Protein–RNA interactions for Protein: A6NJ46

NKX6-3, Homeobox protein Nkx-6.3, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-3A6NJ46 RNU6-507P-201ENST00000516045 100 ntBASIC1.92□□□□□ -2.1
NKX6-3A6NJ46 Y_RNA.670-201ENST00000516255 105 ntBASIC1.92□□□□□ -2.1
NKX6-3A6NJ46 RNA5SP281-201ENST00000516504 135 ntBASIC1.92□□□□□ -2.1
NKX6-3A6NJ46 RNU6-1016P-201ENST00000516689 94 ntBASIC1.92□□□□□ -2.1
NKX6-3A6NJ46 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.92□□□□□ -2.1
NKX6-3A6NJ46 AL121579.1-201ENST00000555129 305 ntBASIC1.92□□□□□ -2.1
NKX6-3A6NJ46 MIR548S-201ENST00000581352 82 ntBASIC1.92□□□□□ -2.1
NKX6-3A6NJ46 MIR4448-201ENST00000584360 86 ntBASIC1.92□□□□□ -2.1
NKX6-3A6NJ46 AC010928.2-201ENST00000588017 287 ntBASIC1.92□□□□□ -2.1
NKX6-3A6NJ46 AC016727.2-201ENST00000603988 621 ntBASIC1.92□□□□□ -2.1
NKX6-3A6NJ46 AC018462.2-201ENST00000605375 395 ntBASIC1.92□□□□□ -2.1
NKX6-3A6NJ46 AP000654.2-201ENST00000605633 586 ntBASIC1.92□□□□□ -2.1
NKX6-3A6NJ46 AC009229.3-201ENST00000608056 282 ntBASIC1.92□□□□□ -2.1
NKX6-3A6NJ46 AC046143.2-201ENST00000609789 160 ntBASIC1.92□□□□□ -2.1
NKX6-3A6NJ46 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.92□□□□□ -2.1
NKX6-3A6NJ46 MIR6766-201ENST00000622641 72 ntBASIC1.92□□□□□ -2.1
NKX6-3A6NJ46 MIR6873-201ENST00000622788 63 ntBASIC1.92□□□□□ -2.1
NKX6-3A6NJ46 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.92□□□□□ -2.1
NKX6-3A6NJ46 AL359851.1-201ENST00000569460 4997 ntBASIC1.91□□□□□ -2.1
NKX6-3A6NJ46 RNU6-1159P-201ENST00000362933 107 ntBASIC1.91□□□□□ -2.1
NKX6-3A6NJ46 RNU6-234P-201ENST00000365229 104 ntBASIC1.91□□□□□ -2.1
NKX6-3A6NJ46 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
NKX6-3A6NJ46 MIR1262-201ENST00000408276 93 ntBASIC1.91□□□□□ -2.1
NKX6-3A6NJ46 RNU4-53P-201ENST00000410828 140 ntBASIC1.91□□□□□ -2.1
NKX6-3A6NJ46 AL135786.1-201ENST00000415892 214 ntBASIC1.91□□□□□ -2.1
NKX6-3A6NJ46 AL358453.1-201ENST00000422522 250 ntBASIC1.91□□□□□ -2.1
NKX6-3A6NJ46 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.91□□□□□ -2.1
NKX6-3A6NJ46 AL137159.1-201ENST00000452808 512 ntBASIC1.91□□□□□ -2.1
NKX6-3A6NJ46 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.91□□□□□ -2.1
NKX6-3A6NJ46 AC008549.1-201ENST00000512900 643 ntBASIC1.91□□□□□ -2.1
NKX6-3A6NJ46 RNU5F-4P-201ENST00000516581 114 ntBASIC1.91□□□□□ -2.1
NKX6-3A6NJ46 RNU6-1098P-201ENST00000516772 96 ntBASIC1.91□□□□□ -2.1
NKX6-3A6NJ46 RNA5SP490-201ENST00000517141 136 ntBASIC1.91□□□□□ -2.1
NKX6-3A6NJ46 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.91□□□□□ -2.1
NKX6-3A6NJ46 CBX3P8-201ENST00000532412 525 ntBASIC1.91□□□□□ -2.1
NKX6-3A6NJ46 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.91□□□□□ -2.1
NKX6-3A6NJ46 AC018630.3-201ENST00000542637 96 ntBASIC1.91□□□□□ -2.1
NKX6-3A6NJ46 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.91□□□□□ -2.1
NKX6-3A6NJ46 ANP32BP3-201ENST00000559213 706 ntBASIC1.91□□□□□ -2.1
NKX6-3A6NJ46 AC011494.1-201ENST00000596454 237 ntBASIC1.91□□□□□ -2.1
NKX6-3A6NJ46 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.91□□□□□ -2.1
NKX6-3A6NJ46 AL359757.2-201ENST00000624309 274 ntBASIC1.91□□□□□ -2.1
NKX6-3A6NJ46 AP000553.5-201ENST00000641933 54 ntBASIC1.91□□□□□ -2.1
NKX6-3A6NJ46 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.91□□□□□ -2.1
NKX6-3A6NJ46 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.9□□□□□ -2.1
NKX6-3A6NJ46 Y_RNA.142-201ENST00000363491 102 ntBASIC1.9□□□□□ -2.11
NKX6-3A6NJ46 SNORA16B-201ENST00000364674 135 ntBASIC1.9□□□□□ -2.11
NKX6-3A6NJ46 RNU6-611P-201ENST00000384276 104 ntBASIC1.9□□□□□ -2.11
NKX6-3A6NJ46 RNU6-331P-201ENST00000384724 107 ntBASIC1.9□□□□□ -2.11
NKX6-3A6NJ46 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.9□□□□□ -2.11
NKX6-3A6NJ46 EIF4EP2-201ENST00000422816 654 ntBASIC1.9□□□□□ -2.11
NKX6-3A6NJ46 MTCO3P29-201ENST00000432119 779 ntBASIC1.9□□□□□ -2.11
NKX6-3A6NJ46 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.9□□□□□ -2.11
NKX6-3A6NJ46 AL353997.1-201ENST00000432936 108 ntBASIC1.9□□□□□ -2.11
NKX6-3A6NJ46 HMGN2P18-201ENST00000450680 270 ntBASIC1.9□□□□□ -2.11
NKX6-3A6NJ46 RNA5SP233-201ENST00000459153 113 ntBASIC1.9□□□□□ -2.11
NKX6-3A6NJ46 TOMM22P6-201ENST00000465035 409 ntBASIC1.9□□□□□ -2.11
NKX6-3A6NJ46 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.9□□□□□ -2.11
NKX6-3A6NJ46 AC093259.1-201ENST00000509755 300 ntBASIC1.9□□□□□ -2.11
NKX6-3A6NJ46 ATP5EP1-201ENST00000510257 156 ntBASIC1.9□□□□□ -2.11
NKX6-3A6NJ46 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.9□□□□□ -2.11
NKX6-3A6NJ46 DEFB131C-201ENST00000528817 165 ntBASIC1.9□□□□□ -2.11
NKX6-3A6NJ46 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.9□□□□□ -2.11
NKX6-3A6NJ46 NDUFA5P6-201ENST00000542110 379 ntBASIC1.9□□□□□ -2.11
NKX6-3A6NJ46 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.9□□□□□ -2.11
NKX6-3A6NJ46 AC026271.5-201ENST00000577873 130 ntBASIC1.9□□□□□ -2.11
NKX6-3A6NJ46 AC016727.1-205ENST00000605437 569 ntBASIC1.9□□□□□ -2.11
NKX6-3A6NJ46 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.9□□□□□ -2.11
NKX6-3A6NJ46 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.9□□□□□ -2.11
NKX6-3A6NJ46 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.9□□□□□ -2.11
NKX6-3A6NJ46 WT1-AS_8.1-201ENST00000615200 275 ntBASIC1.9□□□□□ -2.11
NKX6-3A6NJ46 PISRT1.1-201ENST00000616930 107 ntBASIC1.9□□□□□ -2.11
NKX6-3A6NJ46 AL162373.1-201ENST00000620433 407 ntBASIC1.9□□□□□ -2.11
NKX6-3A6NJ46 AC064859.1-201ENST00000624741 174 ntBASIC1.9□□□□□ -2.11
NKX6-3A6NJ46 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.9□□□□□ -2.11
NKX6-3A6NJ46 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.89□□□□□ -2.11
NKX6-3A6NJ46 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
NKX6-3A6NJ46 Y_RNA.166-201ENST00000363730 102 ntBASIC1.89□□□□□ -2.11
NKX6-3A6NJ46 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.89□□□□□ -2.11
NKX6-3A6NJ46 RPL23AP50-201ENST00000434149 455 ntBASIC1.89□□□□□ -2.11
NKX6-3A6NJ46 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.89□□□□□ -2.11
NKX6-3A6NJ46 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.89□□□□□ -2.11
NKX6-3A6NJ46 SNRPEP8-201ENST00000442866 260 ntBASIC1.89□□□□□ -2.11
NKX6-3A6NJ46 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.89□□□□□ -2.11
NKX6-3A6NJ46 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.89□□□□□ -2.11
NKX6-3A6NJ46 SNORD5.1-201ENST00000458800 75 ntBASIC1.89□□□□□ -2.11
NKX6-3A6NJ46 RNU7-14P-201ENST00000459331 62 ntBASIC1.89□□□□□ -2.11
NKX6-3A6NJ46 AC091951.2-201ENST00000500762 203 ntBASIC1.89□□□□□ -2.11
NKX6-3A6NJ46 AC008413.1-201ENST00000511864 177 ntBASIC1.89□□□□□ -2.11
NKX6-3A6NJ46 RNU1-41P-201ENST00000516161 162 ntBASIC1.89□□□□□ -2.11
NKX6-3A6NJ46 RNU1-48P-201ENST00000516400 162 ntBASIC1.89□□□□□ -2.11
NKX6-3A6NJ46 RNA5SP384-201ENST00000516615 116 ntBASIC1.89□□□□□ -2.11
NKX6-3A6NJ46 Y_RNA.708-201ENST00000516950 96 ntBASIC1.89□□□□□ -2.11
NKX6-3A6NJ46 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.89□□□□□ -2.11
NKX6-3A6NJ46 AC105029.1-201ENST00000520250 669 ntBASIC1.89□□□□□ -2.11
NKX6-3A6NJ46 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.89□□□□□ -2.11
NKX6-3A6NJ46 AC016256.1-201ENST00000547971 354 ntBASIC1.89□□□□□ -2.11
NKX6-3A6NJ46 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.89□□□□□ -2.11
NKX6-3A6NJ46 UBE2V2P2-201ENST00000587677 504 ntBASIC1.89□□□□□ -2.11
NKX6-3A6NJ46 SNRPGP17-201ENST00000603780 214 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 179.8 ms