Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 DEFB131C-201ENST00000528817 165 ntBASIC1.65□□□□□ -2.15
SMIM28A0A1B0GU29 PCGEM1.1-201ENST00000613431 131 ntBASIC1.65□□□□□ -2.15
SMIM28A0A1B0GU29 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.65□□□□□ -2.15
SMIM28A0A1B0GU29 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.65□□□□□ -2.15
SMIM28A0A1B0GU29 AC009541.1-201ENST00000438279 2662 ntBASIC1.65□□□□□ -2.15
SMIM28A0A1B0GU29 RNU6-227P-201ENST00000362865 103 ntBASIC1.64□□□□□ -2.15
SMIM28A0A1B0GU29 Y_RNA.89-201ENST00000363031 102 ntBASIC1.64□□□□□ -2.15
SMIM28A0A1B0GU29 RNU4-13P-201ENST00000364019 141 ntBASIC1.64□□□□□ -2.15
SMIM28A0A1B0GU29 RNU6-534P-201ENST00000364877 106 ntBASIC1.64□□□□□ -2.15
SMIM28A0A1B0GU29 MIR450B-201ENST00000401182 78 ntBASIC1.64□□□□□ -2.15
SMIM28A0A1B0GU29 AL158823.1-201ENST00000418441 478 ntBASIC1.64□□□□□ -2.15
SMIM28A0A1B0GU29 AL513185.2-201ENST00000425543 193 ntBASIC1.64□□□□□ -2.15
SMIM28A0A1B0GU29 RNU7-95P-201ENST00000459222 64 ntBASIC1.64□□□□□ -2.15
SMIM28A0A1B0GU29 AC007547.1-201ENST00000462177 490 ntBASIC1.64□□□□□ -2.15
SMIM28A0A1B0GU29 RPL9P9-202ENST00000466501 579 ntBASIC1.64□□□□□ -2.15
SMIM28A0A1B0GU29 RPS29P25-201ENST00000481709 171 ntBASIC1.64□□□□□ -2.15
SMIM28A0A1B0GU29 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.64□□□□□ -2.15
SMIM28A0A1B0GU29 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.64□□□□□ -2.15
SMIM28A0A1B0GU29 FAM206BP-201ENST00000510179 541 ntBASIC1.64□□□□□ -2.15
SMIM28A0A1B0GU29 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.64□□□□□ -2.15
SMIM28A0A1B0GU29 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.64□□□□□ -2.15
SMIM28A0A1B0GU29 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.64□□□□□ -2.15
SMIM28A0A1B0GU29 DNAJC19P9-201ENST00000555084 351 ntBASIC1.64□□□□□ -2.15
SMIM28A0A1B0GU29 ZNF519P2-201ENST00000557032 169 ntBASIC1.64□□□□□ -2.15
SMIM28A0A1B0GU29 AC015720.1-201ENST00000565251 277 ntBASIC1.64□□□□□ -2.15
SMIM28A0A1B0GU29 MIR4498-201ENST00000577599 66 ntBASIC1.64□□□□□ -2.15
SMIM28A0A1B0GU29 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.64□□□□□ -2.15
SMIM28A0A1B0GU29 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.64□□□□□ -2.15
SMIM28A0A1B0GU29 AC243960.4-201ENST00000600532 288 ntBASIC1.64□□□□□ -2.15
SMIM28A0A1B0GU29 AL512598.1-201ENST00000610158 273 ntBASIC1.64□□□□□ -2.15
SMIM28A0A1B0GU29 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC1.64□□□□□ -2.15
SMIM28A0A1B0GU29 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
SMIM28A0A1B0GU29 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
SMIM28A0A1B0GU29 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
SMIM28A0A1B0GU29 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
SMIM28A0A1B0GU29 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.63□□□□□ -2.15
SMIM28A0A1B0GU29 RNU6-234P-201ENST00000365229 104 ntBASIC1.63□□□□□ -2.15
SMIM28A0A1B0GU29 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
SMIM28A0A1B0GU29 SNORD115-47-201ENST00000391226 86 ntBASIC1.63□□□□□ -2.15
SMIM28A0A1B0GU29 AL030996.1-201ENST00000411430 235 ntBASIC1.63□□□□□ -2.15
SMIM28A0A1B0GU29 SRIP3-201ENST00000413200 219 ntBASIC1.63□□□□□ -2.15
SMIM28A0A1B0GU29 SNRPEP10-201ENST00000420249 274 ntBASIC1.63□□□□□ -2.15
SMIM28A0A1B0GU29 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.63□□□□□ -2.15
SMIM28A0A1B0GU29 NDUFA5P4-201ENST00000436704 385 ntBASIC1.63□□□□□ -2.15
SMIM28A0A1B0GU29 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.63□□□□□ -2.15
SMIM28A0A1B0GU29 RPL23AP3-201ENST00000453844 468 ntBASIC1.63□□□□□ -2.15
SMIM28A0A1B0GU29 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.63□□□□□ -2.15
SMIM28A0A1B0GU29 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.63□□□□□ -2.15
SMIM28A0A1B0GU29 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.63□□□□□ -2.15
SMIM28A0A1B0GU29 MRPS36P4-201ENST00000534436 298 ntBASIC1.63□□□□□ -2.15
SMIM28A0A1B0GU29 AC021231.3-201ENST00000558497 370 ntBASIC1.63□□□□□ -2.15
SMIM28A0A1B0GU29 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.63□□□□□ -2.15
SMIM28A0A1B0GU29 CYP4A27P-201ENST00000567218 190 ntBASIC1.63□□□□□ -2.15
SMIM28A0A1B0GU29 MIR4299-201ENST00000577899 72 ntBASIC1.63□□□□□ -2.15
SMIM28A0A1B0GU29 CPDP1-201ENST00000579660 283 ntBASIC1.63□□□□□ -2.15
SMIM28A0A1B0GU29 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.63□□□□□ -2.15
SMIM28A0A1B0GU29 AC100830.2-201ENST00000581636 240 ntBASIC1.63□□□□□ -2.15
SMIM28A0A1B0GU29 AC023043.2-201ENST00000589678 1026 ntBASIC1.63□□□□□ -2.15
SMIM28A0A1B0GU29 AC146944.4-201ENST00000602697 718 ntBASIC1.63□□□□□ -2.15
SMIM28A0A1B0GU29 AC009994.1-201ENST00000606889 253 ntBASIC1.63□□□□□ -2.15
SMIM28A0A1B0GU29 AC098657.3-201ENST00000620434 263 ntBASIC1.63□□□□□ -2.15
SMIM28A0A1B0GU29 AC068137.4-201ENST00000638485 296 ntBASIC1.63□□□□□ -2.15
SMIM28A0A1B0GU29 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
SMIM28A0A1B0GU29 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.63□□□□□ -2.15
SMIM28A0A1B0GU29 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.62□□□□□ -2.15
SMIM28A0A1B0GU29 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.62□□□□□ -2.15
SMIM28A0A1B0GU29 MIR340-201ENST00000362125 95 ntBASIC1.62□□□□□ -2.15
SMIM28A0A1B0GU29 Y_RNA.9-201ENST00000362354 101 ntBASIC1.62□□□□□ -2.15
SMIM28A0A1B0GU29 Y_RNA.123-201ENST00000363338 102 ntBASIC1.62□□□□□ -2.15
SMIM28A0A1B0GU29 Y_RNA.338-201ENST00000365320 114 ntBASIC1.62□□□□□ -2.15
SMIM28A0A1B0GU29 RNU6-214P-201ENST00000384130 107 ntBASIC1.62□□□□□ -2.15
SMIM28A0A1B0GU29 RNU6-95P-201ENST00000384697 107 ntBASIC1.62□□□□□ -2.15
SMIM28A0A1B0GU29 MIR208B-201ENST00000401172 77 ntBASIC1.62□□□□□ -2.15
SMIM28A0A1B0GU29 AL356432.1-201ENST00000405809 419 ntBASIC1.62□□□□□ -2.15
SMIM28A0A1B0GU29 RNU6-174P-201ENST00000410406 106 ntBASIC1.62□□□□□ -2.15
SMIM28A0A1B0GU29 RNU2-40P-201ENST00000410833 196 ntBASIC1.62□□□□□ -2.15
SMIM28A0A1B0GU29 RNU2-41P-201ENST00000410991 178 ntBASIC1.62□□□□□ -2.15
SMIM28A0A1B0GU29 VN1R36P-201ENST00000414936 291 ntBASIC1.62□□□□□ -2.15
SMIM28A0A1B0GU29 UBE2V1P4-201ENST00000425374 344 ntBASIC1.62□□□□□ -2.15
SMIM28A0A1B0GU29 RPL23AP6-201ENST00000446637 472 ntBASIC1.62□□□□□ -2.15
SMIM28A0A1B0GU29 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.62□□□□□ -2.15
SMIM28A0A1B0GU29 AF186996.7-201ENST00000492781 209 ntBASIC1.62□□□□□ -2.15
SMIM28A0A1B0GU29 RNA5SP490-201ENST00000517141 136 ntBASIC1.62□□□□□ -2.15
SMIM28A0A1B0GU29 SNORA31.24-201ENST00000517232 57 ntBASIC1.62□□□□□ -2.15
SMIM28A0A1B0GU29 MTND1P5-201ENST00000517906 940 ntBASIC1.62□□□□□ -2.15
SMIM28A0A1B0GU29 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.62□□□□□ -2.15
SMIM28A0A1B0GU29 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.62□□□□□ -2.15
SMIM28A0A1B0GU29 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.62□□□□□ -2.15
SMIM28A0A1B0GU29 AC109446.1-201ENST00000566172 220 ntBASIC1.62□□□□□ -2.15
SMIM28A0A1B0GU29 MIR3923-201ENST00000579521 83 ntBASIC1.62□□□□□ -2.15
SMIM28A0A1B0GU29 MIR3942-201ENST00000585264 109 ntBASIC1.62□□□□□ -2.15
SMIM28A0A1B0GU29 AC016727.1-205ENST00000605437 569 ntBASIC1.62□□□□□ -2.15
SMIM28A0A1B0GU29 AP000654.2-201ENST00000605633 586 ntBASIC1.62□□□□□ -2.15
SMIM28A0A1B0GU29 MIR3976-201ENST00000606807 139 ntBASIC1.62□□□□□ -2.15
SMIM28A0A1B0GU29 snoU13.31-201ENST00000607291 104 ntBASIC1.62□□□□□ -2.15
SMIM28A0A1B0GU29 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
SMIM28A0A1B0GU29 AC005520.5-201ENST00000613926 164 ntBASIC1.62□□□□□ -2.15
SMIM28A0A1B0GU29 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.62□□□□□ -2.15
SMIM28A0A1B0GU29 AL138726.1-201ENST00000614873 333 ntBASIC1.62□□□□□ -2.15
SMIM28A0A1B0GU29 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 140.6 ms