Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 RNU6-418P-201ENST00000384035 107 ntBASIC4.62□□□□□ -1.67
VPS9D1Q9Y2B5 RNY1P6-201ENST00000384193 109 ntBASIC4.62□□□□□ -1.67
VPS9D1Q9Y2B5 MIR300-201ENST00000401138 83 ntBASIC4.62□□□□□ -1.67
VPS9D1Q9Y2B5 RNU6-1098P-201ENST00000516772 96 ntBASIC4.62□□□□□ -1.67
VPS9D1Q9Y2B5 RN7SKP289-201ENST00000517244 295 ntBASIC4.62□□□□□ -1.67
VPS9D1Q9Y2B5 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.62□□□□□ -1.67
VPS9D1Q9Y2B5 HSPE1P5-201ENST00000561489 272 ntBASIC4.62□□□□□ -1.67
VPS9D1Q9Y2B5 MIR4753-201ENST00000585119 83 ntBASIC4.62□□□□□ -1.67
VPS9D1Q9Y2B5 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
VPS9D1Q9Y2B5 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
VPS9D1Q9Y2B5 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
VPS9D1Q9Y2B5 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
VPS9D1Q9Y2B5 AC007496.3-201ENST00000624987 3443 ntBASIC4.62□□□□□ -1.67
VPS9D1Q9Y2B5 OR51H2P-202ENST00000641424 3046 ntBASIC4.62□□□□□ -1.67
VPS9D1Q9Y2B5 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.61□□□□□ -1.67
VPS9D1Q9Y2B5 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
VPS9D1Q9Y2B5 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
VPS9D1Q9Y2B5 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
VPS9D1Q9Y2B5 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
VPS9D1Q9Y2B5 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
VPS9D1Q9Y2B5 snoU2_19.1-201ENST00000362361 80 ntBASIC4.61□□□□□ -1.67
VPS9D1Q9Y2B5 RNU6-219P-201ENST00000364728 107 ntBASIC4.61□□□□□ -1.67
VPS9D1Q9Y2B5 SNORD115-35-201ENST00000365122 82 ntBASIC4.61□□□□□ -1.67
VPS9D1Q9Y2B5 MRPL35P3-201ENST00000421557 364 ntBASIC4.61□□□□□ -1.67
VPS9D1Q9Y2B5 RNU6-1073P-201ENST00000517182 106 ntBASIC4.61□□□□□ -1.67
VPS9D1Q9Y2B5 ATP5J2P6-201ENST00000565203 266 ntBASIC4.61□□□□□ -1.67
VPS9D1Q9Y2B5 AC091042.1-201ENST00000579213 173 ntBASIC4.61□□□□□ -1.67
VPS9D1Q9Y2B5 MIR3934-201ENST00000579806 107 ntBASIC4.61□□□□□ -1.67
VPS9D1Q9Y2B5 FAS-AS1.2-201ENST00000620386 170 ntBASIC4.61□□□□□ -1.67
VPS9D1Q9Y2B5 U3.53-201ENST00000628922 216 ntBASIC4.61□□□□□ -1.67
VPS9D1Q9Y2B5 MIR6715B-201ENST00000637172 77 ntBASIC4.61□□□□□ -1.67
VPS9D1Q9Y2B5 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.61□□□□□ -1.67
VPS9D1Q9Y2B5 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
VPS9D1Q9Y2B5 AC015813.6-201ENST00000624409 5808 ntBASIC4.61□□□□□ -1.67
VPS9D1Q9Y2B5 AC010300.1-201ENST00000600671 5134 ntBASIC4.61□□□□□ -1.67
VPS9D1Q9Y2B5 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
VPS9D1Q9Y2B5 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
VPS9D1Q9Y2B5 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
VPS9D1Q9Y2B5 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
VPS9D1Q9Y2B5 Y_RNA.96-201ENST00000363092 109 ntBASIC4.6□□□□□ -1.67
VPS9D1Q9Y2B5 Y_RNA.531-201ENST00000384589 121 ntBASIC4.6□□□□□ -1.67
VPS9D1Q9Y2B5 RNU6-750P-201ENST00000390946 107 ntBASIC4.6□□□□□ -1.67
VPS9D1Q9Y2B5 RNU6-57P-201ENST00000411348 103 ntBASIC4.6□□□□□ -1.67
VPS9D1Q9Y2B5 BTF3P4-201ENST00000418852 495 ntBASIC4.6□□□□□ -1.67
VPS9D1Q9Y2B5 SNRPGP10-201ENST00000432323 225 ntBASIC4.6□□□□□ -1.67
VPS9D1Q9Y2B5 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
VPS9D1Q9Y2B5 AL441985.1-201ENST00000457727 251 ntBASIC4.6□□□□□ -1.67
VPS9D1Q9Y2B5 RN7SL860P-201ENST00000473738 223 ntBASIC4.6□□□□□ -1.67
VPS9D1Q9Y2B5 RN7SKP282-201ENST00000516824 299 ntBASIC4.6□□□□□ -1.67
VPS9D1Q9Y2B5 AC011602.1-201ENST00000546484 331 ntBASIC4.6□□□□□ -1.67
VPS9D1Q9Y2B5 MIR376A2-201ENST00000636782 80 ntBASIC4.6□□□□□ -1.67
VPS9D1Q9Y2B5 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
VPS9D1Q9Y2B5 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
VPS9D1Q9Y2B5 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.59□□□□□ -1.67
VPS9D1Q9Y2B5 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
VPS9D1Q9Y2B5 Y_RNA.190-201ENST00000363964 101 ntBASIC4.59□□□□□ -1.67
VPS9D1Q9Y2B5 RNU6-652P-201ENST00000365488 107 ntBASIC4.59□□□□□ -1.67
VPS9D1Q9Y2B5 Y_RNA.507-201ENST00000384500 99 ntBASIC4.59□□□□□ -1.67
VPS9D1Q9Y2B5 MIR298-201ENST00000401212 88 ntBASIC4.59□□□□□ -1.67
VPS9D1Q9Y2B5 AL592437.2-201ENST00000421655 2434 ntBASIC4.59□□□□□ -1.67
VPS9D1Q9Y2B5 RNU2-11P-201ENST00000459191 187 ntBASIC4.59□□□□□ -1.67
VPS9D1Q9Y2B5 RN7SL41P-201ENST00000476144 297 ntBASIC4.59□□□□□ -1.67
VPS9D1Q9Y2B5 RPS27P22-201ENST00000478056 241 ntBASIC4.59□□□□□ -1.67
VPS9D1Q9Y2B5 NDUFA4P2-201ENST00000489989 244 ntBASIC4.59□□□□□ -1.67
VPS9D1Q9Y2B5 RNU7-123P-201ENST00000515911 60 ntBASIC4.59□□□□□ -1.67
VPS9D1Q9Y2B5 Y_RNA.666-201ENST00000516187 112 ntBASIC4.59□□□□□ -1.67
VPS9D1Q9Y2B5 RNU6-928P-201ENST00000516876 104 ntBASIC4.59□□□□□ -1.67
VPS9D1Q9Y2B5 AC022523.2-201ENST00000561045 150 ntBASIC4.59□□□□□ -1.67
VPS9D1Q9Y2B5 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.59□□□□□ -1.67
VPS9D1Q9Y2B5 MIR4694-201ENST00000578534 80 ntBASIC4.59□□□□□ -1.67
VPS9D1Q9Y2B5 AC012493.2-201ENST00000595083 291 ntBASIC4.59□□□□□ -1.67
VPS9D1Q9Y2B5 AC091152.3-201ENST00000604227 325 ntBASIC4.59□□□□□ -1.67
VPS9D1Q9Y2B5 MIR6820-201ENST00000611508 62 ntBASIC4.59□□□□□ -1.67
VPS9D1Q9Y2B5 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.59□□□□□ -1.67
VPS9D1Q9Y2B5 LINC00901.1-201ENST00000617252 152 ntBASIC4.59□□□□□ -1.67
VPS9D1Q9Y2B5 MIR6853-201ENST00000619642 74 ntBASIC4.59□□□□□ -1.67
VPS9D1Q9Y2B5 AL592182.3-201ENST00000642132 3304 ntBASIC4.59□□□□□ -1.67
VPS9D1Q9Y2B5 AC068254.2-201ENST00000623938 3577 ntBASIC4.59□□□□□ -1.68
VPS9D1Q9Y2B5 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC4.59□□□□□ -1.68
VPS9D1Q9Y2B5 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.59□□□□□ -1.68
VPS9D1Q9Y2B5 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
VPS9D1Q9Y2B5 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
VPS9D1Q9Y2B5 AC025031.4-201ENST00000621248 3271 ntBASIC4.58□□□□□ -1.68
VPS9D1Q9Y2B5 OR14L1P-202ENST00000641545 3009 ntBASIC4.58□□□□□ -1.68
VPS9D1Q9Y2B5 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
VPS9D1Q9Y2B5 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
VPS9D1Q9Y2B5 RNA5SP191-201ENST00000362585 102 ntBASIC4.58□□□□□ -1.68
VPS9D1Q9Y2B5 MIR548A2-201ENST00000384956 97 ntBASIC4.58□□□□□ -1.68
VPS9D1Q9Y2B5 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.58□□□□□ -1.68
VPS9D1Q9Y2B5 VDAC1P3-201ENST00000434069 851 ntBASIC4.58□□□□□ -1.68
VPS9D1Q9Y2B5 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.58□□□□□ -1.68
VPS9D1Q9Y2B5 SCARNA10-201ENST00000459255 330 ntBASIC4.58□□□□□ -1.68
VPS9D1Q9Y2B5 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
VPS9D1Q9Y2B5 RNU7-6P-201ENST00000516845 62 ntBASIC4.58□□□□□ -1.68
VPS9D1Q9Y2B5 AC068657.1-201ENST00000520807 306 ntBASIC4.58□□□□□ -1.68
VPS9D1Q9Y2B5 AC209154.1-201ENST00000582156 337 ntBASIC4.58□□□□□ -1.68
VPS9D1Q9Y2B5 uc_338.18-201ENST00000615451 175 ntBASIC4.58□□□□□ -1.68
VPS9D1Q9Y2B5 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
VPS9D1Q9Y2B5 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.58□□□□□ -1.68
VPS9D1Q9Y2B5 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms