Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 AC008269.2-201ENST00000561915 1105 ntBASIC3□□□□□ -1.93
SSX2IPQ9Y2D8 AC105137.2-201ENST00000569073 466 ntBASIC3□□□□□ -1.93
SSX2IPQ9Y2D8 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3□□□□□ -1.93
SSX2IPQ9Y2D8 AL391813.1-201ENST00000603098 260 ntBASIC3□□□□□ -1.93
SSX2IPQ9Y2D8 AL355297.3-201ENST00000604082 446 ntBASIC3□□□□□ -1.93
SSX2IPQ9Y2D8 PRR13P7-201ENST00000605538 430 ntBASIC3□□□□□ -1.93
SSX2IPQ9Y2D8 MIR6715A-201ENST00000615929 79 ntBASIC3□□□□□ -1.93
SSX2IPQ9Y2D8 AC137590.2-201ENST00000619709 240 ntBASIC3□□□□□ -1.93
SSX2IPQ9Y2D8 IGHVIII-44-202ENST00000636235 289 ntBASIC3□□□□□ -1.93
SSX2IPQ9Y2D8 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3□□□□□ -1.93
SSX2IPQ9Y2D8 AP000560.1-201ENST00000624150 1937 ntBASIC2.99□□□□□ -1.93
SSX2IPQ9Y2D8 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
SSX2IPQ9Y2D8 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
SSX2IPQ9Y2D8 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.99□□□□□ -1.93
SSX2IPQ9Y2D8 Y_RNA.153-201ENST00000363615 91 ntBASIC2.99□□□□□ -1.93
SSX2IPQ9Y2D8 RNU6-450P-201ENST00000364654 107 ntBASIC2.99□□□□□ -1.93
SSX2IPQ9Y2D8 RNU6-196P-201ENST00000384315 107 ntBASIC2.99□□□□□ -1.93
SSX2IPQ9Y2D8 AL138827.1-201ENST00000402666 306 ntBASIC2.99□□□□□ -1.93
SSX2IPQ9Y2D8 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.99□□□□□ -1.93
SSX2IPQ9Y2D8 Z82188.1-201ENST00000436709 154 ntBASIC2.99□□□□□ -1.93
SSX2IPQ9Y2D8 AC244670.1-201ENST00000436879 112 ntBASIC2.99□□□□□ -1.93
SSX2IPQ9Y2D8 GPM6BP3-201ENST00000442797 145 ntBASIC2.99□□□□□ -1.93
SSX2IPQ9Y2D8 U8.20-201ENST00000459445 131 ntBASIC2.99□□□□□ -1.93
SSX2IPQ9Y2D8 MTATP8P1-201ENST00000467115 207 ntBASIC2.99□□□□□ -1.93
SSX2IPQ9Y2D8 RPL30P12-201ENST00000474666 353 ntBASIC2.99□□□□□ -1.93
SSX2IPQ9Y2D8 MTCO2P24-201ENST00000515611 426 ntBASIC2.99□□□□□ -1.93
SSX2IPQ9Y2D8 MIR2355-201ENST00000517199 87 ntBASIC2.99□□□□□ -1.93
SSX2IPQ9Y2D8 AC115990.1-201ENST00000526957 301 ntBASIC2.99□□□□□ -1.93
SSX2IPQ9Y2D8 AC021231.3-201ENST00000558497 370 ntBASIC2.99□□□□□ -1.93
SSX2IPQ9Y2D8 MIR5571-201ENST00000577998 113 ntBASIC2.99□□□□□ -1.93
SSX2IPQ9Y2D8 RPS29P30-201ENST00000600975 111 ntBASIC2.99□□□□□ -1.93
SSX2IPQ9Y2D8 AC013412.1-201ENST00000610687 192 ntBASIC2.99□□□□□ -1.93
SSX2IPQ9Y2D8 AL021879.1-201ENST00000611756 288 ntBASIC2.99□□□□□ -1.93
SSX2IPQ9Y2D8 7SK.10-201ENST00000621414 298 ntBASIC2.99□□□□□ -1.93
SSX2IPQ9Y2D8 SNORA43.4-201ENST00000629559 138 ntBASIC2.99□□□□□ -1.93
SSX2IPQ9Y2D8 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.99□□□□□ -1.93
SSX2IPQ9Y2D8 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.99□□□□□ -1.93
SSX2IPQ9Y2D8 ZNF72P-201ENST00000425869 1908 ntBASIC2.99□□□□□ -1.93
SSX2IPQ9Y2D8 Z82195.2-201ENST00000612348 18351 ntBASIC2.99□□□□□ -1.93
SSX2IPQ9Y2D8 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
SSX2IPQ9Y2D8 RNU6-874P-201ENST00000362390 105 ntBASIC2.98□□□□□ -1.93
SSX2IPQ9Y2D8 RNU4-82P-201ENST00000362443 140 ntBASIC2.98□□□□□ -1.93
SSX2IPQ9Y2D8 Y_RNA.176-201ENST00000363815 109 ntBASIC2.98□□□□□ -1.93
SSX2IPQ9Y2D8 U3.13-201ENST00000364804 214 ntBASIC2.98□□□□□ -1.93
SSX2IPQ9Y2D8 RNU6-17P-201ENST00000384245 107 ntBASIC2.98□□□□□ -1.93
SSX2IPQ9Y2D8 RNU6-18P-201ENST00000384527 107 ntBASIC2.98□□□□□ -1.93
SSX2IPQ9Y2D8 RNU2-25P-201ENST00000411041 191 ntBASIC2.98□□□□□ -1.93
SSX2IPQ9Y2D8 AL451074.5-201ENST00000415894 435 ntBASIC2.98□□□□□ -1.93
SSX2IPQ9Y2D8 MTCYBP9-201ENST00000431021 303 ntBASIC2.98□□□□□ -1.93
SSX2IPQ9Y2D8 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.98□□□□□ -1.93
SSX2IPQ9Y2D8 RNU7-87P-201ENST00000459343 62 ntBASIC2.98□□□□□ -1.93
SSX2IPQ9Y2D8 RPS27AP9-201ENST00000477681 438 ntBASIC2.98□□□□□ -1.93
SSX2IPQ9Y2D8 RPL30P1-201ENST00000488676 339 ntBASIC2.98□□□□□ -1.93
SSX2IPQ9Y2D8 GZMAP1-201ENST00000503054 631 ntBASIC2.98□□□□□ -1.93
SSX2IPQ9Y2D8 ANXA2P1-201ENST00000505539 926 ntBASIC2.98□□□□□ -1.93
SSX2IPQ9Y2D8 RAC1P5-201ENST00000512182 576 ntBASIC2.98□□□□□ -1.93
SSX2IPQ9Y2D8 Y_RNA.715-201ENST00000517082 110 ntBASIC2.98□□□□□ -1.93
SSX2IPQ9Y2D8 AP002770.2-201ENST00000543613 532 ntBASIC2.98□□□□□ -1.93
SSX2IPQ9Y2D8 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.98□□□□□ -1.93
SSX2IPQ9Y2D8 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.98□□□□□ -1.93
SSX2IPQ9Y2D8 AC010928.2-201ENST00000588017 287 ntBASIC2.98□□□□□ -1.93
SSX2IPQ9Y2D8 AC110079.1-202ENST00000635213 138 ntBASIC2.98□□□□□ -1.93
SSX2IPQ9Y2D8 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.98□□□□□ -1.93
SSX2IPQ9Y2D8 RNA5SP432-201ENST00000362480 116 ntBASIC2.97□□□□□ -1.93
SSX2IPQ9Y2D8 RNU5B-2P-201ENST00000363036 113 ntBASIC2.97□□□□□ -1.93
SSX2IPQ9Y2D8 Y_RNA.106-201ENST00000363189 100 ntBASIC2.97□□□□□ -1.93
SSX2IPQ9Y2D8 RNU6-1285P-201ENST00000363480 105 ntBASIC2.97□□□□□ -1.93
SSX2IPQ9Y2D8 RNU4-50P-201ENST00000364361 141 ntBASIC2.97□□□□□ -1.93
SSX2IPQ9Y2D8 RNU6-1180P-201ENST00000364935 107 ntBASIC2.97□□□□□ -1.93
SSX2IPQ9Y2D8 Y_RNA.358-201ENST00000365491 99 ntBASIC2.97□□□□□ -1.93
SSX2IPQ9Y2D8 Y_RNA.551-201ENST00000384661 102 ntBASIC2.97□□□□□ -1.93
SSX2IPQ9Y2D8 MIR153-2-201ENST00000385225 87 ntBASIC2.97□□□□□ -1.93
SSX2IPQ9Y2D8 MIR767-201ENST00000390228 109 ntBASIC2.97□□□□□ -1.93
SSX2IPQ9Y2D8 MIR1302-3-201ENST00000408128 138 ntBASIC2.97□□□□□ -1.93
SSX2IPQ9Y2D8 AC138623.1-201ENST00000418060 216 ntBASIC2.97□□□□□ -1.93
SSX2IPQ9Y2D8 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.97□□□□□ -1.93
SSX2IPQ9Y2D8 AC087477.1-201ENST00000465747 340 ntBASIC2.97□□□□□ -1.93
SSX2IPQ9Y2D8 AF186996.7-201ENST00000492781 209 ntBASIC2.97□□□□□ -1.93
SSX2IPQ9Y2D8 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.97□□□□□ -1.93
SSX2IPQ9Y2D8 AC096725.1-201ENST00000514266 313 ntBASIC2.97□□□□□ -1.93
SSX2IPQ9Y2D8 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.97□□□□□ -1.93
SSX2IPQ9Y2D8 RPS15AP11-201ENST00000594193 385 ntBASIC2.97□□□□□ -1.93
SSX2IPQ9Y2D8 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.97□□□□□ -1.93
SSX2IPQ9Y2D8 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.96□□□□□ -1.94
SSX2IPQ9Y2D8 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.94
SSX2IPQ9Y2D8 RNU6-1010P-201ENST00000362757 107 ntBASIC2.96□□□□□ -1.94
SSX2IPQ9Y2D8 SNORA51.11-201ENST00000384442 131 ntBASIC2.96□□□□□ -1.94
SSX2IPQ9Y2D8 MIR512-1-201ENST00000384913 84 ntBASIC2.96□□□□□ -1.94
SSX2IPQ9Y2D8 MIR32-201ENST00000384965 70 ntBASIC2.96□□□□□ -1.94
SSX2IPQ9Y2D8 SNORA26.3-201ENST00000391119 136 ntBASIC2.96□□□□□ -1.94
SSX2IPQ9Y2D8 RNA5SP354-201ENST00000391247 136 ntBASIC2.96□□□□□ -1.94
SSX2IPQ9Y2D8 RNU2-52P-201ENST00000410680 190 ntBASIC2.96□□□□□ -1.94
SSX2IPQ9Y2D8 CYCSP48-201ENST00000417124 323 ntBASIC2.96□□□□□ -1.94
SSX2IPQ9Y2D8 ARL5AP4-201ENST00000430731 512 ntBASIC2.96□□□□□ -1.94
SSX2IPQ9Y2D8 AC004383.1-201ENST00000438135 289 ntBASIC2.96□□□□□ -1.94
SSX2IPQ9Y2D8 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.96□□□□□ -1.94
SSX2IPQ9Y2D8 EEF1B2P7-201ENST00000451177 676 ntBASIC2.96□□□□□ -1.94
SSX2IPQ9Y2D8 TOMM22P6-201ENST00000465035 409 ntBASIC2.96□□□□□ -1.94
SSX2IPQ9Y2D8 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.96□□□□□ -1.94
SSX2IPQ9Y2D8 AC109329.1-201ENST00000518744 317 ntBASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 263 ms