Protein–RNA interactions for Protein: Q9Y4C0

NRXN3, Neurexin-3, humanhuman

Predictions only

Length 1,643 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN3Q9Y4C0 AC091304.9-201ENST00000612091 226 ntBASIC-1.04□□□□□ -2.58
NRXN3Q9Y4C0 AC068792.1-201ENST00000621354 417 ntBASIC-1.04□□□□□ -2.58
NRXN3Q9Y4C0 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC-1.05□□□□□ -2.58
NRXN3Q9Y4C0 Y_RNA.439-201ENST00000384119 94 ntBASIC-1.05□□□□□ -2.58
NRXN3Q9Y4C0 Y_RNA.498-201ENST00000384460 102 ntBASIC-1.05□□□□□ -2.58
NRXN3Q9Y4C0 RNU2-15P-201ENST00000410692 191 ntBASIC-1.05□□□□□ -2.58
NRXN3Q9Y4C0 C1DP2-201ENST00000418167 426 ntBASIC-1.05□□□□□ -2.58
NRXN3Q9Y4C0 MTCO1P19-201ENST00000443487 500 ntBASIC-1.05□□□□□ -2.58
NRXN3Q9Y4C0 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC-1.05□□□□□ -2.58
NRXN3Q9Y4C0 EXOSC3P1-201ENST00000448649 500 ntBASIC-1.05□□□□□ -2.58
NRXN3Q9Y4C0 C1DP4-201ENST00000455429 424 ntBASIC-1.05□□□□□ -2.58
NRXN3Q9Y4C0 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC-1.05□□□□□ -2.58
NRXN3Q9Y4C0 AC008628.1-201ENST00000508663 265 ntBASIC-1.05□□□□□ -2.58
NRXN3Q9Y4C0 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC-1.05□□□□□ -2.58
NRXN3Q9Y4C0 AC074133.1-201ENST00000515696 183 ntBASIC-1.05□□□□□ -2.58
NRXN3Q9Y4C0 RNU6-180P-201ENST00000516697 61 ntBASIC-1.05□□□□□ -2.58
NRXN3Q9Y4C0 AC023442.1-201ENST00000531247 422 ntBASIC-1.05□□□□□ -2.58
NRXN3Q9Y4C0 AC018630.3-201ENST00000542637 96 ntBASIC-1.05□□□□□ -2.58
NRXN3Q9Y4C0 AC093249.1-201ENST00000567049 203 ntBASIC-1.05□□□□□ -2.58
NRXN3Q9Y4C0 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC-1.05□□□□□ -2.58
NRXN3Q9Y4C0 AP001981.2-201ENST00000603241 418 ntBASIC-1.05□□□□□ -2.58
NRXN3Q9Y4C0 AC004067.1-201ENST00000608733 700 ntBASIC-1.05□□□□□ -2.58
NRXN3Q9Y4C0 AL109659.3-201ENST00000624985 950 ntBASIC-1.05□□□□□ -2.58
NRXN3Q9Y4C0 RNU6-1297P-201ENST00000384415 104 ntBASIC-1.06□□□□□ -2.58
NRXN3Q9Y4C0 MTCO2P1-201ENST00000424648 477 ntBASIC-1.06□□□□□ -2.58
NRXN3Q9Y4C0 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC-1.06□□□□□ -2.58
NRXN3Q9Y4C0 MTCO3P29-201ENST00000432119 779 ntBASIC-1.06□□□□□ -2.58
NRXN3Q9Y4C0 AC092427.1-201ENST00000439177 601 ntBASIC-1.06□□□□□ -2.58
NRXN3Q9Y4C0 AC069257.2-201ENST00000441819 155 ntBASIC-1.06□□□□□ -2.58
NRXN3Q9Y4C0 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC-1.06□□□□□ -2.58
NRXN3Q9Y4C0 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC-1.06□□□□□ -2.58
NRXN3Q9Y4C0 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC-1.06□□□□□ -2.58
NRXN3Q9Y4C0 MIR6755-201ENST00000619993 66 ntBASIC-1.06□□□□□ -2.58
NRXN3Q9Y4C0 RNU6-944P-201ENST00000364023 107 ntBASIC-1.07□□□□□ -2.58
NRXN3Q9Y4C0 SNORA51.10-201ENST00000384418 136 ntBASIC-1.07□□□□□ -2.58
NRXN3Q9Y4C0 OFD1P7Y-201ENST00000454643 1155 ntBASIC-1.07□□□□□ -2.58
NRXN3Q9Y4C0 AC090572.1-201ENST00000519251 160 ntBASIC-1.07□□□□□ -2.58
NRXN3Q9Y4C0 AC011979.2-201ENST00000527568 352 ntBASIC-1.07□□□□□ -2.58
NRXN3Q9Y4C0 AP003716.2-201ENST00000528260 108 ntBASIC-1.07□□□□□ -2.58
NRXN3Q9Y4C0 SUMO2P14-201ENST00000604488 293 ntBASIC-1.07□□□□□ -2.58
NRXN3Q9Y4C0 RNU4-16P-201ENST00000364737 141 ntBASIC-1.07□□□□□ -2.58
NRXN3Q9Y4C0 MTCO2P31-201ENST00000402702 684 ntBASIC-1.07□□□□□ -2.58
NRXN3Q9Y4C0 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC-1.07□□□□□ -2.58
NRXN3Q9Y4C0 SUMO2P18-201ENST00000518873 252 ntBASIC-1.07□□□□□ -2.58
NRXN3Q9Y4C0 AC093023.1-201ENST00000547375 507 ntBASIC-1.07□□□□□ -2.58
NRXN3Q9Y4C0 MIR3115-201ENST00000577915 68 ntBASIC-1.07□□□□□ -2.58
NRXN3Q9Y4C0 MIR4441-201ENST00000582623 100 ntBASIC-1.07□□□□□ -2.58
NRXN3Q9Y4C0 AC104695.3-201ENST00000604052 296 ntBASIC-1.07□□□□□ -2.58
NRXN3Q9Y4C0 MIR3976-201ENST00000606807 139 ntBASIC-1.07□□□□□ -2.58
NRXN3Q9Y4C0 AC022960.3-201ENST00000619794 441 ntBASIC-1.07□□□□□ -2.58
NRXN3Q9Y4C0 MIR1248-201ENST00000629190 106 ntBASIC-1.07□□□□□ -2.58
NRXN3Q9Y4C0 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC-1.07□□□□□ -2.58
NRXN3Q9Y4C0 SNORA26.3-201ENST00000391119 136 ntBASIC-1.08□□□□□ -2.58
NRXN3Q9Y4C0 RNA5SP163-201ENST00000410304 99 ntBASIC-1.08□□□□□ -2.58
NRXN3Q9Y4C0 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC-1.08□□□□□ -2.58
NRXN3Q9Y4C0 CECR9-201ENST00000453421 199 ntBASIC-1.08□□□□□ -2.58
NRXN3Q9Y4C0 USP9YP25-201ENST00000457708 443 ntBASIC-1.08□□□□□ -2.58
NRXN3Q9Y4C0 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC-1.08□□□□□ -2.58
NRXN3Q9Y4C0 MTND4LP26-201ENST00000518144 282 ntBASIC-1.08□□□□□ -2.58
NRXN3Q9Y4C0 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC-1.08□□□□□ -2.58
NRXN3Q9Y4C0 AC040926.1-201ENST00000530195 238 ntBASIC-1.08□□□□□ -2.58
NRXN3Q9Y4C0 AL590396.4-201ENST00000636779 956 ntBASIC-1.08□□□□□ -2.58
NRXN3Q9Y4C0 VPS35-212ENST00000640313 141 ntTSL 5 BASIC-1.08□□□□□ -2.58
NRXN3Q9Y4C0 RNU6-925P-201ENST00000384629 104 ntBASIC-1.09□□□□□ -2.58
NRXN3Q9Y4C0 AL034345.1-201ENST00000407768 123 ntBASIC-1.09□□□□□ -2.58
NRXN3Q9Y4C0 AC027644.1-201ENST00000419595 298 ntBASIC-1.09□□□□□ -2.58
NRXN3Q9Y4C0 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC-1.09□□□□□ -2.58
NRXN3Q9Y4C0 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC-1.09□□□□□ -2.58
NRXN3Q9Y4C0 AC010424.1-201ENST00000506336 297 ntBASIC-1.09□□□□□ -2.58
NRXN3Q9Y4C0 AC027338.1-201ENST00000514840 825 ntBASIC-1.09□□□□□ -2.58
NRXN3Q9Y4C0 AC027419.1-201ENST00000522976 328 ntBASIC-1.09□□□□□ -2.58
NRXN3Q9Y4C0 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC-1.09□□□□□ -2.58
NRXN3Q9Y4C0 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC-1.09□□□□□ -2.58
NRXN3Q9Y4C0 AC131055.1-201ENST00000584626 316 ntBASIC-1.09□□□□□ -2.58
NRXN3Q9Y4C0 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC-1.09□□□□□ -2.58
NRXN3Q9Y4C0 ZNF736P9Y-201ENST00000439586 1345 ntBASIC-1.09□□□□□ -2.58
NRXN3Q9Y4C0 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC-1.1□□□□□ -2.58
NRXN3Q9Y4C0 RNU6-862P-201ENST00000362804 105 ntBASIC-1.1□□□□□ -2.59
NRXN3Q9Y4C0 MLLT10P1-201ENST00000418346 262 ntBASIC-1.1□□□□□ -2.59
NRXN3Q9Y4C0 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC-1.1□□□□□ -2.59
NRXN3Q9Y4C0 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC-1.1□□□□□ -2.59
NRXN3Q9Y4C0 AC133104.1-201ENST00000429100 218 ntBASIC-1.1□□□□□ -2.59
NRXN3Q9Y4C0 AC012308.1-201ENST00000451232 178 ntBASIC-1.1□□□□□ -2.59
NRXN3Q9Y4C0 MRPL42P4-201ENST00000453267 443 ntBASIC-1.1□□□□□ -2.59
NRXN3Q9Y4C0 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC-1.1□□□□□ -2.59
NRXN3Q9Y4C0 RNU6-848P-201ENST00000515948 107 ntBASIC-1.1□□□□□ -2.59
NRXN3Q9Y4C0 RNU6-617P-201ENST00000516147 107 ntBASIC-1.1□□□□□ -2.59
NRXN3Q9Y4C0 RNU6-473P-201ENST00000516164 107 ntBASIC-1.1□□□□□ -2.59
NRXN3Q9Y4C0 RNU6-1049P-201ENST00000516414 107 ntBASIC-1.1□□□□□ -2.59
NRXN3Q9Y4C0 AC068790.2-201ENST00000602601 557 ntBASIC-1.1□□□□□ -2.59
NRXN3Q9Y4C0 RNU1-76P-201ENST00000362903 159 ntBASIC-1.11□□□□□ -2.59
NRXN3Q9Y4C0 Y_RNA.330-201ENST00000365230 109 ntBASIC-1.11□□□□□ -2.59
NRXN3Q9Y4C0 Y_RNA.452-201ENST00000384202 108 ntBASIC-1.11□□□□□ -2.59
NRXN3Q9Y4C0 RNU6-1162P-201ENST00000384443 104 ntBASIC-1.11□□□□□ -2.59
NRXN3Q9Y4C0 MIR573-201ENST00000384964 99 ntBASIC-1.11□□□□□ -2.59
NRXN3Q9Y4C0 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC-1.11□□□□□ -2.59
NRXN3Q9Y4C0 RAC1P6-201ENST00000423911 575 ntBASIC-1.11□□□□□ -2.59
NRXN3Q9Y4C0 OR9P1P-201ENST00000496431 281 ntBASIC-1.11□□□□□ -2.59
NRXN3Q9Y4C0 RNA5SP470-201ENST00000516463 106 ntBASIC-1.11□□□□□ -2.59
NRXN3Q9Y4C0 RNU6-1274P-201ENST00000384557 107 ntBASIC-1.11□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 123.2 ms