Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 RNU6-461P-201ENST00000364195 107 ntBASIC3.31□□□□□ -1.88
CCDC163A0A0D9SF12 Y_RNA.276-201ENST00000364732 109 ntBASIC3.31□□□□□ -1.88
CCDC163A0A0D9SF12 RNU6-245P-201ENST00000384020 107 ntBASIC3.31□□□□□ -1.88
CCDC163A0A0D9SF12 Y_RNA.461-201ENST00000384263 103 ntBASIC3.31□□□□□ -1.88
CCDC163A0A0D9SF12 U6atac.2-201ENST00000408644 118 ntBASIC3.31□□□□□ -1.88
CCDC163A0A0D9SF12 ARL5AP4-201ENST00000430731 512 ntBASIC3.31□□□□□ -1.88
CCDC163A0A0D9SF12 BX679664.1-201ENST00000434429 253 ntBASIC3.31□□□□□ -1.88
CCDC163A0A0D9SF12 RN7SL863P-201ENST00000462370 296 ntBASIC3.31□□□□□ -1.88
CCDC163A0A0D9SF12 AC091179.3-201ENST00000474761 144 ntBASIC3.31□□□□□ -1.88
CCDC163A0A0D9SF12 RN7SL429P-201ENST00000479090 223 ntBASIC3.31□□□□□ -1.88
CCDC163A0A0D9SF12 RN7SL489P-201ENST00000486185 223 ntBASIC3.31□□□□□ -1.88
CCDC163A0A0D9SF12 RN7SL327P-201ENST00000488659 223 ntBASIC3.31□□□□□ -1.88
CCDC163A0A0D9SF12 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC3.31□□□□□ -1.88
CCDC163A0A0D9SF12 AC026470.2-201ENST00000561492 181 ntBASIC3.31□□□□□ -1.88
CCDC163A0A0D9SF12 MYL12BP1-201ENST00000569826 507 ntBASIC3.31□□□□□ -1.88
CCDC163A0A0D9SF12 MIR4672-201ENST00000583126 81 ntBASIC3.31□□□□□ -1.88
CCDC163A0A0D9SF12 MIR3616-201ENST00000584070 92 ntBASIC3.31□□□□□ -1.88
CCDC163A0A0D9SF12 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC163A0A0D9SF12 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.31□□□□□ -1.88
CCDC163A0A0D9SF12 AL357075.2-201ENST00000614906 189 ntBASIC3.31□□□□□ -1.88
CCDC163A0A0D9SF12 TCL6_2.1-201ENST00000615162 119 ntBASIC3.31□□□□□ -1.88
CCDC163A0A0D9SF12 AC010205.1-201ENST00000616668 449 ntBASIC3.31□□□□□ -1.88
CCDC163A0A0D9SF12 RN7SL853P-201ENST00000617250 223 ntBASIC3.31□□□□□ -1.88
CCDC163A0A0D9SF12 MIR8062-201ENST00000621515 85 ntBASIC3.31□□□□□ -1.88
CCDC163A0A0D9SF12 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC3.31□□□□□ -1.88
CCDC163A0A0D9SF12 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CCDC163A0A0D9SF12 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.31□□□□□ -1.88
CCDC163A0A0D9SF12 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
CCDC163A0A0D9SF12 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.31□□□□□ -1.88
CCDC163A0A0D9SF12 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CCDC163A0A0D9SF12 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.31□□□□□ -1.88
CCDC163A0A0D9SF12 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.31□□□□□ -1.88
CCDC163A0A0D9SF12 Y_RNA.193-201ENST00000363979 102 ntBASIC3.3□□□□□ -1.88
CCDC163A0A0D9SF12 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CCDC163A0A0D9SF12 DYNLT3P1-201ENST00000378574 347 ntBASIC3.3□□□□□ -1.88
CCDC163A0A0D9SF12 Y_RNA.396-201ENST00000383949 103 ntBASIC3.3□□□□□ -1.88
CCDC163A0A0D9SF12 Y_RNA.498-201ENST00000384460 102 ntBASIC3.3□□□□□ -1.88
CCDC163A0A0D9SF12 RNU6-1274P-201ENST00000384557 107 ntBASIC3.3□□□□□ -1.88
CCDC163A0A0D9SF12 Y_RNA.602-201ENST00000410535 92 ntBASIC3.3□□□□□ -1.88
CCDC163A0A0D9SF12 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.3□□□□□ -1.88
CCDC163A0A0D9SF12 RPL21P38-201ENST00000418090 167 ntBASIC3.3□□□□□ -1.88
CCDC163A0A0D9SF12 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC3.3□□□□□ -1.88
CCDC163A0A0D9SF12 AL357552.1-201ENST00000445254 415 ntBASIC3.3□□□□□ -1.88
CCDC163A0A0D9SF12 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.3□□□□□ -1.88
CCDC163A0A0D9SF12 SNORA40.9-201ENST00000515895 93 ntBASIC3.3□□□□□ -1.88
CCDC163A0A0D9SF12 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.3□□□□□ -1.88
CCDC163A0A0D9SF12 RNU5F-4P-201ENST00000516581 114 ntBASIC3.3□□□□□ -1.88
CCDC163A0A0D9SF12 AP006245.1-201ENST00000522549 120 ntBASIC3.3□□□□□ -1.88
CCDC163A0A0D9SF12 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC3.3□□□□□ -1.88
CCDC163A0A0D9SF12 AL713866.2-201ENST00000603579 219 ntBASIC3.3□□□□□ -1.88
CCDC163A0A0D9SF12 AC006023.1-201ENST00000603944 259 ntBASIC3.3□□□□□ -1.88
CCDC163A0A0D9SF12 MIR5739-201ENST00000619803 80 ntBASIC3.3□□□□□ -1.88
CCDC163A0A0D9SF12 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
CCDC163A0A0D9SF12 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.3□□□□□ -1.88
CCDC163A0A0D9SF12 AC068647.1-201ENST00000489539 2265 ntBASIC3.3□□□□□ -1.88
CCDC163A0A0D9SF12 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
CCDC163A0A0D9SF12 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC163A0A0D9SF12 RNU6-626P-201ENST00000363354 107 ntBASIC3.29□□□□□ -1.88
CCDC163A0A0D9SF12 RNU6-944P-201ENST00000364023 107 ntBASIC3.29□□□□□ -1.88
CCDC163A0A0D9SF12 MIR1294-201ENST00000408503 142 ntBASIC3.29□□□□□ -1.88
CCDC163A0A0D9SF12 RNU6-121P-201ENST00000410525 99 ntBASIC3.29□□□□□ -1.88
CCDC163A0A0D9SF12 AL139281.1-201ENST00000422120 335 ntBASIC3.29□□□□□ -1.88
CCDC163A0A0D9SF12 MICF-203ENST00000432679 129 ntBASIC3.29□□□□□ -1.88
CCDC163A0A0D9SF12 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.29□□□□□ -1.88
CCDC163A0A0D9SF12 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.29□□□□□ -1.88
CCDC163A0A0D9SF12 AC004817.2-201ENST00000561794 651 ntBASIC3.29□□□□□ -1.88
CCDC163A0A0D9SF12 AC136932.1-201ENST00000574771 208 ntBASIC3.29□□□□□ -1.88
CCDC163A0A0D9SF12 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC163A0A0D9SF12 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC163A0A0D9SF12 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.29□□□□□ -1.88
CCDC163A0A0D9SF12 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC163A0A0D9SF12 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CCDC163A0A0D9SF12 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
CCDC163A0A0D9SF12 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.28□□□□□ -1.88
CCDC163A0A0D9SF12 RNU1-72P-201ENST00000362976 153 ntBASIC3.28□□□□□ -1.88
CCDC163A0A0D9SF12 RNA5SP197-201ENST00000363357 119 ntBASIC3.28□□□□□ -1.88
CCDC163A0A0D9SF12 SNORA5B-201ENST00000363786 132 ntBASIC3.28□□□□□ -1.88
CCDC163A0A0D9SF12 RNU6-961P-201ENST00000363893 105 ntBASIC3.28□□□□□ -1.88
CCDC163A0A0D9SF12 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.28□□□□□ -1.88
CCDC163A0A0D9SF12 Y_RNA.376-201ENST00000365638 108 ntBASIC3.28□□□□□ -1.88
CCDC163A0A0D9SF12 Y_RNA.401-201ENST00000383965 117 ntBASIC3.28□□□□□ -1.88
CCDC163A0A0D9SF12 RNU6-20P-201ENST00000384106 107 ntBASIC3.28□□□□□ -1.88
CCDC163A0A0D9SF12 SNORA7.4-201ENST00000384249 137 ntBASIC3.28□□□□□ -1.88
CCDC163A0A0D9SF12 MRPL35P1-201ENST00000404272 572 ntBASIC3.28□□□□□ -1.88
CCDC163A0A0D9SF12 RNA5SP492-201ENST00000411330 114 ntBASIC3.28□□□□□ -1.88
CCDC163A0A0D9SF12 AC126124.2-201ENST00000413542 321 ntBASIC3.28□□□□□ -1.88
CCDC163A0A0D9SF12 AL445687.1-201ENST00000439946 251 ntBASIC3.28□□□□□ -1.88
CCDC163A0A0D9SF12 IFNA11P-201ENST00000446352 526 ntBASIC3.28□□□□□ -1.88
CCDC163A0A0D9SF12 RNU6-625P-201ENST00000459412 107 ntBASIC3.28□□□□□ -1.88
CCDC163A0A0D9SF12 RPL23AP67-201ENST00000465341 474 ntBASIC3.28□□□□□ -1.88
CCDC163A0A0D9SF12 RPS23P5-201ENST00000495419 428 ntBASIC3.28□□□□□ -1.88
CCDC163A0A0D9SF12 SNORA70.19-201ENST00000516717 90 ntBASIC3.28□□□□□ -1.88
CCDC163A0A0D9SF12 RNU6-965P-201ENST00000516721 96 ntBASIC3.28□□□□□ -1.88
CCDC163A0A0D9SF12 DEFB131C-201ENST00000528817 165 ntBASIC3.28□□□□□ -1.88
CCDC163A0A0D9SF12 MDM2-232ENST00000544561 213 ntTSL 5 BASIC3.28□□□□□ -1.88
CCDC163A0A0D9SF12 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC3.28□□□□□ -1.88
CCDC163A0A0D9SF12 AC090616.3-201ENST00000582184 217 ntBASIC3.28□□□□□ -1.88
CCDC163A0A0D9SF12 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.28□□□□□ -1.88
CCDC163A0A0D9SF12 AC006006.1-201ENST00000603082 144 ntBASIC3.28□□□□□ -1.88
CCDC163A0A0D9SF12 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms