Protein–RNA interactions for Protein: A0A0B4J248

TRAV1-1, T-cell receptor alpha variable 1-1 (Fragment), humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1A0A0B4J248 MIR5695-201ENST00000579717 85 ntBASIC0.44□□□□□ -2.34
TRAV1-1A0A0B4J248 MTATP6P3-201ENST00000581686 676 ntBASIC0.44□□□□□ -2.34
TRAV1-1A0A0B4J248 RNU6-545P-201ENST00000362681 104 ntBASIC0.43□□□□□ -2.34
TRAV1-1A0A0B4J248 snoU2-30.2-201ENST00000362805 70 ntBASIC0.43□□□□□ -2.34
TRAV1-1A0A0B4J248 RNY1-201ENST00000364228 113 ntBASIC0.43□□□□□ -2.34
TRAV1-1A0A0B4J248 SNORD115-7-201ENST00000365306 82 ntBASIC0.43□□□□□ -2.34
TRAV1-1A0A0B4J248 Y_RNA.363-201ENST00000365529 113 ntBASIC0.43□□□□□ -2.34
TRAV1-1A0A0B4J248 RNU6-641P-201ENST00000384006 107 ntBASIC0.43□□□□□ -2.34
TRAV1-1A0A0B4J248 RNU6-533P-201ENST00000384144 107 ntBASIC0.43□□□□□ -2.34
TRAV1-1A0A0B4J248 RNU6-1031P-201ENST00000384773 107 ntBASIC0.43□□□□□ -2.34
TRAV1-1A0A0B4J248 MIR508-201ENST00000384857 115 ntBASIC0.43□□□□□ -2.34
TRAV1-1A0A0B4J248 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.43□□□□□ -2.34
TRAV1-1A0A0B4J248 AL117339.3-201ENST00000418733 162 ntBASIC0.43□□□□□ -2.34
TRAV1-1A0A0B4J248 AC119618.1-201ENST00000434191 222 ntBASIC0.43□□□□□ -2.34
TRAV1-1A0A0B4J248 USP9YP28-201ENST00000435142 589 ntBASIC0.43□□□□□ -2.34
TRAV1-1A0A0B4J248 AC245047.7-201ENST00000440265 293 ntBASIC0.43□□□□□ -2.34
TRAV1-1A0A0B4J248 RPS26P48-201ENST00000491713 339 ntBASIC0.43□□□□□ -2.34
TRAV1-1A0A0B4J248 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.43□□□□□ -2.34
TRAV1-1A0A0B4J248 AC024995.1-201ENST00000523014 93 ntBASIC0.43□□□□□ -2.34
TRAV1-1A0A0B4J248 MTND4LP18-201ENST00000526864 291 ntBASIC0.43□□□□□ -2.34
TRAV1-1A0A0B4J248 AC090517.1-201ENST00000569307 266 ntBASIC0.43□□□□□ -2.34
TRAV1-1A0A0B4J248 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.43□□□□□ -2.34
TRAV1-1A0A0B4J248 AL390123.1-201ENST00000603216 237 ntBASIC0.43□□□□□ -2.34
TRAV1-1A0A0B4J248 AL359999.1-201ENST00000604513 294 ntBASIC0.43□□□□□ -2.34
TRAV1-1A0A0B4J248 AL031667.3-201ENST00000620124 655 ntBASIC0.43□□□□□ -2.34
TRAV1-1A0A0B4J248 MIR5087-201ENST00000635826 76 ntBASIC0.43□□□□□ -2.34
TRAV1-1A0A0B4J248 MIR6767-201ENST00000637302 66 ntBASIC0.43□□□□□ -2.34
TRAV1-1A0A0B4J248 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.42□□□□□ -2.34
TRAV1-1A0A0B4J248 AL442644.1-201ENST00000454390 3105 ntBASIC0.42□□□□□ -2.34
TRAV1-1A0A0B4J248 AL391994.1-201ENST00000254724 282 ntBASIC0.42□□□□□ -2.34
TRAV1-1A0A0B4J248 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC0.42□□□□□ -2.34
TRAV1-1A0A0B4J248 MIR373-201ENST00000362273 69 ntBASIC0.42□□□□□ -2.34
TRAV1-1A0A0B4J248 RNA5SP347-201ENST00000362445 119 ntBASIC0.42□□□□□ -2.34
TRAV1-1A0A0B4J248 RNU6-179P-201ENST00000363350 107 ntBASIC0.42□□□□□ -2.34
TRAV1-1A0A0B4J248 RNU6-1235P-201ENST00000384559 107 ntBASIC0.42□□□□□ -2.34
TRAV1-1A0A0B4J248 RNU6-83P-201ENST00000384568 112 ntBASIC0.42□□□□□ -2.34
TRAV1-1A0A0B4J248 RNU6-636P-201ENST00000384598 107 ntBASIC0.42□□□□□ -2.34
TRAV1-1A0A0B4J248 MIR598-201ENST00000384868 97 ntBASIC0.42□□□□□ -2.34
TRAV1-1A0A0B4J248 AF228730.1-201ENST00000397972 663 ntBASIC0.42□□□□□ -2.34
TRAV1-1A0A0B4J248 MIR1283-1-201ENST00000408494 87 ntBASIC0.42□□□□□ -2.34
TRAV1-1A0A0B4J248 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC0.42□□□□□ -2.34
TRAV1-1A0A0B4J248 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.42□□□□□ -2.34
TRAV1-1A0A0B4J248 AC084290.1-201ENST00000434995 374 ntBASIC0.42□□□□□ -2.34
TRAV1-1A0A0B4J248 HMGN2P34-201ENST00000437647 269 ntBASIC0.42□□□□□ -2.34
TRAV1-1A0A0B4J248 AC073614.1-201ENST00000438690 650 ntBASIC0.42□□□□□ -2.34
TRAV1-1A0A0B4J248 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.42□□□□□ -2.34
TRAV1-1A0A0B4J248 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.42□□□□□ -2.34
TRAV1-1A0A0B4J248 AL157398.1-201ENST00000452981 186 ntBASIC0.42□□□□□ -2.34
TRAV1-1A0A0B4J248 RNU7-34P-201ENST00000459394 64 ntBASIC0.42□□□□□ -2.34
TRAV1-1A0A0B4J248 RNU6-498P-201ENST00000459468 107 ntBASIC0.42□□□□□ -2.34
TRAV1-1A0A0B4J248 SNORA31.10-201ENST00000516482 106 ntBASIC0.42□□□□□ -2.34
TRAV1-1A0A0B4J248 AC090142.3-201ENST00000519012 385 ntBASIC0.42□□□□□ -2.34
TRAV1-1A0A0B4J248 DEFB131C-201ENST00000528817 165 ntBASIC0.42□□□□□ -2.34
TRAV1-1A0A0B4J248 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC0.42□□□□□ -2.34
TRAV1-1A0A0B4J248 AL929325.1-201ENST00000603096 117 ntBASIC0.42□□□□□ -2.34
TRAV1-1A0A0B4J248 Z99289.3-201ENST00000605586 594 ntBASIC0.42□□□□□ -2.34
TRAV1-1A0A0B4J248 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC0.42□□□□□ -2.34
TRAV1-1A0A0B4J248 AC138749.5-201ENST00000611461 208 ntBASIC0.42□□□□□ -2.34
TRAV1-1A0A0B4J248 AC116165.2-201ENST00000616705 206 ntBASIC0.42□□□□□ -2.34
TRAV1-1A0A0B4J248 AL136221.1-201ENST00000621449 509 ntBASIC0.42□□□□□ -2.34
TRAV1-1A0A0B4J248 MPP6-209ENST00000625307 126 ntTSL 5 BASIC0.42□□□□□ -2.34
TRAV1-1A0A0B4J248 SNORA43.4-201ENST00000629559 138 ntBASIC0.42□□□□□ -2.34
TRAV1-1A0A0B4J248 AL445984.1-201ENST00000637834 659 ntBASIC0.42□□□□□ -2.34
TRAV1-1A0A0B4J248 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.41□□□□□ -2.34
TRAV1-1A0A0B4J248 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
TRAV1-1A0A0B4J248 RNU6-969P-201ENST00000383900 105 ntBASIC0.41□□□□□ -2.34
TRAV1-1A0A0B4J248 RNU6-950P-201ENST00000384651 107 ntBASIC0.41□□□□□ -2.34
TRAV1-1A0A0B4J248 ELOCP4-201ENST00000420090 333 ntBASIC0.41□□□□□ -2.34
TRAV1-1A0A0B4J248 AL445305.1-201ENST00000432577 575 ntBASIC0.41□□□□□ -2.34
TRAV1-1A0A0B4J248 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC0.41□□□□□ -2.34
TRAV1-1A0A0B4J248 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.41□□□□□ -2.34
TRAV1-1A0A0B4J248 EXOSC3P1-201ENST00000448649 500 ntBASIC0.41□□□□□ -2.34
TRAV1-1A0A0B4J248 AC092991.1-201ENST00000477176 376 ntBASIC0.41□□□□□ -2.34
TRAV1-1A0A0B4J248 WDR78-207ENST00000488333 613 ntTSL 3 BASIC0.41□□□□□ -2.34
TRAV1-1A0A0B4J248 COX6CP6-201ENST00000490840 228 ntBASIC0.41□□□□□ -2.34
TRAV1-1A0A0B4J248 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.41□□□□□ -2.34
TRAV1-1A0A0B4J248 AC091435.1-201ENST00000505442 584 ntBASIC0.41□□□□□ -2.34
TRAV1-1A0A0B4J248 AC116562.3-201ENST00000506136 177 ntBASIC0.41□□□□□ -2.34
TRAV1-1A0A0B4J248 NAF1-205ENST00000509434 385 ntTSL 3 BASIC0.41□□□□□ -2.34
TRAV1-1A0A0B4J248 AC091874.1-201ENST00000511402 339 ntBASIC0.41□□□□□ -2.34
TRAV1-1A0A0B4J248 RNU6-948P-201ENST00000516374 107 ntBASIC0.41□□□□□ -2.34
TRAV1-1A0A0B4J248 AC022616.3-201ENST00000523940 148 ntBASIC0.41□□□□□ -2.34
TRAV1-1A0A0B4J248 AC068587.5-201ENST00000528506 175 ntBASIC0.41□□□□□ -2.34
TRAV1-1A0A0B4J248 NTS-203ENST00000551529 801 ntTSL 3 BASIC0.41□□□□□ -2.34
TRAV1-1A0A0B4J248 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC0.41□□□□□ -2.34
TRAV1-1A0A0B4J248 AL121992.2-201ENST00000606262 256 ntBASIC0.41□□□□□ -2.34
TRAV1-1A0A0B4J248 AC138649.3-201ENST00000622154 254 ntBASIC0.41□□□□□ -2.34
TRAV1-1A0A0B4J248 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.41□□□□□ -2.34
TRAV1-1A0A0B4J248 MTND5P17-201ENST00000418405 1603 ntBASIC0.4□□□□□ -2.35
TRAV1-1A0A0B4J248 Y_RNA.18-201ENST00000362461 102 ntBASIC0.4□□□□□ -2.35
TRAV1-1A0A0B4J248 RNA5SP361-201ENST00000362686 118 ntBASIC0.4□□□□□ -2.35
TRAV1-1A0A0B4J248 RNU6-660P-201ENST00000364566 109 ntBASIC0.4□□□□□ -2.35
TRAV1-1A0A0B4J248 Y_RNA.287-201ENST00000364853 94 ntBASIC0.4□□□□□ -2.35
TRAV1-1A0A0B4J248 MIR653-201ENST00000385279 96 ntBASIC0.4□□□□□ -2.35
TRAV1-1A0A0B4J248 RNA5SP109-201ENST00000391010 116 ntBASIC0.4□□□□□ -2.35
TRAV1-1A0A0B4J248 RPS3AP1-201ENST00000413190 320 ntBASIC0.4□□□□□ -2.35
TRAV1-1A0A0B4J248 AC012306.1-201ENST00000423267 114 ntBASIC0.4□□□□□ -2.35
TRAV1-1A0A0B4J248 AL606517.2-201ENST00000442855 241 ntBASIC0.4□□□□□ -2.35
TRAV1-1A0A0B4J248 MTCYBP1-201ENST00000454315 1119 ntBASIC0.4□□□□□ -2.35
TRAV1-1A0A0B4J248 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC0.4□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms