Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.52□□□□□ -2.01
SNX9Q9Y5X1 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC2.52□□□□□ -2.01
SNX9Q9Y5X1 AC124916.1-201ENST00000444020 547 ntBASIC2.52□□□□□ -2.01
SNX9Q9Y5X1 RPL39P29-201ENST00000447779 157 ntBASIC2.52□□□□□ -2.01
SNX9Q9Y5X1 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
SNX9Q9Y5X1 AP001324.2-201ENST00000461163 319 ntBASIC2.52□□□□□ -2.01
SNX9Q9Y5X1 RPL30P12-201ENST00000474666 353 ntBASIC2.52□□□□□ -2.01
SNX9Q9Y5X1 AL163540.1-201ENST00000485382 386 ntBASIC2.52□□□□□ -2.01
SNX9Q9Y5X1 RPL30P1-201ENST00000488676 339 ntBASIC2.52□□□□□ -2.01
SNX9Q9Y5X1 GZMAP1-201ENST00000503054 631 ntBASIC2.52□□□□□ -2.01
SNX9Q9Y5X1 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.52□□□□□ -2.01
SNX9Q9Y5X1 SNORD53-201ENST00000579969 78 ntBASIC2.52□□□□□ -2.01
SNX9Q9Y5X1 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.52□□□□□ -2.01
SNX9Q9Y5X1 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.52□□□□□ -2.01
SNX9Q9Y5X1 ZNF299P-201ENST00000406845 1804 ntBASIC2.52□□□□□ -2.01
SNX9Q9Y5X1 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
SNX9Q9Y5X1 MIR21-201ENST00000362134 72 ntBASIC2.51□□□□□ -2.01
SNX9Q9Y5X1 Y_RNA.40-201ENST00000362645 93 ntBASIC2.51□□□□□ -2.01
SNX9Q9Y5X1 RNU6-1010P-201ENST00000362757 107 ntBASIC2.51□□□□□ -2.01
SNX9Q9Y5X1 RNY1P16-201ENST00000363063 111 ntBASIC2.51□□□□□ -2.01
SNX9Q9Y5X1 RNU6-1141P-201ENST00000364520 107 ntBASIC2.51□□□□□ -2.01
SNX9Q9Y5X1 Y_RNA.445-201ENST00000384168 102 ntBASIC2.51□□□□□ -2.01
SNX9Q9Y5X1 RNU6-220P-201ENST00000390919 107 ntBASIC2.51□□□□□ -2.01
SNX9Q9Y5X1 RN7SKP61-201ENST00000410642 295 ntBASIC2.51□□□□□ -2.01
SNX9Q9Y5X1 MRPS18CP6-201ENST00000423587 223 ntBASIC2.51□□□□□ -2.01
SNX9Q9Y5X1 AL035666.1-201ENST00000446195 348 ntBASIC2.51□□□□□ -2.01
SNX9Q9Y5X1 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.51□□□□□ -2.01
SNX9Q9Y5X1 RPL17P19-201ENST00000489069 552 ntBASIC2.51□□□□□ -2.01
SNX9Q9Y5X1 RNA5SP281-201ENST00000516504 135 ntBASIC2.51□□□□□ -2.01
SNX9Q9Y5X1 RNU6-307P-201ENST00000516743 106 ntBASIC2.51□□□□□ -2.01
SNX9Q9Y5X1 AL442663.2-201ENST00000554385 511 ntBASIC2.51□□□□□ -2.01
SNX9Q9Y5X1 AC010928.2-201ENST00000588017 287 ntBASIC2.51□□□□□ -2.01
SNX9Q9Y5X1 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.51□□□□□ -2.01
SNX9Q9Y5X1 Y_RNA.812-201ENST00000610788 101 ntBASIC2.51□□□□□ -2.01
SNX9Q9Y5X1 Y_RNA.784-201ENST00000613803 101 ntBASIC2.51□□□□□ -2.01
SNX9Q9Y5X1 Y_RNA.787-201ENST00000616522 101 ntBASIC2.51□□□□□ -2.01
SNX9Q9Y5X1 Y_RNA.780-201ENST00000617336 101 ntBASIC2.51□□□□□ -2.01
SNX9Q9Y5X1 AL590808.1-201ENST00000618696 141 ntBASIC2.51□□□□□ -2.01
SNX9Q9Y5X1 Y_RNA.801-201ENST00000619005 101 ntBASIC2.51□□□□□ -2.01
SNX9Q9Y5X1 AC009541.1-201ENST00000438279 2662 ntBASIC2.51□□□□□ -2.01
SNX9Q9Y5X1 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
SNX9Q9Y5X1 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
SNX9Q9Y5X1 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.5□□□□□ -2.01
SNX9Q9Y5X1 AL109809.4-201ENST00000603520 2185 ntBASIC2.5□□□□□ -2.01
SNX9Q9Y5X1 Y_RNA.28-201ENST00000362554 111 ntBASIC2.5□□□□□ -2.01
SNX9Q9Y5X1 RNU5B-2P-201ENST00000363036 113 ntBASIC2.5□□□□□ -2.01
SNX9Q9Y5X1 SNORA22B-201ENST00000383876 138 ntBASIC2.5□□□□□ -2.01
SNX9Q9Y5X1 RNU1-52P-201ENST00000384190 164 ntBASIC2.5□□□□□ -2.01
SNX9Q9Y5X1 MIR144-201ENST00000384886 86 ntBASIC2.5□□□□□ -2.01
SNX9Q9Y5X1 SNORA26.3-201ENST00000391119 136 ntBASIC2.5□□□□□ -2.01
SNX9Q9Y5X1 RNU2-23P-201ENST00000410545 195 ntBASIC2.5□□□□□ -2.01
SNX9Q9Y5X1 RNU6-1245P-201ENST00000411130 106 ntBASIC2.5□□□□□ -2.01
SNX9Q9Y5X1 CYCSP48-201ENST00000417124 323 ntBASIC2.5□□□□□ -2.01
SNX9Q9Y5X1 AC008267.5-201ENST00000424928 265 ntBASIC2.5□□□□□ -2.01
SNX9Q9Y5X1 AL353997.1-201ENST00000432936 108 ntBASIC2.5□□□□□ -2.01
SNX9Q9Y5X1 AL513124.1-201ENST00000450410 614 ntBASIC2.5□□□□□ -2.01
SNX9Q9Y5X1 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.5□□□□□ -2.01
SNX9Q9Y5X1 RPL23AP75-201ENST00000491601 451 ntBASIC2.5□□□□□ -2.01
SNX9Q9Y5X1 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.5□□□□□ -2.01
SNX9Q9Y5X1 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.5□□□□□ -2.01
SNX9Q9Y5X1 AP002770.2-201ENST00000543613 532 ntBASIC2.5□□□□□ -2.01
SNX9Q9Y5X1 PRELID2P1-201ENST00000552837 301 ntBASIC2.5□□□□□ -2.01
SNX9Q9Y5X1 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.5□□□□□ -2.01
SNX9Q9Y5X1 MIR5571-201ENST00000577998 113 ntBASIC2.5□□□□□ -2.01
SNX9Q9Y5X1 uc_338.14-201ENST00000613162 166 ntBASIC2.5□□□□□ -2.01
SNX9Q9Y5X1 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.5□□□□□ -2.01
SNX9Q9Y5X1 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
SNX9Q9Y5X1 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.5□□□□□ -2.01
SNX9Q9Y5X1 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
SNX9Q9Y5X1 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
SNX9Q9Y5X1 RNU6-874P-201ENST00000362390 105 ntBASIC2.49□□□□□ -2.01
SNX9Q9Y5X1 RNU6-99P-201ENST00000364721 107 ntBASIC2.49□□□□□ -2.01
SNX9Q9Y5X1 RNU6-1286P-201ENST00000383871 107 ntBASIC2.49□□□□□ -2.01
SNX9Q9Y5X1 SNORA29-201ENST00000384183 140 ntBASIC2.49□□□□□ -2.01
SNX9Q9Y5X1 RNY1P14-201ENST00000384426 108 ntBASIC2.49□□□□□ -2.01
SNX9Q9Y5X1 MIR147B-201ENST00000390185 80 ntBASIC2.49□□□□□ -2.01
SNX9Q9Y5X1 RNA5SP494-201ENST00000410653 129 ntBASIC2.49□□□□□ -2.01
SNX9Q9Y5X1 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.49□□□□□ -2.01
SNX9Q9Y5X1 AIMP1P2-201ENST00000425294 312 ntBASIC2.49□□□□□ -2.01
SNX9Q9Y5X1 AC078809.1-201ENST00000427601 140 ntBASIC2.49□□□□□ -2.01
SNX9Q9Y5X1 RPS15AP28-201ENST00000435088 386 ntBASIC2.49□□□□□ -2.01
SNX9Q9Y5X1 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.49□□□□□ -2.01
SNX9Q9Y5X1 Z82188.1-201ENST00000436709 154 ntBASIC2.49□□□□□ -2.01
SNX9Q9Y5X1 MTND4P19-201ENST00000446659 478 ntBASIC2.49□□□□□ -2.01
SNX9Q9Y5X1 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.49□□□□□ -2.01
SNX9Q9Y5X1 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.49□□□□□ -2.01
SNX9Q9Y5X1 snoU13.14-201ENST00000459372 104 ntBASIC2.49□□□□□ -2.01
SNX9Q9Y5X1 RPL30P10-201ENST00000488148 337 ntBASIC2.49□□□□□ -2.01
SNX9Q9Y5X1 AF186996.7-201ENST00000492781 209 ntBASIC2.49□□□□□ -2.01
SNX9Q9Y5X1 SCARNA3-201ENST00000517097 143 ntBASIC2.49□□□□□ -2.01
SNX9Q9Y5X1 AC109329.1-201ENST00000518744 317 ntBASIC2.49□□□□□ -2.01
SNX9Q9Y5X1 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.49□□□□□ -2.01
SNX9Q9Y5X1 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.49□□□□□ -2.01
SNX9Q9Y5X1 AC079598.5-201ENST00000547460 117 ntBASIC2.49□□□□□ -2.01
SNX9Q9Y5X1 AC121758.2-201ENST00000553271 193 ntBASIC2.49□□□□□ -2.01
SNX9Q9Y5X1 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.49□□□□□ -2.01
SNX9Q9Y5X1 AC091544.4-201ENST00000555268 342 ntBASIC2.49□□□□□ -2.01
SNX9Q9Y5X1 MIR3199-1-201ENST00000582434 88 ntBASIC2.49□□□□□ -2.01
SNX9Q9Y5X1 AL078605.1-201ENST00000603529 500 ntBASIC2.49□□□□□ -2.01
SNX9Q9Y5X1 MIR6895-201ENST00000613497 78 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms