Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 DEFB131C-201ENST00000528817 165 ntBASIC0.88□□□□□ -2.27
RBFOX3A6NFN3 AL442163.3-201ENST00000554110 156 ntBASIC0.88□□□□□ -2.27
RBFOX3A6NFN3 HSPE1P19-201ENST00000603327 295 ntBASIC0.88□□□□□ -2.27
RBFOX3A6NFN3 AC245014.2-201ENST00000603689 287 ntBASIC0.88□□□□□ -2.27
RBFOX3A6NFN3 AC246785.4-201ENST00000605374 287 ntBASIC0.88□□□□□ -2.27
RBFOX3A6NFN3 AC040896.1-201ENST00000613819 479 ntBASIC0.88□□□□□ -2.27
RBFOX3A6NFN3 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC0.88□□□□□ -2.27
RBFOX3A6NFN3 AC099654.5-201ENST00000636479 350 ntBASIC0.88□□□□□ -2.27
RBFOX3A6NFN3 RNU6-1123P-201ENST00000362347 106 ntBASIC0.87□□□□□ -2.27
RBFOX3A6NFN3 SNORA4.2-201ENST00000365313 147 ntBASIC0.87□□□□□ -2.27
RBFOX3A6NFN3 SNORA18.2-201ENST00000383865 132 ntBASIC0.87□□□□□ -2.27
RBFOX3A6NFN3 RNU6-418P-201ENST00000384035 107 ntBASIC0.87□□□□□ -2.27
RBFOX3A6NFN3 RNU6-1235P-201ENST00000384559 107 ntBASIC0.87□□□□□ -2.27
RBFOX3A6NFN3 MIR515-2-201ENST00000384883 83 ntBASIC0.87□□□□□ -2.27
RBFOX3A6NFN3 MIR515-1-201ENST00000384884 83 ntBASIC0.87□□□□□ -2.27
RBFOX3A6NFN3 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.87□□□□□ -2.27
RBFOX3A6NFN3 SNORA40.3-201ENST00000390964 122 ntBASIC0.87□□□□□ -2.27
RBFOX3A6NFN3 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC0.87□□□□□ -2.27
RBFOX3A6NFN3 MTCO2P34-201ENST00000421994 607 ntBASIC0.87□□□□□ -2.27
RBFOX3A6NFN3 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.87□□□□□ -2.27
RBFOX3A6NFN3 PGBD4P5-201ENST00000445958 426 ntBASIC0.87□□□□□ -2.27
RBFOX3A6NFN3 AC132479.1-201ENST00000449160 144 ntBASIC0.87□□□□□ -2.27
RBFOX3A6NFN3 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.87□□□□□ -2.27
RBFOX3A6NFN3 C1DP4-201ENST00000455429 424 ntBASIC0.87□□□□□ -2.27
RBFOX3A6NFN3 RNU6-498P-201ENST00000459468 107 ntBASIC0.87□□□□□ -2.27
RBFOX3A6NFN3 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.87□□□□□ -2.27
RBFOX3A6NFN3 RNU7-40P-201ENST00000516397 64 ntBASIC0.87□□□□□ -2.27
RBFOX3A6NFN3 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC0.87□□□□□ -2.27
RBFOX3A6NFN3 AC009094.1-201ENST00000564443 426 ntBASIC0.87□□□□□ -2.27
RBFOX3A6NFN3 MIR3664-201ENST00000579074 99 ntBASIC0.87□□□□□ -2.27
RBFOX3A6NFN3 MIR3660-201ENST00000584845 100 ntBASIC0.87□□□□□ -2.27
RBFOX3A6NFN3 AL359821.1-201ENST00000605519 182 ntBASIC0.87□□□□□ -2.27
RBFOX3A6NFN3 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.87□□□□□ -2.27
RBFOX3A6NFN3 AC022960.3-201ENST00000619794 441 ntBASIC0.87□□□□□ -2.27
RBFOX3A6NFN3 AC079248.2-201ENST00000623779 326 ntBASIC0.87□□□□□ -2.27
RBFOX3A6NFN3 AC091895.1-201ENST00000624494 256 ntBASIC0.87□□□□□ -2.27
RBFOX3A6NFN3 Y_RNA.164-201ENST00000363709 102 ntBASIC0.86□□□□□ -2.27
RBFOX3A6NFN3 RNU1-124P-201ENST00000363861 145 ntBASIC0.86□□□□□ -2.27
RBFOX3A6NFN3 SNORA29-201ENST00000384183 140 ntBASIC0.86□□□□□ -2.27
RBFOX3A6NFN3 RNU5A-2P-201ENST00000384337 116 ntBASIC0.86□□□□□ -2.27
RBFOX3A6NFN3 RNU6-1093P-201ENST00000391194 107 ntBASIC0.86□□□□□ -2.27
RBFOX3A6NFN3 RNU2-29P-201ENST00000410423 189 ntBASIC0.86□□□□□ -2.27
RBFOX3A6NFN3 AC090960.1-201ENST00000421072 306 ntBASIC0.86□□□□□ -2.27
RBFOX3A6NFN3 MTCO2P3-201ENST00000442543 421 ntBASIC0.86□□□□□ -2.27
RBFOX3A6NFN3 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC0.86□□□□□ -2.27
RBFOX3A6NFN3 RNU7-167P-201ENST00000459160 62 ntBASIC0.86□□□□□ -2.27
RBFOX3A6NFN3 AC114982.1-201ENST00000469402 321 ntBASIC0.86□□□□□ -2.27
RBFOX3A6NFN3 RPS26P45-201ENST00000471748 340 ntBASIC0.86□□□□□ -2.27
RBFOX3A6NFN3 AC091435.1-201ENST00000505442 584 ntBASIC0.86□□□□□ -2.27
RBFOX3A6NFN3 ARL2BPP4-201ENST00000506854 471 ntBASIC0.86□□□□□ -2.27
RBFOX3A6NFN3 RN7SKP88-201ENST00000516847 250 ntBASIC0.86□□□□□ -2.27
RBFOX3A6NFN3 CENPUP1-201ENST00000526649 1202 ntBASIC0.86□□□□□ -2.27
RBFOX3A6NFN3 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC0.86□□□□□ -2.27
RBFOX3A6NFN3 AC026470.2-201ENST00000561492 181 ntBASIC0.86□□□□□ -2.27
RBFOX3A6NFN3 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC0.86□□□□□ -2.27
RBFOX3A6NFN3 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC0.86□□□□□ -2.27
RBFOX3A6NFN3 MIR4742-201ENST00000581069 85 ntBASIC0.86□□□□□ -2.27
RBFOX3A6NFN3 MIR4753-201ENST00000585119 83 ntBASIC0.86□□□□□ -2.27
RBFOX3A6NFN3 MIR4295-201ENST00000585286 85 ntBASIC0.86□□□□□ -2.27
RBFOX3A6NFN3 Z84480.1-201ENST00000605131 311 ntBASIC0.86□□□□□ -2.27
RBFOX3A6NFN3 7SK.8-201ENST00000612110 250 ntBASIC0.86□□□□□ -2.27
RBFOX3A6NFN3 7SK.11-201ENST00000615477 250 ntBASIC0.86□□□□□ -2.27
RBFOX3A6NFN3 7SK.13-201ENST00000622040 250 ntBASIC0.86□□□□□ -2.27
RBFOX3A6NFN3 AC027335.2-201ENST00000624030 375 ntBASIC0.86□□□□□ -2.27
RBFOX3A6NFN3 MPP6-209ENST00000625307 126 ntTSL 5 BASIC0.86□□□□□ -2.27
RBFOX3A6NFN3 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.86□□□□□ -2.27
RBFOX3A6NFN3 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
RBFOX3A6NFN3 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
RBFOX3A6NFN3 AL391516.1-201ENST00000554380 2449 ntBASIC0.85□□□□□ -2.27
RBFOX3A6NFN3 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
RBFOX3A6NFN3 snoU2-30.2-201ENST00000362805 70 ntBASIC0.85□□□□□ -2.27
RBFOX3A6NFN3 RNU6-553P-201ENST00000364047 96 ntBASIC0.85□□□□□ -2.27
RBFOX3A6NFN3 RNU4-91P-201ENST00000364778 135 ntBASIC0.85□□□□□ -2.27
RBFOX3A6NFN3 RNU6-968P-201ENST00000384076 107 ntBASIC0.85□□□□□ -2.27
RBFOX3A6NFN3 Y_RNA.560-201ENST00000384689 102 ntBASIC0.85□□□□□ -2.27
RBFOX3A6NFN3 FGFR1OP2P1-201ENST00000395943 500 ntBASIC0.85□□□□□ -2.27
RBFOX3A6NFN3 RPS26P42-201ENST00000413485 326 ntBASIC0.85□□□□□ -2.27
RBFOX3A6NFN3 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.85□□□□□ -2.27
RBFOX3A6NFN3 CYCSP46-201ENST00000423569 204 ntBASIC0.85□□□□□ -2.27
RBFOX3A6NFN3 AC133104.1-201ENST00000429100 218 ntBASIC0.85□□□□□ -2.27
RBFOX3A6NFN3 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC0.85□□□□□ -2.27
RBFOX3A6NFN3 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.85□□□□□ -2.27
RBFOX3A6NFN3 DYNLT3P2-201ENST00000442517 295 ntBASIC0.85□□□□□ -2.27
RBFOX3A6NFN3 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC0.85□□□□□ -2.27
RBFOX3A6NFN3 SNORD42A-201ENST00000459584 64 ntBASIC0.85□□□□□ -2.27
RBFOX3A6NFN3 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC0.85□□□□□ -2.27
RBFOX3A6NFN3 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC0.85□□□□□ -2.27
RBFOX3A6NFN3 BNIP3P39-201ENST00000601077 554 ntBASIC0.85□□□□□ -2.27
RBFOX3A6NFN3 AC234772.3-201ENST00000602277 528 ntBASIC0.85□□□□□ -2.27
RBFOX3A6NFN3 AC073413.2-201ENST00000604332 360 ntBASIC0.85□□□□□ -2.27
RBFOX3A6NFN3 AC005562.2-201ENST00000618264 111 ntBASIC0.85□□□□□ -2.27
RBFOX3A6NFN3 AC009509.4-201ENST00000619202 509 ntBASIC0.85□□□□□ -2.27
RBFOX3A6NFN3 RNY1P10-201ENST00000363268 113 ntBASIC0.84□□□□□ -2.27
RBFOX3A6NFN3 RNU6-975P-201ENST00000384296 105 ntBASIC0.84□□□□□ -2.27
RBFOX3A6NFN3 SNORA25-201ENST00000384384 134 ntBASIC0.84□□□□□ -2.27
RBFOX3A6NFN3 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.84□□□□□ -2.27
RBFOX3A6NFN3 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.84□□□□□ -2.27
RBFOX3A6NFN3 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC0.84□□□□□ -2.27
RBFOX3A6NFN3 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC0.84□□□□□ -2.27
RBFOX3A6NFN3 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC0.84□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 154.2 ms