -2.5
COL6A5A8TX70 AK6P2-201ENST00000549020 471 ntBASIC-0.56□□□□□ -2.5
COL6A5A8TX70 MIR4504-201ENST00000577413 92 ntBASIC-0.56□□□□□ -2.5
COL6A5A8TX70 AP005212.4-201ENST00000614206 710 ntBASIC-0.56□□□□□ -2.5
COL6A5A8TX70 VPS35-212ENST00000640313 141 ntTSL 5 BASIC-0.56□□□□□ -2.5
COL6A5A8TX70 AC010332.2-201ENST00000613083 1904 ntBASIC-0.56□□□□□ -2.5
COL6A5A8TX70 RNU6-697P-201ENST00000363348 107 ntBASIC-0.56□□□□□ -2.5
COL6A5A8TX70 RNU6-730P-201ENST00000383954 104 ntBASIC-0.56□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms