Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
COL20A1Q9P218 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.9□□□□□ -1.95
COL20A1Q9P218 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.9□□□□□ -1.95
COL20A1Q9P218 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
COL20A1Q9P218 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
COL20A1Q9P218 Y_RNA.202-201ENST00000364083 110 ntBASIC2.89□□□□□ -1.95
COL20A1Q9P218 Y_RNA.326-201ENST00000365176 113 ntBASIC2.89□□□□□ -1.95
COL20A1Q9P218 RNU6-17P-201ENST00000384245 107 ntBASIC2.89□□□□□ -1.95
COL20A1Q9P218 RNU6-18P-201ENST00000384527 107 ntBASIC2.89□□□□□ -1.95
COL20A1Q9P218 RNA5SP210-201ENST00000391034 120 ntBASIC2.89□□□□□ -1.95
COL20A1Q9P218 MIR208B-201ENST00000401172 77 ntBASIC2.89□□□□□ -1.95
COL20A1Q9P218 AL590004.1-201ENST00000405321 300 ntBASIC2.89□□□□□ -1.95
COL20A1Q9P218 MTCO3P29-201ENST00000432119 779 ntBASIC2.89□□□□□ -1.95
COL20A1Q9P218 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.89□□□□□ -1.95
COL20A1Q9P218 EEF1B2P7-201ENST00000451177 676 ntBASIC2.89□□□□□ -1.95
COL20A1Q9P218 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.89□□□□□ -1.95
COL20A1Q9P218 RPL23AP70-201ENST00000483361 460 ntBASIC2.89□□□□□ -1.95
COL20A1Q9P218 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.89□□□□□ -1.95
COL20A1Q9P218 AL449363.1-201ENST00000617815 186 ntBASIC2.89□□□□□ -1.95
COL20A1Q9P218 AL138825.1-201ENST00000618587 192 ntBASIC2.89□□□□□ -1.95
COL20A1Q9P218 AC008121.3-201ENST00000618726 433 ntBASIC2.89□□□□□ -1.95
COL20A1Q9P218 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.89□□□□□ -1.95
COL20A1Q9P218 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.89□□□□□ -1.95
COL20A1Q9P218 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.89□□□□□ -1.95
COL20A1Q9P218 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
COL20A1Q9P218 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.88□□□□□ -1.95
COL20A1Q9P218 RNU6-461P-201ENST00000364195 107 ntBASIC2.88□□□□□ -1.95
COL20A1Q9P218 AC117470.1-201ENST00000381974 330 ntBASIC2.88□□□□□ -1.95
COL20A1Q9P218 RNU6-541P-201ENST00000384709 110 ntBASIC2.88□□□□□ -1.95
COL20A1Q9P218 MIR627-201ENST00000384979 97 ntBASIC2.88□□□□□ -1.95
COL20A1Q9P218 HMGB3P2-201ENST00000411913 584 ntBASIC2.88□□□□□ -1.95
COL20A1Q9P218 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.88□□□□□ -1.95
COL20A1Q9P218 Z96811.1-201ENST00000445880 108 ntBASIC2.88□□□□□ -1.95
COL20A1Q9P218 CYP2C59P-201ENST00000457790 269 ntBASIC2.88□□□□□ -1.95
COL20A1Q9P218 snoU13.6-201ENST00000458785 104 ntBASIC2.88□□□□□ -1.95
COL20A1Q9P218 AC105758.1-201ENST00000506038 399 ntBASIC2.88□□□□□ -1.95
COL20A1Q9P218 RNA5SP54-201ENST00000516951 92 ntBASIC2.88□□□□□ -1.95
COL20A1Q9P218 RN7SKP295-201ENST00000517264 153 ntBASIC2.88□□□□□ -1.95
COL20A1Q9P218 AP003072.1-201ENST00000531740 145 ntBASIC2.88□□□□□ -1.95
COL20A1Q9P218 ELOCP31-201ENST00000540463 467 ntBASIC2.88□□□□□ -1.95
COL20A1Q9P218 ANP32BP3-201ENST00000559213 706 ntBASIC2.88□□□□□ -1.95
COL20A1Q9P218 MIR3945-201ENST00000581853 98 ntBASIC2.88□□□□□ -1.95
COL20A1Q9P218 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC2.88□□□□□ -1.95
COL20A1Q9P218 AL355802.3-201ENST00000607571 545 ntBASIC2.88□□□□□ -1.95
COL20A1Q9P218 AC091925.1-201ENST00000623204 462 ntBASIC2.88□□□□□ -1.95
COL20A1Q9P218 AC090517.3-201ENST00000625170 141 ntBASIC2.88□□□□□ -1.95
COL20A1Q9P218 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
COL20A1Q9P218 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.87□□□□□ -1.95
COL20A1Q9P218 snoU2_19.1-201ENST00000362361 80 ntBASIC2.87□□□□□ -1.95
COL20A1Q9P218 Y_RNA.28-201ENST00000362554 111 ntBASIC2.87□□□□□ -1.95
COL20A1Q9P218 RNU4-15P-201ENST00000362613 141 ntBASIC2.87□□□□□ -1.95
COL20A1Q9P218 U3.9-201ENST00000363823 204 ntBASIC2.87□□□□□ -1.95
COL20A1Q9P218 RNA5SP240-201ENST00000365355 128 ntBASIC2.87□□□□□ -1.95
COL20A1Q9P218 Y_RNA.364-201ENST00000365532 101 ntBASIC2.87□□□□□ -1.95
COL20A1Q9P218 SNORA69.1-201ENST00000390904 137 ntBASIC2.87□□□□□ -1.95
COL20A1Q9P218 MIR320B2-201ENST00000408479 138 ntBASIC2.87□□□□□ -1.95
COL20A1Q9P218 RNA5SP201-201ENST00000410316 124 ntBASIC2.87□□□□□ -1.95
COL20A1Q9P218 Y_RNA.605-201ENST00000410577 105 ntBASIC2.87□□□□□ -1.95
COL20A1Q9P218 PMCHL1-202ENST00000423102 261 ntBASIC2.87□□□□□ -1.95
COL20A1Q9P218 MRPS18CP6-201ENST00000423587 223 ntBASIC2.87□□□□□ -1.95
COL20A1Q9P218 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.87□□□□□ -1.95
COL20A1Q9P218 AC104332.2-201ENST00000429959 156 ntBASIC2.87□□□□□ -1.95
COL20A1Q9P218 AL353752.1-201ENST00000454946 260 ntBASIC2.87□□□□□ -1.95
COL20A1Q9P218 AL163540.1-201ENST00000485382 386 ntBASIC2.87□□□□□ -1.95
COL20A1Q9P218 AC145146.1-201ENST00000496370 254 ntBASIC2.87□□□□□ -1.95
COL20A1Q9P218 CKS1BP2-201ENST00000497342 240 ntBASIC2.87□□□□□ -1.95
COL20A1Q9P218 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2.87□□□□□ -1.95
COL20A1Q9P218 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.87□□□□□ -1.95
COL20A1Q9P218 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.87□□□□□ -1.95
COL20A1Q9P218 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.87□□□□□ -1.95
COL20A1Q9P218 MIR3117-201ENST00000584034 78 ntBASIC2.87□□□□□ -1.95
COL20A1Q9P218 AL356280.1-201ENST00000603614 379 ntBASIC2.87□□□□□ -1.95
COL20A1Q9P218 MIR1244-1-201ENST00000612829 85 ntBASIC2.87□□□□□ -1.95
COL20A1Q9P218 AC083806.3-201ENST00000614016 455 ntBASIC2.87□□□□□ -1.95
COL20A1Q9P218 U4.3-201ENST00000621047 82 ntBASIC2.87□□□□□ -1.95
COL20A1Q9P218 MIR1244-3-201ENST00000635744 85 ntBASIC2.87□□□□□ -1.95
COL20A1Q9P218 MIR1244-2-201ENST00000636449 85 ntBASIC2.87□□□□□ -1.95
COL20A1Q9P218 MIR1244-4-202ENST00000636813 85 ntBASIC2.87□□□□□ -1.95
COL20A1Q9P218 AL161431.1-201ENST00000618966 4205 ntBASIC2.87□□□□□ -1.95
COL20A1Q9P218 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.87□□□□□ -1.95
COL20A1Q9P218 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
COL20A1Q9P218 AC007336.1-201ENST00000576365 3828 ntBASIC2.87□□□□□ -1.95
COL20A1Q9P218 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
COL20A1Q9P218 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.86□□□□□ -1.95
COL20A1Q9P218 Y_RNA.39-201ENST00000362620 98 ntBASIC2.86□□□□□ -1.95
COL20A1Q9P218 RNU5F-3P-201ENST00000363767 117 ntBASIC2.86□□□□□ -1.95
COL20A1Q9P218 U8.9-201ENST00000365667 134 ntBASIC2.86□□□□□ -1.95
COL20A1Q9P218 RNU6-1093P-201ENST00000391194 107 ntBASIC2.86□□□□□ -1.95
COL20A1Q9P218 TOMM22P6-201ENST00000465035 409 ntBASIC2.86□□□□□ -1.95
COL20A1Q9P218 RN7SL499P-201ENST00000481141 276 ntBASIC2.86□□□□□ -1.95
COL20A1Q9P218 RN7SL297P-201ENST00000483161 293 ntBASIC2.86□□□□□ -1.95
COL20A1Q9P218 AC008413.1-201ENST00000511864 177 ntBASIC2.86□□□□□ -1.95
COL20A1Q9P218 SNORA25.10-201ENST00000515926 124 ntBASIC2.86□□□□□ -1.95
COL20A1Q9P218 RNA5SP76-201ENST00000516277 87 ntBASIC2.86□□□□□ -1.95
COL20A1Q9P218 MIR2355-201ENST00000517199 87 ntBASIC2.86□□□□□ -1.95
COL20A1Q9P218 RNU6-586P-201ENST00000517265 104 ntBASIC2.86□□□□□ -1.95
COL20A1Q9P218 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.86□□□□□ -1.95
COL20A1Q9P218 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.86□□□□□ -1.95
COL20A1Q9P218 AL356575.1-201ENST00000603008 283 ntBASIC2.86□□□□□ -1.95
COL20A1Q9P218 AC092447.9-201ENST00000603395 144 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms