Protein–RNA interactions for Protein: A6NCS4

NKX2-6, Homeobox protein Nkx-2.6, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-6A6NCS4 SNORA16.1-201ENST00000364597 132 ntBASIC1.54□□□□□ -2.16
NKX2-6A6NCS4 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.54□□□□□ -2.16
NKX2-6A6NCS4 RNU6-546P-201ENST00000383991 107 ntBASIC1.54□□□□□ -2.16
NKX2-6A6NCS4 Y_RNA.414-201ENST00000384011 101 ntBASIC1.54□□□□□ -2.16
NKX2-6A6NCS4 Y_RNA.505-201ENST00000384489 102 ntBASIC1.54□□□□□ -2.16
NKX2-6A6NCS4 RNU6-95P-201ENST00000384697 107 ntBASIC1.54□□□□□ -2.16
NKX2-6A6NCS4 MIR549A-201ENST00000385268 96 ntBASIC1.54□□□□□ -2.16
NKX2-6A6NCS4 RNU6-1106P-201ENST00000390845 107 ntBASIC1.54□□□□□ -2.16
NKX2-6A6NCS4 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC1.54□□□□□ -2.16
NKX2-6A6NCS4 MIR1277-201ENST00000408536 78 ntBASIC1.54□□□□□ -2.16
NKX2-6A6NCS4 EDDM3CP-201ENST00000415977 425 ntBASIC1.54□□□□□ -2.16
NKX2-6A6NCS4 RPL30P16-201ENST00000419341 429 ntBASIC1.54□□□□□ -2.16
NKX2-6A6NCS4 RPL23AP95-201ENST00000426806 265 ntBASIC1.54□□□□□ -2.16
NKX2-6A6NCS4 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.54□□□□□ -2.16
NKX2-6A6NCS4 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.54□□□□□ -2.16
NKX2-6A6NCS4 PPP1R2P5-201ENST00000457256 603 ntBASIC1.54□□□□□ -2.16
NKX2-6A6NCS4 TRMT112P2-201ENST00000512910 132 ntBASIC1.54□□□□□ -2.16
NKX2-6A6NCS4 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.54□□□□□ -2.16
NKX2-6A6NCS4 SCOCP1-201ENST00000554676 349 ntBASIC1.54□□□□□ -2.16
NKX2-6A6NCS4 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.54□□□□□ -2.16
NKX2-6A6NCS4 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.54□□□□□ -2.16
NKX2-6A6NCS4 VN1R107P-201ENST00000601784 209 ntBASIC1.54□□□□□ -2.16
NKX2-6A6NCS4 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.54□□□□□ -2.16
NKX2-6A6NCS4 AL138726.1-201ENST00000614873 333 ntBASIC1.54□□□□□ -2.16
NKX2-6A6NCS4 AC002553.4-201ENST00000616896 331 ntBASIC1.54□□□□□ -2.16
NKX2-6A6NCS4 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.54□□□□□ -2.16
NKX2-6A6NCS4 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.54□□□□□ -2.16
NKX2-6A6NCS4 AL136221.1-201ENST00000621449 509 ntBASIC1.54□□□□□ -2.16
NKX2-6A6NCS4 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.54□□□□□ -2.16
NKX2-6A6NCS4 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
NKX2-6A6NCS4 AC009487.4-201ENST00000624969 3585 ntBASIC1.54□□□□□ -2.16
NKX2-6A6NCS4 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
NKX2-6A6NCS4 RNU6-227P-201ENST00000362865 103 ntBASIC1.53□□□□□ -2.16
NKX2-6A6NCS4 Y_RNA.212-201ENST00000364177 102 ntBASIC1.53□□□□□ -2.16
NKX2-6A6NCS4 RNU6-378P-201ENST00000384324 107 ntBASIC1.53□□□□□ -2.16
NKX2-6A6NCS4 Y_RNA.530-201ENST00000384587 101 ntBASIC1.53□□□□□ -2.16
NKX2-6A6NCS4 BTF3L4P2-201ENST00000392798 346 ntBASIC1.53□□□□□ -2.16
NKX2-6A6NCS4 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.53□□□□□ -2.16
NKX2-6A6NCS4 AP000275.1-201ENST00000411943 390 ntBASIC1.53□□□□□ -2.16
NKX2-6A6NCS4 AL133396.1-201ENST00000432048 687 ntBASIC1.53□□□□□ -2.16
NKX2-6A6NCS4 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.53□□□□□ -2.16
NKX2-6A6NCS4 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.53□□□□□ -2.16
NKX2-6A6NCS4 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.53□□□□□ -2.16
NKX2-6A6NCS4 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.53□□□□□ -2.16
NKX2-6A6NCS4 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.53□□□□□ -2.16
NKX2-6A6NCS4 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC1.53□□□□□ -2.16
NKX2-6A6NCS4 AC021146.2-201ENST00000504736 556 ntBASIC1.53□□□□□ -2.16
NKX2-6A6NCS4 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.53□□□□□ -2.16
NKX2-6A6NCS4 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.53□□□□□ -2.16
NKX2-6A6NCS4 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
NKX2-6A6NCS4 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.53□□□□□ -2.16
NKX2-6A6NCS4 RNU4-49P-201ENST00000516080 140 ntBASIC1.53□□□□□ -2.16
NKX2-6A6NCS4 AC034114.1-201ENST00000520293 285 ntBASIC1.53□□□□□ -2.16
NKX2-6A6NCS4 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.53□□□□□ -2.16
NKX2-6A6NCS4 AC115990.1-201ENST00000526957 301 ntBASIC1.53□□□□□ -2.16
NKX2-6A6NCS4 AC118273.2-201ENST00000532092 465 ntBASIC1.53□□□□□ -2.16
NKX2-6A6NCS4 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.53□□□□□ -2.16
NKX2-6A6NCS4 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.53□□□□□ -2.16
NKX2-6A6NCS4 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.53□□□□□ -2.16
NKX2-6A6NCS4 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.53□□□□□ -2.16
NKX2-6A6NCS4 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.53□□□□□ -2.16
NKX2-6A6NCS4 AC109446.1-201ENST00000566172 220 ntBASIC1.53□□□□□ -2.16
NKX2-6A6NCS4 MIR3126-201ENST00000577443 74 ntBASIC1.53□□□□□ -2.16
NKX2-6A6NCS4 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.53□□□□□ -2.16
NKX2-6A6NCS4 AC005034.5-201ENST00000604219 466 ntBASIC1.53□□□□□ -2.16
NKX2-6A6NCS4 AL359821.1-201ENST00000605519 182 ntBASIC1.53□□□□□ -2.16
NKX2-6A6NCS4 U4atac.1-201ENST00000618345 95 ntBASIC1.53□□□□□ -2.16
NKX2-6A6NCS4 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
NKX2-6A6NCS4 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
NKX2-6A6NCS4 RNU6-790P-201ENST00000384479 105 ntBASIC1.52□□□□□ -2.17
NKX2-6A6NCS4 RNU6-306P-201ENST00000384617 107 ntBASIC1.52□□□□□ -2.17
NKX2-6A6NCS4 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
NKX2-6A6NCS4 MIR1262-201ENST00000408276 93 ntBASIC1.52□□□□□ -2.17
NKX2-6A6NCS4 RN7SKP61-201ENST00000410642 295 ntBASIC1.52□□□□□ -2.17
NKX2-6A6NCS4 RNU6-373P-201ENST00000411247 98 ntBASIC1.52□□□□□ -2.17
NKX2-6A6NCS4 RPS20P15-201ENST00000412792 311 ntBASIC1.52□□□□□ -2.17
NKX2-6A6NCS4 AL358453.1-201ENST00000422522 250 ntBASIC1.52□□□□□ -2.17
NKX2-6A6NCS4 UBE2V1P4-201ENST00000425374 344 ntBASIC1.52□□□□□ -2.17
NKX2-6A6NCS4 AC078809.1-201ENST00000427601 140 ntBASIC1.52□□□□□ -2.17
NKX2-6A6NCS4 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.52□□□□□ -2.17
NKX2-6A6NCS4 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.52□□□□□ -2.17
NKX2-6A6NCS4 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.52□□□□□ -2.17
NKX2-6A6NCS4 AC107032.1-201ENST00000485945 480 ntBASIC1.52□□□□□ -2.17
NKX2-6A6NCS4 AC096745.1-201ENST00000509945 370 ntBASIC1.52□□□□□ -2.17
NKX2-6A6NCS4 AC005741.1-201ENST00000511094 432 ntBASIC1.52□□□□□ -2.17
NKX2-6A6NCS4 PTP4A1P4-201ENST00000512479 322 ntBASIC1.52□□□□□ -2.17
NKX2-6A6NCS4 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.52□□□□□ -2.17
NKX2-6A6NCS4 AP003033.1-201ENST00000527244 415 ntBASIC1.52□□□□□ -2.17
NKX2-6A6NCS4 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.52□□□□□ -2.17
NKX2-6A6NCS4 MIR4419B-201ENST00000577260 68 ntBASIC1.52□□□□□ -2.17
NKX2-6A6NCS4 AC024614.2-201ENST00000577584 372 ntBASIC1.52□□□□□ -2.17
NKX2-6A6NCS4 MIR4529-201ENST00000578110 78 ntBASIC1.52□□□□□ -2.17
NKX2-6A6NCS4 AC100830.2-201ENST00000581636 240 ntBASIC1.52□□□□□ -2.17
NKX2-6A6NCS4 AL031274.2-201ENST00000599419 203 ntBASIC1.52□□□□□ -2.17
NKX2-6A6NCS4 Z98751.3-201ENST00000604447 521 ntBASIC1.52□□□□□ -2.17
NKX2-6A6NCS4 AC018889.1-201ENST00000605372 397 ntBASIC1.52□□□□□ -2.17
NKX2-6A6NCS4 AL132822.1-201ENST00000617063 513 ntBASIC1.52□□□□□ -2.17
NKX2-6A6NCS4 MIR7111-201ENST00000619751 72 ntBASIC1.52□□□□□ -2.17
NKX2-6A6NCS4 AL133216.2-202ENST00000634512 349 ntBASIC1.52□□□□□ -2.17
NKX2-6A6NCS4 AC008555.8-201ENST00000623602 2168 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms