Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 AC073410.2-201ENST00000603240 332 ntBASIC2.19□□□□□ -2.06
CLIP2Q9UDT6 AL670379.4-201ENST00000605279 254 ntBASIC2.19□□□□□ -2.06
CLIP2Q9UDT6 PART1_1.1-201ENST00000611761 217 ntBASIC2.19□□□□□ -2.06
CLIP2Q9UDT6 AC040896.1-201ENST00000613819 479 ntBASIC2.19□□□□□ -2.06
CLIP2Q9UDT6 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.19□□□□□ -2.06
CLIP2Q9UDT6 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
CLIP2Q9UDT6 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.19□□□□□ -2.06
CLIP2Q9UDT6 AC008555.8-201ENST00000623602 2168 ntBASIC2.18□□□□□ -2.06
CLIP2Q9UDT6 Y_RNA.100-201ENST00000363141 102 ntBASIC2.18□□□□□ -2.06
CLIP2Q9UDT6 SNORA63-201ENST00000363450 132 ntBASIC2.18□□□□□ -2.06
CLIP2Q9UDT6 Y_RNA.259-201ENST00000364619 101 ntBASIC2.18□□□□□ -2.06
CLIP2Q9UDT6 Y_RNA.339-201ENST00000365325 102 ntBASIC2.18□□□□□ -2.06
CLIP2Q9UDT6 RNU6-43P-201ENST00000384302 107 ntBASIC2.18□□□□□ -2.06
CLIP2Q9UDT6 MIR1302-11-201ENST00000408051 138 ntBASIC2.18□□□□□ -2.06
CLIP2Q9UDT6 MIR1302-9-201ENST00000408365 138 ntBASIC2.18□□□□□ -2.06
CLIP2Q9UDT6 MIR548F5-201ENST00000408421 86 ntBASIC2.18□□□□□ -2.06
CLIP2Q9UDT6 MIR1302-10-201ENST00000408734 138 ntBASIC2.18□□□□□ -2.06
CLIP2Q9UDT6 OR6C66P-201ENST00000414917 930 ntBASIC2.18□□□□□ -2.06
CLIP2Q9UDT6 RPL21P90-201ENST00000415692 466 ntBASIC2.18□□□□□ -2.06
CLIP2Q9UDT6 EDDM3CP-201ENST00000415977 425 ntBASIC2.18□□□□□ -2.06
CLIP2Q9UDT6 AC008267.5-201ENST00000424928 265 ntBASIC2.18□□□□□ -2.06
CLIP2Q9UDT6 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC2.18□□□□□ -2.06
CLIP2Q9UDT6 AC012308.1-201ENST00000451232 178 ntBASIC2.18□□□□□ -2.06
CLIP2Q9UDT6 AP001025.1-201ENST00000486139 332 ntBASIC2.18□□□□□ -2.06
CLIP2Q9UDT6 TRBVA-201ENST00000498804 316 ntBASIC2.18□□□□□ -2.06
CLIP2Q9UDT6 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.18□□□□□ -2.06
CLIP2Q9UDT6 Y_RNA.682-201ENST00000516457 100 ntBASIC2.18□□□□□ -2.06
CLIP2Q9UDT6 RNU6-1213P-201ENST00000517075 94 ntBASIC2.18□□□□□ -2.06
CLIP2Q9UDT6 SNORA31.23-201ENST00000517219 133 ntBASIC2.18□□□□□ -2.06
CLIP2Q9UDT6 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2.18□□□□□ -2.06
CLIP2Q9UDT6 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC2.18□□□□□ -2.06
CLIP2Q9UDT6 MIR3171-201ENST00000584270 74 ntBASIC2.18□□□□□ -2.06
CLIP2Q9UDT6 MIR1302-2-201ENST00000607096 138 ntBASIC2.18□□□□□ -2.06
CLIP2Q9UDT6 AC092807.2-201ENST00000609367 243 ntBASIC2.18□□□□□ -2.06
CLIP2Q9UDT6 AC008121.3-201ENST00000618726 433 ntBASIC2.18□□□□□ -2.06
CLIP2Q9UDT6 AL353997.5-201ENST00000618886 171 ntBASIC2.18□□□□□ -2.06
CLIP2Q9UDT6 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.18□□□□□ -2.06
CLIP2Q9UDT6 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
CLIP2Q9UDT6 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
CLIP2Q9UDT6 SNORA63C-201ENST00000364578 129 ntBASIC2.17□□□□□ -2.06
CLIP2Q9UDT6 SNORD42.2-201ENST00000365570 69 ntBASIC2.17□□□□□ -2.06
CLIP2Q9UDT6 Y_RNA.473-201ENST00000384333 102 ntBASIC2.17□□□□□ -2.06
CLIP2Q9UDT6 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
CLIP2Q9UDT6 AL590004.1-201ENST00000405321 300 ntBASIC2.17□□□□□ -2.06
CLIP2Q9UDT6 AL606923.1-201ENST00000406616 190 ntBASIC2.17□□□□□ -2.06
CLIP2Q9UDT6 RNA5SP390-201ENST00000410191 113 ntBASIC2.17□□□□□ -2.06
CLIP2Q9UDT6 AC138623.1-201ENST00000418060 216 ntBASIC2.17□□□□□ -2.06
CLIP2Q9UDT6 HMGN2P19-201ENST00000425149 265 ntBASIC2.17□□□□□ -2.06
CLIP2Q9UDT6 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC2.17□□□□□ -2.06
CLIP2Q9UDT6 AC007547.1-201ENST00000462177 490 ntBASIC2.17□□□□□ -2.06
CLIP2Q9UDT6 AC104564.1-201ENST00000493028 407 ntBASIC2.17□□□□□ -2.06
CLIP2Q9UDT6 AC104806.1-201ENST00000508720 308 ntBASIC2.17□□□□□ -2.06
CLIP2Q9UDT6 RNU6-327P-201ENST00000516270 127 ntBASIC2.17□□□□□ -2.06
CLIP2Q9UDT6 RNU6-1046P-201ENST00000516538 107 ntBASIC2.17□□□□□ -2.06
CLIP2Q9UDT6 SNORA43.2-201ENST00000516652 128 ntBASIC2.17□□□□□ -2.06
CLIP2Q9UDT6 RN7SKP256-201ENST00000517201 314 ntBASIC2.17□□□□□ -2.06
CLIP2Q9UDT6 COPS8P3-201ENST00000526024 482 ntBASIC2.17□□□□□ -2.06
CLIP2Q9UDT6 APOOP3-201ENST00000536787 586 ntBASIC2.17□□□□□ -2.06
CLIP2Q9UDT6 AL109918.3-201ENST00000603072 338 ntBASIC2.17□□□□□ -2.06
CLIP2Q9UDT6 AC113139.1-201ENST00000605049 239 ntBASIC2.17□□□□□ -2.06
CLIP2Q9UDT6 AC124303.1-201ENST00000605703 360 ntBASIC2.17□□□□□ -2.06
CLIP2Q9UDT6 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
CLIP2Q9UDT6 AC093913.1-201ENST00000614178 329 ntBASIC2.17□□□□□ -2.06
CLIP2Q9UDT6 AC005296.1-201ENST00000616145 209 ntBASIC2.17□□□□□ -2.06
CLIP2Q9UDT6 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.17□□□□□ -2.06
CLIP2Q9UDT6 AC009487.4-201ENST00000624969 3585 ntBASIC2.17□□□□□ -2.06
CLIP2Q9UDT6 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
CLIP2Q9UDT6 SNORD116-20-201ENST00000384529 92 ntBASIC2.16□□□□□ -2.06
CLIP2Q9UDT6 MIR186-201ENST00000384988 86 ntBASIC2.16□□□□□ -2.06
CLIP2Q9UDT6 MIR9-3-201ENST00000385084 90 ntBASIC2.16□□□□□ -2.06
CLIP2Q9UDT6 MIR561-201ENST00000385216 97 ntBASIC2.16□□□□□ -2.06
CLIP2Q9UDT6 RNA5SP213-201ENST00000391031 106 ntBASIC2.16□□□□□ -2.06
CLIP2Q9UDT6 RNU6-607P-201ENST00000411283 108 ntBASIC2.16□□□□□ -2.06
CLIP2Q9UDT6 AC074117.2-201ENST00000417130 397 ntBASIC2.16□□□□□ -2.06
CLIP2Q9UDT6 Z82205.1-201ENST00000428456 297 ntBASIC2.16□□□□□ -2.06
CLIP2Q9UDT6 TRAPPC2P3-201ENST00000443200 321 ntBASIC2.16□□□□□ -2.06
CLIP2Q9UDT6 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC2.16□□□□□ -2.06
CLIP2Q9UDT6 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.16□□□□□ -2.06
CLIP2Q9UDT6 RNU7-182P-201ENST00000459009 62 ntBASIC2.16□□□□□ -2.06
CLIP2Q9UDT6 AC027575.1-201ENST00000481064 460 ntBASIC2.16□□□□□ -2.06
CLIP2Q9UDT6 RPS29P11-201ENST00000496507 171 ntBASIC2.16□□□□□ -2.06
CLIP2Q9UDT6 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC2.16□□□□□ -2.06
CLIP2Q9UDT6 HMGB3P17-201ENST00000504195 649 ntBASIC2.16□□□□□ -2.06
CLIP2Q9UDT6 AC104136.1-201ENST00000512969 394 ntBASIC2.16□□□□□ -2.06
CLIP2Q9UDT6 AC105417.1-201ENST00000514691 285 ntBASIC2.16□□□□□ -2.06
CLIP2Q9UDT6 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC2.16□□□□□ -2.06
CLIP2Q9UDT6 RNU6-559P-201ENST00000516151 98 ntBASIC2.16□□□□□ -2.06
CLIP2Q9UDT6 RNA5SP137-201ENST00000516833 135 ntBASIC2.16□□□□□ -2.06
CLIP2Q9UDT6 RNA5SP503-201ENST00000517047 117 ntBASIC2.16□□□□□ -2.06
CLIP2Q9UDT6 Y_RNA.718-201ENST00000517110 102 ntBASIC2.16□□□□□ -2.06
CLIP2Q9UDT6 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC2.16□□□□□ -2.06
CLIP2Q9UDT6 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC2.16□□□□□ -2.06
CLIP2Q9UDT6 AC005668.1-201ENST00000571142 476 ntBASIC2.16□□□□□ -2.06
CLIP2Q9UDT6 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.16□□□□□ -2.06
CLIP2Q9UDT6 AC090897.2-201ENST00000581715 130 ntBASIC2.16□□□□□ -2.06
CLIP2Q9UDT6 MIR3672-201ENST00000584290 82 ntBASIC2.16□□□□□ -2.06
CLIP2Q9UDT6 RPL30P11-203ENST00000598995 310 ntBASIC2.16□□□□□ -2.06
CLIP2Q9UDT6 SNRPGP17-201ENST00000603780 214 ntBASIC2.16□□□□□ -2.06
CLIP2Q9UDT6 AL162730.1-201ENST00000605734 292 ntBASIC2.16□□□□□ -2.06
CLIP2Q9UDT6 Z82243.1-201ENST00000609432 473 ntBASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms