Protein–RNA interactions for Protein: A0A0B4J274

TRAV20, T-cell receptor alpha variable 20 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV20A0A0B4J274 FAM35CP-201ENST00000554755 2470 ntBASIC3.2□□□□□ -1.9
TRAV20A0A0B4J274 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.19□□□□□ -1.9
TRAV20A0A0B4J274 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
TRAV20A0A0B4J274 RNU6-545P-201ENST00000362681 104 ntBASIC3.19□□□□□ -1.9
TRAV20A0A0B4J274 Y_RNA.136-201ENST00000363444 102 ntBASIC3.19□□□□□ -1.9
TRAV20A0A0B4J274 SNORD46.1-201ENST00000364139 104 ntBASIC3.19□□□□□ -1.9
TRAV20A0A0B4J274 RNU6-454P-201ENST00000364292 107 ntBASIC3.19□□□□□ -1.9
TRAV20A0A0B4J274 SNORA51.4-201ENST00000364993 124 ntBASIC3.19□□□□□ -1.9
TRAV20A0A0B4J274 DYNLT3P1-201ENST00000378574 347 ntBASIC3.19□□□□□ -1.9
TRAV20A0A0B4J274 Y_RNA.418-201ENST00000384029 102 ntBASIC3.19□□□□□ -1.9
TRAV20A0A0B4J274 MIR548B-201ENST00000385247 97 ntBASIC3.19□□□□□ -1.9
TRAV20A0A0B4J274 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
TRAV20A0A0B4J274 MTCO1P5-201ENST00000433573 344 ntBASIC3.19□□□□□ -1.9
TRAV20A0A0B4J274 AL161788.1-201ENST00000441805 169 ntBASIC3.19□□□□□ -1.9
TRAV20A0A0B4J274 CYCSP35-201ENST00000451978 304 ntBASIC3.19□□□□□ -1.9
TRAV20A0A0B4J274 NDUFB4P10-201ENST00000452541 359 ntBASIC3.19□□□□□ -1.9
TRAV20A0A0B4J274 snoU13.22-201ENST00000459428 104 ntBASIC3.19□□□□□ -1.9
TRAV20A0A0B4J274 RPL31P61-201ENST00000496160 376 ntBASIC3.19□□□□□ -1.9
TRAV20A0A0B4J274 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC3.19□□□□□ -1.9
TRAV20A0A0B4J274 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.19□□□□□ -1.9
TRAV20A0A0B4J274 RNU6-965P-201ENST00000516721 96 ntBASIC3.19□□□□□ -1.9
TRAV20A0A0B4J274 RNU2-12P-201ENST00000517216 168 ntBASIC3.19□□□□□ -1.9
TRAV20A0A0B4J274 IGKV2-38-201ENST00000517443 247 ntBASIC3.19□□□□□ -1.9
TRAV20A0A0B4J274 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC3.19□□□□□ -1.9
TRAV20A0A0B4J274 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.19□□□□□ -1.9
TRAV20A0A0B4J274 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.19□□□□□ -1.9
TRAV20A0A0B4J274 AC019176.2-201ENST00000611579 315 ntBASIC3.19□□□□□ -1.9
TRAV20A0A0B4J274 AC084757.4-201ENST00000616350 526 ntBASIC3.19□□□□□ -1.9
TRAV20A0A0B4J274 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.19□□□□□ -1.9
TRAV20A0A0B4J274 AL034408.1-202ENST00000636088 415 ntBASIC3.19□□□□□ -1.9
TRAV20A0A0B4J274 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
TRAV20A0A0B4J274 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.19□□□□□ -1.9
TRAV20A0A0B4J274 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
TRAV20A0A0B4J274 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
TRAV20A0A0B4J274 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
TRAV20A0A0B4J274 Z82209.1-201ENST00000422141 2135 ntBASIC3.19□□□□□ -1.9
TRAV20A0A0B4J274 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
TRAV20A0A0B4J274 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.18□□□□□ -1.9
TRAV20A0A0B4J274 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
TRAV20A0A0B4J274 RNA5SP119-201ENST00000362715 117 ntBASIC3.18□□□□□ -1.9
TRAV20A0A0B4J274 SNORA5A-201ENST00000384111 134 ntBASIC3.18□□□□□ -1.9
TRAV20A0A0B4J274 MIR300-201ENST00000401138 83 ntBASIC3.18□□□□□ -1.9
TRAV20A0A0B4J274 AL353705.1-201ENST00000433468 480 ntBASIC3.18□□□□□ -1.9
TRAV20A0A0B4J274 Z75741.1-201ENST00000446793 314 ntBASIC3.18□□□□□ -1.9
TRAV20A0A0B4J274 AL133162.1-201ENST00000463228 453 ntBASIC3.18□□□□□ -1.9
TRAV20A0A0B4J274 HMGN2P9-201ENST00000476875 229 ntBASIC3.18□□□□□ -1.9
TRAV20A0A0B4J274 AC006483.1-201ENST00000487308 313 ntBASIC3.18□□□□□ -1.9
TRAV20A0A0B4J274 AC091959.1-201ENST00000495857 238 ntBASIC3.18□□□□□ -1.9
TRAV20A0A0B4J274 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC3.18□□□□□ -1.9
TRAV20A0A0B4J274 AC109329.2-201ENST00000519658 482 ntBASIC3.18□□□□□ -1.9
TRAV20A0A0B4J274 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
TRAV20A0A0B4J274 MIR5187-201ENST00000583479 76 ntBASIC3.18□□□□□ -1.9
TRAV20A0A0B4J274 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
TRAV20A0A0B4J274 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
TRAV20A0A0B4J274 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
TRAV20A0A0B4J274 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
TRAV20A0A0B4J274 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
TRAV20A0A0B4J274 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
TRAV20A0A0B4J274 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
TRAV20A0A0B4J274 AL513302.2-201ENST00000562313 1842 ntBASIC3.17□□□□□ -1.9
TRAV20A0A0B4J274 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
TRAV20A0A0B4J274 AL021368.2-201ENST00000606125 5352 ntBASIC3.17□□□□□ -1.9
TRAV20A0A0B4J274 RNU6-461P-201ENST00000364195 107 ntBASIC3.17□□□□□ -1.9
TRAV20A0A0B4J274 SNORA73.2-201ENST00000364946 201 ntBASIC3.17□□□□□ -1.9
TRAV20A0A0B4J274 RNA5SP240-201ENST00000365355 128 ntBASIC3.17□□□□□ -1.9
TRAV20A0A0B4J274 RNU6-546P-201ENST00000383991 107 ntBASIC3.17□□□□□ -1.9
TRAV20A0A0B4J274 U8.11-201ENST00000384699 133 ntBASIC3.17□□□□□ -1.9
TRAV20A0A0B4J274 MIR199A2-201ENST00000385289 110 ntBASIC3.17□□□□□ -1.9
TRAV20A0A0B4J274 SNORD58.1-201ENST00000391313 66 ntBASIC3.17□□□□□ -1.9
TRAV20A0A0B4J274 MIR1283-1-201ENST00000408494 87 ntBASIC3.17□□□□□ -1.9
TRAV20A0A0B4J274 RNU2-32P-201ENST00000411193 191 ntBASIC3.17□□□□□ -1.9
TRAV20A0A0B4J274 AL513477.1-202ENST00000417061 214 ntBASIC3.17□□□□□ -1.9
TRAV20A0A0B4J274 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.17□□□□□ -1.9
TRAV20A0A0B4J274 Z98949.2-201ENST00000440996 144 ntBASIC3.17□□□□□ -1.9
TRAV20A0A0B4J274 U8.18-201ENST00000459285 133 ntBASIC3.17□□□□□ -1.9
TRAV20A0A0B4J274 SRIP1-201ENST00000489235 288 ntBASIC3.17□□□□□ -1.9
TRAV20A0A0B4J274 ATP5EP1-201ENST00000510257 156 ntBASIC3.17□□□□□ -1.9
TRAV20A0A0B4J274 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.17□□□□□ -1.9
TRAV20A0A0B4J274 RNU4-71P-201ENST00000516258 113 ntBASIC3.17□□□□□ -1.9
TRAV20A0A0B4J274 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.17□□□□□ -1.9
TRAV20A0A0B4J274 MIR4643-201ENST00000577473 78 ntBASIC3.17□□□□□ -1.9
TRAV20A0A0B4J274 MIR3145-201ENST00000580727 82 ntBASIC3.17□□□□□ -1.9
TRAV20A0A0B4J274 MIR4753-201ENST00000585119 83 ntBASIC3.17□□□□□ -1.9
TRAV20A0A0B4J274 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.17□□□□□ -1.9
TRAV20A0A0B4J274 AC009093.8-201ENST00000641769 292 ntBASIC3.17□□□□□ -1.9
TRAV20A0A0B4J274 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
TRAV20A0A0B4J274 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
TRAV20A0A0B4J274 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.17□□□□□ -1.9
TRAV20A0A0B4J274 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.17□□□□□ -1.9
TRAV20A0A0B4J274 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
TRAV20A0A0B4J274 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.16□□□□□ -1.9
TRAV20A0A0B4J274 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.16□□□□□ -1.9
TRAV20A0A0B4J274 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
TRAV20A0A0B4J274 SNORA63.1-201ENST00000362493 131 ntBASIC3.16□□□□□ -1.9
TRAV20A0A0B4J274 RNU6-324P-201ENST00000363957 106 ntBASIC3.16□□□□□ -1.9
TRAV20A0A0B4J274 Y_RNA.269-201ENST00000364685 89 ntBASIC3.16□□□□□ -1.9
TRAV20A0A0B4J274 MIR95-201ENST00000385072 81 ntBASIC3.16□□□□□ -1.9
TRAV20A0A0B4J274 RNU6-220P-201ENST00000390919 107 ntBASIC3.16□□□□□ -1.9
TRAV20A0A0B4J274 AL357075.1-201ENST00000404107 726 ntBASIC3.16□□□□□ -1.9
TRAV20A0A0B4J274 RNU2-63P-201ENST00000410792 194 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms