Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 AL356274.2-201ENST00000624379 3752 ntBASIC2.73□□□□□ -1.97
CGB1A6NKQ9 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.73□□□□□ -1.97
CGB1A6NKQ9 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
CGB1A6NKQ9 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.72□□□□□ -1.97
CGB1A6NKQ9 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
CGB1A6NKQ9 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.72□□□□□ -1.97
CGB1A6NKQ9 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
CGB1A6NKQ9 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
CGB1A6NKQ9 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
CGB1A6NKQ9 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
CGB1A6NKQ9 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
CGB1A6NKQ9 RNU6-873P-201ENST00000363833 107 ntBASIC2.72□□□□□ -1.97
CGB1A6NKQ9 Y_RNA.217-201ENST00000364214 105 ntBASIC2.72□□□□□ -1.97
CGB1A6NKQ9 RNU6-81P-201ENST00000365608 104 ntBASIC2.72□□□□□ -1.97
CGB1A6NKQ9 SNORA5A-201ENST00000384111 134 ntBASIC2.72□□□□□ -1.97
CGB1A6NKQ9 SNORA36A-201ENST00000384221 132 ntBASIC2.72□□□□□ -1.97
CGB1A6NKQ9 RNU6-19P-201ENST00000384718 107 ntBASIC2.72□□□□□ -1.97
CGB1A6NKQ9 U3.26-201ENST00000391236 204 ntBASIC2.72□□□□□ -1.97
CGB1A6NKQ9 MIR1193-201ENST00000408109 78 ntBASIC2.72□□□□□ -1.97
CGB1A6NKQ9 RPS26P42-201ENST00000413485 326 ntBASIC2.72□□□□□ -1.97
CGB1A6NKQ9 PTGES3P4-201ENST00000426243 356 ntBASIC2.72□□□□□ -1.97
CGB1A6NKQ9 AL353705.1-201ENST00000433468 480 ntBASIC2.72□□□□□ -1.97
CGB1A6NKQ9 AC112220.1-201ENST00000434628 355 ntBASIC2.72□□□□□ -1.97
CGB1A6NKQ9 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.72□□□□□ -1.97
CGB1A6NKQ9 SNORD105B-201ENST00000458770 79 ntBASIC2.72□□□□□ -1.97
CGB1A6NKQ9 Y_RNA.641-201ENST00000459414 105 ntBASIC2.72□□□□□ -1.97
CGB1A6NKQ9 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC2.72□□□□□ -1.97
CGB1A6NKQ9 CENPBD1P1-201ENST00000464061 469 ntBASIC2.72□□□□□ -1.97
CGB1A6NKQ9 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.72□□□□□ -1.97
CGB1A6NKQ9 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.72□□□□□ -1.97
CGB1A6NKQ9 AC074133.1-201ENST00000515696 183 ntBASIC2.72□□□□□ -1.97
CGB1A6NKQ9 RNU5F-8P-201ENST00000515941 111 ntBASIC2.72□□□□□ -1.97
CGB1A6NKQ9 RN7SKP18-201ENST00000516005 275 ntBASIC2.72□□□□□ -1.97
CGB1A6NKQ9 RNY3P16-201ENST00000516338 101 ntBASIC2.72□□□□□ -1.97
CGB1A6NKQ9 RNU1-95P-201ENST00000516357 160 ntBASIC2.72□□□□□ -1.97
CGB1A6NKQ9 RNU1-128P-201ENST00000516704 160 ntBASIC2.72□□□□□ -1.97
CGB1A6NKQ9 SNORA31.23-201ENST00000517219 133 ntBASIC2.72□□□□□ -1.97
CGB1A6NKQ9 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.72□□□□□ -1.97
CGB1A6NKQ9 AC233702.2-202ENST00000562547 291 ntBASIC2.72□□□□□ -1.97
CGB1A6NKQ9 AC009163.5-201ENST00000575421 637 ntBASIC2.72□□□□□ -1.97
CGB1A6NKQ9 MIR4308-201ENST00000580634 81 ntBASIC2.72□□□□□ -1.97
CGB1A6NKQ9 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.72□□□□□ -1.97
CGB1A6NKQ9 AL359198.2-201ENST00000611836 194 ntBASIC2.72□□□□□ -1.97
CGB1A6NKQ9 uc_338.14-201ENST00000613162 166 ntBASIC2.72□□□□□ -1.97
CGB1A6NKQ9 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.72□□□□□ -1.97
CGB1A6NKQ9 ZNF204P-201ENST00000416749 2397 ntBASIC2.72□□□□□ -1.97
CGB1A6NKQ9 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.97
CGB1A6NKQ9 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
CGB1A6NKQ9 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC2.71□□□□□ -1.98
CGB1A6NKQ9 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.71□□□□□ -1.98
CGB1A6NKQ9 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
CGB1A6NKQ9 Y_RNA.398-201ENST00000383952 99 ntBASIC2.71□□□□□ -1.98
CGB1A6NKQ9 RNU6-1083P-201ENST00000384022 107 ntBASIC2.71□□□□□ -1.98
CGB1A6NKQ9 RNU6-748P-201ENST00000384648 107 ntBASIC2.71□□□□□ -1.98
CGB1A6NKQ9 SNORA40.19-201ENST00000390846 128 ntBASIC2.71□□□□□ -1.98
CGB1A6NKQ9 RNU6-1135P-201ENST00000411083 103 ntBASIC2.71□□□□□ -1.98
CGB1A6NKQ9 AC012306.1-201ENST00000423267 114 ntBASIC2.71□□□□□ -1.98
CGB1A6NKQ9 AC024067.1-201ENST00000426199 223 ntBASIC2.71□□□□□ -1.98
CGB1A6NKQ9 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.71□□□□□ -1.98
CGB1A6NKQ9 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.71□□□□□ -1.98
CGB1A6NKQ9 RBMY2UP-201ENST00000453474 324 ntBASIC2.71□□□□□ -1.98
CGB1A6NKQ9 AL441985.1-201ENST00000457727 251 ntBASIC2.71□□□□□ -1.98
CGB1A6NKQ9 snoU13.6-201ENST00000458785 104 ntBASIC2.71□□□□□ -1.98
CGB1A6NKQ9 AC107626.1-201ENST00000471084 183 ntBASIC2.71□□□□□ -1.98
CGB1A6NKQ9 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
CGB1A6NKQ9 RNU6-1219P-201ENST00000516143 112 ntBASIC2.71□□□□□ -1.98
CGB1A6NKQ9 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.71□□□□□ -1.98
CGB1A6NKQ9 AC074050.1-201ENST00000563247 211 ntBASIC2.71□□□□□ -1.98
CGB1A6NKQ9 AC106785.1-201ENST00000565935 262 ntBASIC2.71□□□□□ -1.98
CGB1A6NKQ9 IGKV1OR2-6-201ENST00000603485 277 ntBASIC2.71□□□□□ -1.98
CGB1A6NKQ9 AC005828.6-201ENST00000606610 232 ntBASIC2.71□□□□□ -1.98
CGB1A6NKQ9 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC2.71□□□□□ -1.98
CGB1A6NKQ9 AL357075.2-201ENST00000614906 189 ntBASIC2.71□□□□□ -1.98
CGB1A6NKQ9 AC009093.8-201ENST00000641769 292 ntBASIC2.71□□□□□ -1.98
CGB1A6NKQ9 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.71□□□□□ -1.98
CGB1A6NKQ9 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
CGB1A6NKQ9 AC010329.5-201ENST00000623497 2174 ntBASIC2.71□□□□□ -1.98
CGB1A6NKQ9 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
CGB1A6NKQ9 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
CGB1A6NKQ9 AL049781.1-201ENST00000623195 3585 ntBASIC2.7□□□□□ -1.98
CGB1A6NKQ9 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CGB1A6NKQ9 SNORD17-201ENST00000390930 237 ntBASIC2.7□□□□□ -1.98
CGB1A6NKQ9 SNORA26.3-201ENST00000391119 136 ntBASIC2.7□□□□□ -1.98
CGB1A6NKQ9 RNA5SP390-201ENST00000410191 113 ntBASIC2.7□□□□□ -1.98
CGB1A6NKQ9 AC138623.1-201ENST00000418060 216 ntBASIC2.7□□□□□ -1.98
CGB1A6NKQ9 OOSP1P1-201ENST00000423265 274 ntBASIC2.7□□□□□ -1.98
CGB1A6NKQ9 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.7□□□□□ -1.98
CGB1A6NKQ9 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.7□□□□□ -1.98
CGB1A6NKQ9 AC009237.7-201ENST00000447357 229 ntBASIC2.7□□□□□ -1.98
CGB1A6NKQ9 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC2.7□□□□□ -1.98
CGB1A6NKQ9 AP000705.1-201ENST00000454567 350 ntBASIC2.7□□□□□ -1.98
CGB1A6NKQ9 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.7□□□□□ -1.98
CGB1A6NKQ9 RNU6-625P-201ENST00000459412 107 ntBASIC2.7□□□□□ -1.98
CGB1A6NKQ9 AC025518.1-201ENST00000479856 347 ntBASIC2.7□□□□□ -1.98
CGB1A6NKQ9 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC2.7□□□□□ -1.98
CGB1A6NKQ9 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC2.7□□□□□ -1.98
CGB1A6NKQ9 RN7SKP282-201ENST00000516824 299 ntBASIC2.7□□□□□ -1.98
CGB1A6NKQ9 AC107934.2-201ENST00000518653 310 ntBASIC2.7□□□□□ -1.98
CGB1A6NKQ9 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.7□□□□□ -1.98
CGB1A6NKQ9 MIR5692C2-201ENST00000577959 77 ntBASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 134 ms