Protein–RNA interactions for Protein: Q9Y3Q4

HCN4, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN4Q9Y3Q4 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
HCN4Q9Y3Q4 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.18□□□□□ -1.74
HCN4Q9Y3Q4 Y_RNA.40-201ENST00000362645 93 ntBASIC4.17□□□□□ -1.74
HCN4Q9Y3Q4 Y_RNA.127-201ENST00000363386 109 ntBASIC4.17□□□□□ -1.74
HCN4Q9Y3Q4 SNORD74.4-201ENST00000364129 80 ntBASIC4.17□□□□□ -1.74
HCN4Q9Y3Q4 RNA5-8SP4-201ENST00000365096 150 ntBASIC4.17□□□□□ -1.74
HCN4Q9Y3Q4 MIR513C-201ENST00000401352 84 ntBASIC4.17□□□□□ -1.74
HCN4Q9Y3Q4 RNA5SP504-201ENST00000410676 117 ntBASIC4.17□□□□□ -1.74
HCN4Q9Y3Q4 SNORA74C-2-201ENST00000411179 201 ntBASIC4.17□□□□□ -1.74
HCN4Q9Y3Q4 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC4.17□□□□□ -1.74
HCN4Q9Y3Q4 AC027124.2-201ENST00000428249 105 ntBASIC4.17□□□□□ -1.74
HCN4Q9Y3Q4 TOMM22P2-201ENST00000430735 237 ntBASIC4.17□□□□□ -1.74
HCN4Q9Y3Q4 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.17□□□□□ -1.74
HCN4Q9Y3Q4 AL441985.1-201ENST00000457727 251 ntBASIC4.17□□□□□ -1.74
HCN4Q9Y3Q4 snoU13.28-201ENST00000459235 104 ntBASIC4.17□□□□□ -1.74
HCN4Q9Y3Q4 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC4.17□□□□□ -1.74
HCN4Q9Y3Q4 RNU6-237P-201ENST00000515985 71 ntBASIC4.17□□□□□ -1.74
HCN4Q9Y3Q4 GNRHR2P1-201ENST00000555315 631 ntBASIC4.17□□□□□ -1.74
HCN4Q9Y3Q4 Y_RNA.802-201ENST00000614892 130 ntBASIC4.17□□□□□ -1.74
HCN4Q9Y3Q4 uc_338.32-201ENST00000615087 172 ntBASIC4.17□□□□□ -1.74
HCN4Q9Y3Q4 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC4.17□□□□□ -1.74
HCN4Q9Y3Q4 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.17□□□□□ -1.74
HCN4Q9Y3Q4 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
HCN4Q9Y3Q4 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HCN4Q9Y3Q4 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.16□□□□□ -1.74
HCN4Q9Y3Q4 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.16□□□□□ -1.74
HCN4Q9Y3Q4 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HCN4Q9Y3Q4 RNU1-15P-201ENST00000353977 144 ntBASIC4.16□□□□□ -1.74
HCN4Q9Y3Q4 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
HCN4Q9Y3Q4 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
HCN4Q9Y3Q4 SNORD114-19-201ENST00000363072 75 ntBASIC4.16□□□□□ -1.74
HCN4Q9Y3Q4 SNORD87-201ENST00000364849 89 ntBASIC4.16□□□□□ -1.74
HCN4Q9Y3Q4 RNU6-215P-201ENST00000365169 102 ntBASIC4.16□□□□□ -1.74
HCN4Q9Y3Q4 RNU4-11P-201ENST00000365287 132 ntBASIC4.16□□□□□ -1.74
HCN4Q9Y3Q4 Y_RNA.361-201ENST00000365515 120 ntBASIC4.16□□□□□ -1.74
HCN4Q9Y3Q4 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.16□□□□□ -1.74
HCN4Q9Y3Q4 RPL23AP70-201ENST00000483361 460 ntBASIC4.16□□□□□ -1.74
HCN4Q9Y3Q4 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC4.16□□□□□ -1.74
HCN4Q9Y3Q4 RNU4ATAC17P-201ENST00000517272 120 ntBASIC4.16□□□□□ -1.74
HCN4Q9Y3Q4 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC4.16□□□□□ -1.74
HCN4Q9Y3Q4 AC109810.1-201ENST00000534066 224 ntBASIC4.16□□□□□ -1.74
HCN4Q9Y3Q4 EIF4BP1-201ENST00000554881 351 ntBASIC4.16□□□□□ -1.74
HCN4Q9Y3Q4 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.16□□□□□ -1.74
HCN4Q9Y3Q4 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC4.16□□□□□ -1.74
HCN4Q9Y3Q4 AC012493.2-201ENST00000595083 291 ntBASIC4.16□□□□□ -1.74
HCN4Q9Y3Q4 MIR7151-201ENST00000617477 60 ntBASIC4.16□□□□□ -1.74
HCN4Q9Y3Q4 MIR8057-201ENST00000620957 69 ntBASIC4.16□□□□□ -1.74
HCN4Q9Y3Q4 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HCN4Q9Y3Q4 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.15□□□□□ -1.74
HCN4Q9Y3Q4 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
HCN4Q9Y3Q4 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.74
HCN4Q9Y3Q4 RNA5SP307-201ENST00000362863 116 ntBASIC4.15□□□□□ -1.75
HCN4Q9Y3Q4 RNA5SP50-201ENST00000363731 107 ntBASIC4.15□□□□□ -1.75
HCN4Q9Y3Q4 Y_RNA.261-201ENST00000364631 102 ntBASIC4.15□□□□□ -1.75
HCN4Q9Y3Q4 Y_RNA.293-201ENST00000364908 93 ntBASIC4.15□□□□□ -1.75
HCN4Q9Y3Q4 Y_RNA.337-201ENST00000365312 102 ntBASIC4.15□□□□□ -1.75
HCN4Q9Y3Q4 Y_RNA.456-201ENST00000384232 111 ntBASIC4.15□□□□□ -1.75
HCN4Q9Y3Q4 SNORA67.2-201ENST00000384300 149 ntBASIC4.15□□□□□ -1.75
HCN4Q9Y3Q4 MIR616-201ENST00000385293 97 ntBASIC4.15□□□□□ -1.75
HCN4Q9Y3Q4 MIR526A2-201ENST00000390198 65 ntBASIC4.15□□□□□ -1.75
HCN4Q9Y3Q4 AL133475.1-201ENST00000404414 305 ntBASIC4.15□□□□□ -1.75
HCN4Q9Y3Q4 COTL1P1-201ENST00000422309 375 ntBASIC4.15□□□□□ -1.75
HCN4Q9Y3Q4 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC4.15□□□□□ -1.75
HCN4Q9Y3Q4 Z75741.1-201ENST00000446793 314 ntBASIC4.15□□□□□ -1.75
HCN4Q9Y3Q4 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.15□□□□□ -1.75
HCN4Q9Y3Q4 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC4.15□□□□□ -1.75
HCN4Q9Y3Q4 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.15□□□□□ -1.75
HCN4Q9Y3Q4 AC087499.8-201ENST00000578406 226 ntBASIC4.15□□□□□ -1.75
HCN4Q9Y3Q4 MIR5006-201ENST00000583027 110 ntBASIC4.15□□□□□ -1.75
HCN4Q9Y3Q4 MIR6076-201ENST00000617521 113 ntBASIC4.15□□□□□ -1.75
HCN4Q9Y3Q4 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
HCN4Q9Y3Q4 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.15□□□□□ -1.75
HCN4Q9Y3Q4 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.15□□□□□ -1.75
HCN4Q9Y3Q4 AF127577.6-201ENST00000623352 2191 ntBASIC4.14□□□□□ -1.75
HCN4Q9Y3Q4 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.14□□□□□ -1.75
HCN4Q9Y3Q4 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
HCN4Q9Y3Q4 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
HCN4Q9Y3Q4 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.14□□□□□ -1.75
HCN4Q9Y3Q4 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.14□□□□□ -1.75
HCN4Q9Y3Q4 AC058791.1-201ENST00000608412 3198 ntBASIC4.14□□□□□ -1.75
HCN4Q9Y3Q4 Y_RNA.71-201ENST00000362892 104 ntBASIC4.14□□□□□ -1.75
HCN4Q9Y3Q4 RNU4-10P-201ENST00000364383 140 ntBASIC4.14□□□□□ -1.75
HCN4Q9Y3Q4 Y_RNA.310-201ENST00000365063 113 ntBASIC4.14□□□□□ -1.75
HCN4Q9Y3Q4 MIR539-201ENST00000365690 78 ntBASIC4.14□□□□□ -1.75
HCN4Q9Y3Q4 MIR513A2-201ENST00000385249 127 ntBASIC4.14□□□□□ -1.75
HCN4Q9Y3Q4 RPS3P1-201ENST00000456781 192 ntBASIC4.14□□□□□ -1.75
HCN4Q9Y3Q4 RPL35AP15-201ENST00000468042 339 ntBASIC4.14□□□□□ -1.75
HCN4Q9Y3Q4 SCARNA8-201ENST00000515924 131 ntBASIC4.14□□□□□ -1.75
HCN4Q9Y3Q4 RNU2-44P-201ENST00000516795 194 ntBASIC4.14□□□□□ -1.75
HCN4Q9Y3Q4 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC4.14□□□□□ -1.75
HCN4Q9Y3Q4 CYP4A43P-201ENST00000568156 121 ntBASIC4.14□□□□□ -1.75
HCN4Q9Y3Q4 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC4.14□□□□□ -1.75
HCN4Q9Y3Q4 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.14□□□□□ -1.75
HCN4Q9Y3Q4 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.14□□□□□ -1.75
HCN4Q9Y3Q4 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.14□□□□□ -1.75
HCN4Q9Y3Q4 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
HCN4Q9Y3Q4 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
HCN4Q9Y3Q4 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
HCN4Q9Y3Q4 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
HCN4Q9Y3Q4 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms