Protein–RNA interactions for Protein: Q9Y3B4

SF3B6, Splicing factor 3B subunit 6, humanhuman

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6Q9Y3B4 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.31□□□□□ -1.88
SF3B6Q9Y3B4 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SF3B6Q9Y3B4 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.31□□□□□ -1.88
SF3B6Q9Y3B4 Y_RNA.170-201ENST00000363746 110 ntBASIC3.31□□□□□ -1.88
SF3B6Q9Y3B4 RNU6-1305P-201ENST00000364353 104 ntBASIC3.31□□□□□ -1.88
SF3B6Q9Y3B4 Y_RNA.240-201ENST00000364469 95 ntBASIC3.31□□□□□ -1.88
SF3B6Q9Y3B4 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SF3B6Q9Y3B4 MIR548B-201ENST00000385247 97 ntBASIC3.31□□□□□ -1.88
SF3B6Q9Y3B4 RNU6-763P-201ENST00000390865 106 ntBASIC3.31□□□□□ -1.88
SF3B6Q9Y3B4 AL357139.1-201ENST00000407792 426 ntBASIC3.31□□□□□ -1.88
SF3B6Q9Y3B4 MIR1193-201ENST00000408109 78 ntBASIC3.31□□□□□ -1.88
SF3B6Q9Y3B4 AL117339.2-201ENST00000430475 180 ntBASIC3.31□□□□□ -1.88
SF3B6Q9Y3B4 TOMM22P2-201ENST00000430735 237 ntBASIC3.31□□□□□ -1.88
SF3B6Q9Y3B4 RBMY2UP-201ENST00000453474 324 ntBASIC3.31□□□□□ -1.88
SF3B6Q9Y3B4 U8.19-201ENST00000459095 133 ntBASIC3.31□□□□□ -1.88
SF3B6Q9Y3B4 RNA5SP112-201ENST00000515937 99 ntBASIC3.31□□□□□ -1.88
SF3B6Q9Y3B4 MIR449C-201ENST00000516047 92 ntBASIC3.31□□□□□ -1.88
SF3B6Q9Y3B4 RNU6-1098P-201ENST00000516772 96 ntBASIC3.31□□□□□ -1.88
SF3B6Q9Y3B4 AC009127.3-201ENST00000570531 403 ntBASIC3.31□□□□□ -1.88
SF3B6Q9Y3B4 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.31□□□□□ -1.88
SF3B6Q9Y3B4 SNORA62.6-201ENST00000606322 83 ntBASIC3.31□□□□□ -1.88
SF3B6Q9Y3B4 AC104465.1-201ENST00000611365 139 ntBASIC3.31□□□□□ -1.88
SF3B6Q9Y3B4 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SF3B6Q9Y3B4 RNA5SP196-201ENST00000625967 102 ntBASIC3.31□□□□□ -1.88
SF3B6Q9Y3B4 AL034408.1-202ENST00000636088 415 ntBASIC3.31□□□□□ -1.88
SF3B6Q9Y3B4 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SF3B6Q9Y3B4 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SF3B6Q9Y3B4 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
SF3B6Q9Y3B4 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
SF3B6Q9Y3B4 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC3.3□□□□□ -1.88
SF3B6Q9Y3B4 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SF3B6Q9Y3B4 U3.8-201ENST00000363675 217 ntBASIC3.3□□□□□ -1.88
SF3B6Q9Y3B4 AP002088.1-201ENST00000382740 395 ntBASIC3.3□□□□□ -1.88
SF3B6Q9Y3B4 RNU6-804P-201ENST00000384286 107 ntBASIC3.3□□□□□ -1.88
SF3B6Q9Y3B4 SNORA19-201ENST00000384737 128 ntBASIC3.3□□□□□ -1.88
SF3B6Q9Y3B4 SNORA57.1-201ENST00000391227 145 ntBASIC3.3□□□□□ -1.88
SF3B6Q9Y3B4 AL691449.1-201ENST00000426570 421 ntBASIC3.3□□□□□ -1.88
SF3B6Q9Y3B4 YME1L1P1-201ENST00000429435 297 ntBASIC3.3□□□□□ -1.88
SF3B6Q9Y3B4 AC146507.2-201ENST00000460608 476 ntBASIC3.3□□□□□ -1.88
SF3B6Q9Y3B4 AC010401.1-201ENST00000463867 348 ntBASIC3.3□□□□□ -1.88
SF3B6Q9Y3B4 AC091021.1-201ENST00000468051 388 ntBASIC3.3□□□□□ -1.88
SF3B6Q9Y3B4 AC110768.1-201ENST00000509222 400 ntBASIC3.3□□□□□ -1.88
SF3B6Q9Y3B4 RAC1P5-201ENST00000512182 576 ntBASIC3.3□□□□□ -1.88
SF3B6Q9Y3B4 SNORD59.2-201ENST00000516873 68 ntBASIC3.3□□□□□ -1.88
SF3B6Q9Y3B4 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC3.3□□□□□ -1.88
SF3B6Q9Y3B4 MIR5692C2-201ENST00000577959 77 ntBASIC3.3□□□□□ -1.88
SF3B6Q9Y3B4 VN1R85P-201ENST00000601587 426 ntBASIC3.3□□□□□ -1.88
SF3B6Q9Y3B4 AL606490.9-201ENST00000603331 271 ntBASIC3.3□□□□□ -1.88
SF3B6Q9Y3B4 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.3□□□□□ -1.88
SF3B6Q9Y3B4 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SF3B6Q9Y3B4 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.3□□□□□ -1.88
SF3B6Q9Y3B4 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
SF3B6Q9Y3B4 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SF3B6Q9Y3B4 AC091564.4-201ENST00000533934 2194 ntBASIC3.29□□□□□ -1.88
SF3B6Q9Y3B4 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.29□□□□□ -1.88
SF3B6Q9Y3B4 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
SF3B6Q9Y3B4 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
SF3B6Q9Y3B4 Y_RNA.8-201ENST00000362353 102 ntBASIC3.29□□□□□ -1.88
SF3B6Q9Y3B4 RNU6-801P-201ENST00000364087 105 ntBASIC3.29□□□□□ -1.88
SF3B6Q9Y3B4 Y_RNA.243-201ENST00000364481 109 ntBASIC3.29□□□□□ -1.88
SF3B6Q9Y3B4 Y_RNA.435-201ENST00000384095 112 ntBASIC3.29□□□□□ -1.88
SF3B6Q9Y3B4 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.29□□□□□ -1.88
SF3B6Q9Y3B4 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.29□□□□□ -1.88
SF3B6Q9Y3B4 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC3.29□□□□□ -1.88
SF3B6Q9Y3B4 RNU5F-4P-201ENST00000516581 114 ntBASIC3.29□□□□□ -1.88
SF3B6Q9Y3B4 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.29□□□□□ -1.88
SF3B6Q9Y3B4 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC3.29□□□□□ -1.88
SF3B6Q9Y3B4 AC008873.1-201ENST00000625051 138 ntBASIC3.29□□□□□ -1.88
SF3B6Q9Y3B4 U6.115-201ENST00000636045 103 ntBASIC3.29□□□□□ -1.88
SF3B6Q9Y3B4 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SF3B6Q9Y3B4 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.29□□□□□ -1.88
SF3B6Q9Y3B4 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SF3B6Q9Y3B4 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.29□□□□□ -1.88
SF3B6Q9Y3B4 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.29□□□□□ -1.88
SF3B6Q9Y3B4 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
SF3B6Q9Y3B4 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.29□□□□□ -1.88
SF3B6Q9Y3B4 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SF3B6Q9Y3B4 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
SF3B6Q9Y3B4 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.28□□□□□ -1.88
SF3B6Q9Y3B4 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SF3B6Q9Y3B4 MIR30E-201ENST00000362104 92 ntBASIC3.28□□□□□ -1.88
SF3B6Q9Y3B4 RNA5SP283-201ENST00000365604 119 ntBASIC3.28□□□□□ -1.88
SF3B6Q9Y3B4 RNU6-1083P-201ENST00000384022 107 ntBASIC3.28□□□□□ -1.88
SF3B6Q9Y3B4 MIR29B2-201ENST00000385055 81 ntBASIC3.28□□□□□ -1.88
SF3B6Q9Y3B4 SNORA26.5-201ENST00000391215 123 ntBASIC3.28□□□□□ -1.88
SF3B6Q9Y3B4 TRAPPC2P7-201ENST00000509650 231 ntBASIC3.28□□□□□ -1.88
SF3B6Q9Y3B4 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.28□□□□□ -1.88
SF3B6Q9Y3B4 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.28□□□□□ -1.88
SF3B6Q9Y3B4 SNORA70.14-201ENST00000516205 110 ntBASIC3.28□□□□□ -1.88
SF3B6Q9Y3B4 MTND5P41-201ENST00000517498 206 ntBASIC3.28□□□□□ -1.88
SF3B6Q9Y3B4 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.28□□□□□ -1.88
SF3B6Q9Y3B4 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.28□□□□□ -1.88
SF3B6Q9Y3B4 MIR3910-1-201ENST00000580936 111 ntBASIC3.28□□□□□ -1.88
SF3B6Q9Y3B4 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.28□□□□□ -1.88
SF3B6Q9Y3B4 AC084757.4-201ENST00000616350 526 ntBASIC3.28□□□□□ -1.88
SF3B6Q9Y3B4 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SF3B6Q9Y3B4 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.28□□□□□ -1.88
SF3B6Q9Y3B4 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
SF3B6Q9Y3B4 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SF3B6Q9Y3B4 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 123.2 ms