Protein–RNA interactions for Protein: A0A0B4J238

TRAV1-2, T-cell receptor alpha variable 1-2 (Fragment), humanhuman

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2A0A0B4J238 AC019205.3-201ENST00000424573 156 ntBASIC-0.19□□□□□ -2.44
TRAV1-2A0A0B4J238 AC243964.1-201ENST00000441814 261 ntBASIC-0.19□□□□□ -2.44
TRAV1-2A0A0B4J238 STAG3L5P-204ENST00000443759 179 ntBASIC-0.19□□□□□ -2.44
TRAV1-2A0A0B4J238 AC016700.2-201ENST00000446011 156 ntBASIC-0.19□□□□□ -2.44
TRAV1-2A0A0B4J238 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC-0.19□□□□□ -2.44
TRAV1-2A0A0B4J238 AC015911.1-201ENST00000495111 156 ntBASIC-0.19□□□□□ -2.44
TRAV1-2A0A0B4J238 RPS23P5-201ENST00000495419 428 ntBASIC-0.19□□□□□ -2.44
TRAV1-2A0A0B4J238 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC-0.19□□□□□ -2.44
TRAV1-2A0A0B4J238 AP003716.2-201ENST00000528260 108 ntBASIC-0.19□□□□□ -2.44
TRAV1-2A0A0B4J238 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC-0.19□□□□□ -2.44
TRAV1-2A0A0B4J238 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC-0.19□□□□□ -2.44
TRAV1-2A0A0B4J238 AL512347.1-201ENST00000566420 503 ntBASIC-0.19□□□□□ -2.44
TRAV1-2A0A0B4J238 MIR3923-201ENST00000579521 83 ntBASIC-0.19□□□□□ -2.44
TRAV1-2A0A0B4J238 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC-0.19□□□□□ -2.44
TRAV1-2A0A0B4J238 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC-0.2□□□□□ -2.44
TRAV1-2A0A0B4J238 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC-0.2□□□□□ -2.44
TRAV1-2A0A0B4J238 MIR103A2-201ENST00000362154 78 ntBASIC-0.2□□□□□ -2.44
TRAV1-2A0A0B4J238 Y_RNA.4-201ENST00000362333 112 ntBASIC-0.2□□□□□ -2.44
TRAV1-2A0A0B4J238 SNORA32.1-201ENST00000364514 115 ntBASIC-0.2□□□□□ -2.44
TRAV1-2A0A0B4J238 RNU5E-6P-201ENST00000365574 115 ntBASIC-0.2□□□□□ -2.44
TRAV1-2A0A0B4J238 RNU6-207P-201ENST00000384137 107 ntBASIC-0.2□□□□□ -2.44
TRAV1-2A0A0B4J238 RNU6-190P-201ENST00000384154 102 ntBASIC-0.2□□□□□ -2.44
TRAV1-2A0A0B4J238 RNU6-378P-201ENST00000384324 107 ntBASIC-0.2□□□□□ -2.44
TRAV1-2A0A0B4J238 RNU6-417P-201ENST00000384712 107 ntBASIC-0.2□□□□□ -2.44
TRAV1-2A0A0B4J238 MIR518A1-201ENST00000385068 85 ntBASIC-0.2□□□□□ -2.44
TRAV1-2A0A0B4J238 RNA5SP63-201ENST00000391225 112 ntBASIC-0.2□□□□□ -2.44
TRAV1-2A0A0B4J238 AL031779.1-201ENST00000415663 330 ntBASIC-0.2□□□□□ -2.44
TRAV1-2A0A0B4J238 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC-0.2□□□□□ -2.44
TRAV1-2A0A0B4J238 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC-0.2□□□□□ -2.44
TRAV1-2A0A0B4J238 HSFY7P-201ENST00000432672 318 ntBASIC-0.2□□□□□ -2.44
TRAV1-2A0A0B4J238 HSFY8P-201ENST00000437934 318 ntBASIC-0.2□□□□□ -2.44
TRAV1-2A0A0B4J238 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC-0.2□□□□□ -2.44
TRAV1-2A0A0B4J238 RNU4-77P-201ENST00000516692 156 ntBASIC-0.2□□□□□ -2.44
TRAV1-2A0A0B4J238 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC-0.2□□□□□ -2.44
TRAV1-2A0A0B4J238 ZNF519P3-201ENST00000557158 1032 ntBASIC-0.2□□□□□ -2.44
TRAV1-2A0A0B4J238 MIR3678-201ENST00000578455 94 ntBASIC-0.2□□□□□ -2.44
TRAV1-2A0A0B4J238 MIR4305-201ENST00000583252 102 ntBASIC-0.2□□□□□ -2.44
TRAV1-2A0A0B4J238 MIR6515-201ENST00000619843 57 ntBASIC-0.2□□□□□ -2.44
TRAV1-2A0A0B4J238 AP000484.1-201ENST00000620067 1252 ntBASIC-0.2□□□□□ -2.44
TRAV1-2A0A0B4J238 AC097372.5-201ENST00000623665 376 ntBASIC-0.2□□□□□ -2.44
TRAV1-2A0A0B4J238 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC-0.2□□□□□ -2.44
TRAV1-2A0A0B4J238 AC092104.1-201ENST00000497346 1441 ntBASIC-0.21□□□□□ -2.44
TRAV1-2A0A0B4J238 RNU6-511P-201ENST00000363496 107 ntBASIC-0.21□□□□□ -2.44
TRAV1-2A0A0B4J238 RNU6-960P-201ENST00000364056 120 ntBASIC-0.21□□□□□ -2.44
TRAV1-2A0A0B4J238 RNU6-1141P-201ENST00000364520 107 ntBASIC-0.21□□□□□ -2.44
TRAV1-2A0A0B4J238 MIR578-201ENST00000384828 96 ntBASIC-0.21□□□□□ -2.44
TRAV1-2A0A0B4J238 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC-0.21□□□□□ -2.44
TRAV1-2A0A0B4J238 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC-0.21□□□□□ -2.44
TRAV1-2A0A0B4J238 AC010975.2-201ENST00000427781 588 ntBASIC-0.21□□□□□ -2.44
TRAV1-2A0A0B4J238 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC-0.21□□□□□ -2.44
TRAV1-2A0A0B4J238 AC244670.1-201ENST00000436879 112 ntBASIC-0.21□□□□□ -2.44
TRAV1-2A0A0B4J238 AC067940.1-201ENST00000458411 300 ntBASIC-0.21□□□□□ -2.44
TRAV1-2A0A0B4J238 LINC01399-202ENST00000458450 244 ntBASIC-0.21□□□□□ -2.44
TRAV1-2A0A0B4J238 AC025465.4-201ENST00000513422 638 ntBASIC-0.21□□□□□ -2.44
TRAV1-2A0A0B4J238 RNU6-1146P-201ENST00000516282 102 ntBASIC-0.21□□□□□ -2.44
TRAV1-2A0A0B4J238 RNU6-1096P-201ENST00000517089 102 ntBASIC-0.21□□□□□ -2.44
TRAV1-2A0A0B4J238 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC-0.21□□□□□ -2.44
TRAV1-2A0A0B4J238 AP003072.2-201ENST00000527756 676 ntBASIC-0.21□□□□□ -2.44
TRAV1-2A0A0B4J238 LRRC6P1-201ENST00000532188 885 ntBASIC-0.21□□□□□ -2.44
TRAV1-2A0A0B4J238 TMF1P1-201ENST00000576058 373 ntBASIC-0.21□□□□□ -2.44
TRAV1-2A0A0B4J238 MIR3192-201ENST00000584920 77 ntBASIC-0.21□□□□□ -2.44
TRAV1-2A0A0B4J238 MIR548AC-201ENST00000585049 88 ntBASIC-0.21□□□□□ -2.44
TRAV1-2A0A0B4J238 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC-0.21□□□□□ -2.44
TRAV1-2A0A0B4J238 AC026741.1-201ENST00000605892 482 ntBASIC-0.21□□□□□ -2.44
TRAV1-2A0A0B4J238 MESTIT1_1.1-201ENST00000618871 140 ntBASIC-0.21□□□□□ -2.44
TRAV1-2A0A0B4J238 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC-0.21□□□□□ -2.44
TRAV1-2A0A0B4J238 AL031667.3-201ENST00000620124 655 ntBASIC-0.21□□□□□ -2.44
TRAV1-2A0A0B4J238 AC097460.3-201ENST00000623099 442 ntBASIC-0.21□□□□□ -2.44
TRAV1-2A0A0B4J238 U4.7-201ENST00000638126 106 ntBASIC-0.21□□□□□ -2.44
TRAV1-2A0A0B4J238 RNU6-527P-201ENST00000363425 104 ntBASIC-0.22□□□□□ -2.44
TRAV1-2A0A0B4J238 RNU6-354P-201ENST00000383862 107 ntBASIC-0.22□□□□□ -2.44
TRAV1-2A0A0B4J238 RNU6V-201ENST00000384105 107 ntBASIC-0.22□□□□□ -2.44
TRAV1-2A0A0B4J238 RNU6-610P-201ENST00000384264 107 ntBASIC-0.22□□□□□ -2.44
TRAV1-2A0A0B4J238 RNU6-43P-201ENST00000384302 107 ntBASIC-0.22□□□□□ -2.44
TRAV1-2A0A0B4J238 RNU6-1179P-201ENST00000384667 107 ntBASIC-0.22□□□□□ -2.44
TRAV1-2A0A0B4J238 MIR193B-201ENST00000384907 83 ntBASIC-0.22□□□□□ -2.44
TRAV1-2A0A0B4J238 SNORA26.3-201ENST00000391119 136 ntBASIC-0.22□□□□□ -2.44
TRAV1-2A0A0B4J238 MIR1827-201ENST00000408549 66 ntBASIC-0.22□□□□□ -2.44
TRAV1-2A0A0B4J238 RN7SKP266-201ENST00000410232 287 ntBASIC-0.22□□□□□ -2.44
TRAV1-2A0A0B4J238 MTCO2P34-201ENST00000421994 607 ntBASIC-0.22□□□□□ -2.44
TRAV1-2A0A0B4J238 AL356583.2-201ENST00000426536 280 ntBASIC-0.22□□□□□ -2.44
TRAV1-2A0A0B4J238 USP9YP28-201ENST00000435142 589 ntBASIC-0.22□□□□□ -2.44
TRAV1-2A0A0B4J238 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC-0.22□□□□□ -2.44
TRAV1-2A0A0B4J238 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC-0.22□□□□□ -2.44
TRAV1-2A0A0B4J238 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC-0.22□□□□□ -2.44
TRAV1-2A0A0B4J238 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC-0.22□□□□□ -2.44
TRAV1-2A0A0B4J238 MIR5190-201ENST00000581537 80 ntBASIC-0.22□□□□□ -2.44
TRAV1-2A0A0B4J238 AC010620.1-201ENST00000601088 1102 ntBASIC-0.22□□□□□ -2.44
TRAV1-2A0A0B4J238 AC092634.7-201ENST00000621022 103 ntBASIC-0.22□□□□□ -2.44
TRAV1-2A0A0B4J238 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC-0.22□□□□□ -2.44
TRAV1-2A0A0B4J238 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC-0.23□□□□□ -2.45
TRAV1-2A0A0B4J238 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC-0.23□□□□□ -2.45
TRAV1-2A0A0B4J238 MIR18A-201ENST00000362310 71 ntBASIC-0.23□□□□□ -2.45
TRAV1-2A0A0B4J238 RNU6-105P-201ENST00000363909 104 ntBASIC-0.23□□□□□ -2.45
TRAV1-2A0A0B4J238 RNY4P16-201ENST00000364768 94 ntBASIC-0.23□□□□□ -2.45
TRAV1-2A0A0B4J238 RNU5E-7P-201ENST00000365290 117 ntBASIC-0.23□□□□□ -2.45
TRAV1-2A0A0B4J238 RNY1P14-201ENST00000384426 108 ntBASIC-0.23□□□□□ -2.45
TRAV1-2A0A0B4J238 RNA5SP496-201ENST00000391240 109 ntBASIC-0.23□□□□□ -2.45
TRAV1-2A0A0B4J238 MIR300-201ENST00000401138 83 ntBASIC-0.23□□□□□ -2.45
TRAV1-2A0A0B4J238 MRPL42P3-201ENST00000401492 326 ntBASIC-0.23□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms