Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 RPL9P9-202ENST00000466501 579 ntBASIC1.48□□□□□ -2.17
CLCF1Q9UBD9 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC1.48□□□□□ -2.17
CLCF1Q9UBD9 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.48□□□□□ -2.17
CLCF1Q9UBD9 SEPT14P4-201ENST00000513445 186 ntBASIC1.48□□□□□ -2.17
CLCF1Q9UBD9 FO082796.1-201ENST00000523795 183 ntBASIC1.48□□□□□ -2.17
CLCF1Q9UBD9 GNAI2P1-201ENST00000541815 315 ntBASIC1.48□□□□□ -2.17
CLCF1Q9UBD9 AC016256.1-201ENST00000547971 354 ntBASIC1.48□□□□□ -2.17
CLCF1Q9UBD9 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.48□□□□□ -2.17
CLCF1Q9UBD9 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.48□□□□□ -2.17
CLCF1Q9UBD9 AL162413.1-201ENST00000603198 110 ntBASIC1.48□□□□□ -2.17
CLCF1Q9UBD9 AC064807.4-201ENST00000607201 407 ntBASIC1.48□□□□□ -2.17
CLCF1Q9UBD9 AC064836.2-201ENST00000609491 462 ntBASIC1.48□□□□□ -2.17
CLCF1Q9UBD9 AC130454.1-201ENST00000622948 401 ntBASIC1.48□□□□□ -2.17
CLCF1Q9UBD9 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.48□□□□□ -2.17
CLCF1Q9UBD9 SNORA43.4-201ENST00000629559 138 ntBASIC1.48□□□□□ -2.17
CLCF1Q9UBD9 AC068137.3-201ENST00000639191 341 ntBASIC1.48□□□□□ -2.17
CLCF1Q9UBD9 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
CLCF1Q9UBD9 Y_RNA.140-201ENST00000363474 103 ntBASIC1.47□□□□□ -2.17
CLCF1Q9UBD9 Y_RNA.231-201ENST00000364358 102 ntBASIC1.47□□□□□ -2.17
CLCF1Q9UBD9 SNORD48-201ENST00000364953 64 ntBASIC1.47□□□□□ -2.17
CLCF1Q9UBD9 Y_RNA.332-201ENST00000365271 113 ntBASIC1.47□□□□□ -2.17
CLCF1Q9UBD9 RNU6-378P-201ENST00000384324 107 ntBASIC1.47□□□□□ -2.17
CLCF1Q9UBD9 SNORA8-201ENST00000384574 139 ntBASIC1.47□□□□□ -2.17
CLCF1Q9UBD9 MIR597-201ENST00000384968 97 ntBASIC1.47□□□□□ -2.17
CLCF1Q9UBD9 UBE2V1P4-201ENST00000425374 344 ntBASIC1.47□□□□□ -2.17
CLCF1Q9UBD9 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC1.47□□□□□ -2.17
CLCF1Q9UBD9 AC108667.1-201ENST00000428618 249 ntBASIC1.47□□□□□ -2.17
CLCF1Q9UBD9 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.47□□□□□ -2.17
CLCF1Q9UBD9 AC105313.1-201ENST00000509121 353 ntBASIC1.47□□□□□ -2.17
CLCF1Q9UBD9 RPL39P5-202ENST00000512505 151 ntBASIC1.47□□□□□ -2.17
CLCF1Q9UBD9 AC025465.4-201ENST00000513422 638 ntBASIC1.47□□□□□ -2.17
CLCF1Q9UBD9 RNU6-1281P-201ENST00000516223 105 ntBASIC1.47□□□□□ -2.17
CLCF1Q9UBD9 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC1.47□□□□□ -2.17
CLCF1Q9UBD9 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.47□□□□□ -2.17
CLCF1Q9UBD9 AL157687.1-201ENST00000554853 619 ntBASIC1.47□□□□□ -2.17
CLCF1Q9UBD9 AC245505.1-201ENST00000556398 224 ntBASIC1.47□□□□□ -2.17
CLCF1Q9UBD9 HMGB1P33-201ENST00000563485 527 ntBASIC1.47□□□□□ -2.17
CLCF1Q9UBD9 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.47□□□□□ -2.17
CLCF1Q9UBD9 RPL17P51-201ENST00000605218 238 ntBASIC1.47□□□□□ -2.17
CLCF1Q9UBD9 AC080013.6-201ENST00000606185 215 ntBASIC1.47□□□□□ -2.17
CLCF1Q9UBD9 AC005520.5-201ENST00000613926 164 ntBASIC1.47□□□□□ -2.17
CLCF1Q9UBD9 AC005296.1-201ENST00000616145 209 ntBASIC1.47□□□□□ -2.17
CLCF1Q9UBD9 AC121333.1-201ENST00000567488 2709 ntBASIC1.47□□□□□ -2.17
CLCF1Q9UBD9 OR4G1P-203ENST00000641984 1631 ntBASIC1.47□□□□□ -2.17
CLCF1Q9UBD9 RNU6-23P-201ENST00000363283 107 ntBASIC1.46□□□□□ -2.18
CLCF1Q9UBD9 RNU6-438P-201ENST00000365561 103 ntBASIC1.46□□□□□ -2.18
CLCF1Q9UBD9 SNORA36A-201ENST00000384221 132 ntBASIC1.46□□□□□ -2.18
CLCF1Q9UBD9 U8.10-201ENST00000384260 133 ntBASIC1.46□□□□□ -2.18
CLCF1Q9UBD9 Y_RNA.517-201ENST00000384551 106 ntBASIC1.46□□□□□ -2.18
CLCF1Q9UBD9 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
CLCF1Q9UBD9 MIR208B-201ENST00000401172 77 ntBASIC1.46□□□□□ -2.18
CLCF1Q9UBD9 AL356432.1-201ENST00000405809 419 ntBASIC1.46□□□□□ -2.18
CLCF1Q9UBD9 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.46□□□□□ -2.18
CLCF1Q9UBD9 RNU6-1068P-201ENST00000410958 103 ntBASIC1.46□□□□□ -2.18
CLCF1Q9UBD9 MTCO3P41-201ENST00000414801 328 ntBASIC1.46□□□□□ -2.18
CLCF1Q9UBD9 EIF4EP2-201ENST00000422816 654 ntBASIC1.46□□□□□ -2.18
CLCF1Q9UBD9 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.46□□□□□ -2.18
CLCF1Q9UBD9 MRPS10P2-201ENST00000431226 381 ntBASIC1.46□□□□□ -2.18
CLCF1Q9UBD9 ERLEC1P1-201ENST00000433806 578 ntBASIC1.46□□□□□ -2.18
CLCF1Q9UBD9 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.46□□□□□ -2.18
CLCF1Q9UBD9 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.46□□□□□ -2.18
CLCF1Q9UBD9 AL035666.1-201ENST00000446195 348 ntBASIC1.46□□□□□ -2.18
CLCF1Q9UBD9 AC007547.1-201ENST00000462177 490 ntBASIC1.46□□□□□ -2.18
CLCF1Q9UBD9 AC104576.1-201ENST00000524225 88 ntBASIC1.46□□□□□ -2.18
CLCF1Q9UBD9 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.46□□□□□ -2.18
CLCF1Q9UBD9 AC087441.2-201ENST00000529141 262 ntBASIC1.46□□□□□ -2.18
CLCF1Q9UBD9 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.46□□□□□ -2.18
CLCF1Q9UBD9 SCOCP1-201ENST00000554676 349 ntBASIC1.46□□□□□ -2.18
CLCF1Q9UBD9 AC024614.2-201ENST00000577584 372 ntBASIC1.46□□□□□ -2.18
CLCF1Q9UBD9 AC100830.2-201ENST00000581636 240 ntBASIC1.46□□□□□ -2.18
CLCF1Q9UBD9 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.46□□□□□ -2.18
CLCF1Q9UBD9 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.46□□□□□ -2.18
CLCF1Q9UBD9 RNU6-89P-201ENST00000606519 100 ntBASIC1.46□□□□□ -2.18
CLCF1Q9UBD9 AC004492.1-201ENST00000607036 742 ntBASIC1.46□□□□□ -2.18
CLCF1Q9UBD9 DISC2.1-201ENST00000612827 205 ntBASIC1.46□□□□□ -2.18
CLCF1Q9UBD9 RNU6-661P-201ENST00000362409 107 ntBASIC1.45□□□□□ -2.18
CLCF1Q9UBD9 RNU6-1317P-201ENST00000364582 104 ntBASIC1.45□□□□□ -2.18
CLCF1Q9UBD9 RNU6-483P-201ENST00000384088 108 ntBASIC1.45□□□□□ -2.18
CLCF1Q9UBD9 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
CLCF1Q9UBD9 RNA5SP501-201ENST00000410990 112 ntBASIC1.45□□□□□ -2.18
CLCF1Q9UBD9 RNU2-41P-201ENST00000410991 178 ntBASIC1.45□□□□□ -2.18
CLCF1Q9UBD9 AC123900.1-201ENST00000420390 96 ntBASIC1.45□□□□□ -2.18
CLCF1Q9UBD9 MTND3P9-201ENST00000429526 346 ntBASIC1.45□□□□□ -2.18
CLCF1Q9UBD9 MTND3P21-201ENST00000433774 331 ntBASIC1.45□□□□□ -2.18
CLCF1Q9UBD9 PPP1R2P5-201ENST00000457256 603 ntBASIC1.45□□□□□ -2.18
CLCF1Q9UBD9 RPS29P27-201ENST00000463711 170 ntBASIC1.45□□□□□ -2.18
CLCF1Q9UBD9 AC021146.2-201ENST00000504736 556 ntBASIC1.45□□□□□ -2.18
CLCF1Q9UBD9 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.45□□□□□ -2.18
CLCF1Q9UBD9 AP005639.2-201ENST00000527592 928 ntBASIC1.45□□□□□ -2.18
CLCF1Q9UBD9 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.45□□□□□ -2.18
CLCF1Q9UBD9 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.45□□□□□ -2.18
CLCF1Q9UBD9 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.45□□□□□ -2.18
CLCF1Q9UBD9 AC010928.2-201ENST00000588017 287 ntBASIC1.45□□□□□ -2.18
CLCF1Q9UBD9 BNIP3P25-201ENST00000596023 559 ntBASIC1.45□□□□□ -2.18
CLCF1Q9UBD9 AC009994.1-201ENST00000606889 253 ntBASIC1.45□□□□□ -2.18
CLCF1Q9UBD9 AC092954.2-201ENST00000609103 430 ntBASIC1.45□□□□□ -2.18
CLCF1Q9UBD9 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.45□□□□□ -2.18
CLCF1Q9UBD9 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.44□□□□□ -2.18
CLCF1Q9UBD9 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
CLCF1Q9UBD9 Y_RNA.167-201ENST00000363735 109 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 179.3 ms