Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 RNU6-784P-201ENST00000384330 106 ntBASIC2.72□□□□□ -1.97
NCKIPSDQ9NZQ3 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
NCKIPSDQ9NZQ3 RNU6-1140P-201ENST00000410517 106 ntBASIC2.72□□□□□ -1.97
NCKIPSDQ9NZQ3 RNU2-23P-201ENST00000410545 195 ntBASIC2.72□□□□□ -1.97
NCKIPSDQ9NZQ3 AP000275.1-201ENST00000411943 390 ntBASIC2.72□□□□□ -1.97
NCKIPSDQ9NZQ3 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.72□□□□□ -1.97
NCKIPSDQ9NZQ3 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.72□□□□□ -1.97
NCKIPSDQ9NZQ3 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.72□□□□□ -1.97
NCKIPSDQ9NZQ3 EEF1B2P7-201ENST00000451177 676 ntBASIC2.72□□□□□ -1.97
NCKIPSDQ9NZQ3 AC090525.1-201ENST00000479116 478 ntBASIC2.72□□□□□ -1.97
NCKIPSDQ9NZQ3 RPL23AP70-201ENST00000483361 460 ntBASIC2.72□□□□□ -1.97
NCKIPSDQ9NZQ3 AP001025.1-201ENST00000486139 332 ntBASIC2.72□□□□□ -1.97
NCKIPSDQ9NZQ3 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.72□□□□□ -1.97
NCKIPSDQ9NZQ3 MIR3199-1-201ENST00000582434 88 ntBASIC2.72□□□□□ -1.97
NCKIPSDQ9NZQ3 AL138825.1-201ENST00000618587 192 ntBASIC2.72□□□□□ -1.97
NCKIPSDQ9NZQ3 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.72□□□□□ -1.97
NCKIPSDQ9NZQ3 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.71□□□□□ -1.97
NCKIPSDQ9NZQ3 RNU6-874P-201ENST00000362390 105 ntBASIC2.71□□□□□ -1.98
NCKIPSDQ9NZQ3 RNU4-82P-201ENST00000362443 140 ntBASIC2.71□□□□□ -1.98
NCKIPSDQ9NZQ3 RNU6-486P-201ENST00000363116 107 ntBASIC2.71□□□□□ -1.98
NCKIPSDQ9NZQ3 RNU6-702P-201ENST00000364982 107 ntBASIC2.71□□□□□ -1.98
NCKIPSDQ9NZQ3 Y_RNA.556-201ENST00000384677 113 ntBASIC2.71□□□□□ -1.98
NCKIPSDQ9NZQ3 Y_RNA.577-201ENST00000384794 101 ntBASIC2.71□□□□□ -1.98
NCKIPSDQ9NZQ3 MIR544A-201ENST00000384855 91 ntBASIC2.71□□□□□ -1.98
NCKIPSDQ9NZQ3 MIR218-1-201ENST00000384999 110 ntBASIC2.71□□□□□ -1.98
NCKIPSDQ9NZQ3 RNA5SP390-201ENST00000410191 113 ntBASIC2.71□□□□□ -1.98
NCKIPSDQ9NZQ3 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.71□□□□□ -1.98
NCKIPSDQ9NZQ3 AC114482.1-201ENST00000418010 247 ntBASIC2.71□□□□□ -1.98
NCKIPSDQ9NZQ3 AC097463.2-201ENST00000421074 142 ntBASIC2.71□□□□□ -1.98
NCKIPSDQ9NZQ3 ARL5AP4-201ENST00000430731 512 ntBASIC2.71□□□□□ -1.98
NCKIPSDQ9NZQ3 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.71□□□□□ -1.98
NCKIPSDQ9NZQ3 RPS15AP7-201ENST00000439294 405 ntBASIC2.71□□□□□ -1.98
NCKIPSDQ9NZQ3 MTATP8P1-201ENST00000467115 207 ntBASIC2.71□□□□□ -1.98
NCKIPSDQ9NZQ3 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.71□□□□□ -1.98
NCKIPSDQ9NZQ3 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.71□□□□□ -1.98
NCKIPSDQ9NZQ3 RNU6-794P-201ENST00000517261 64 ntBASIC2.71□□□□□ -1.98
NCKIPSDQ9NZQ3 AC113195.1-201ENST00000579952 141 ntBASIC2.71□□□□□ -1.98
NCKIPSDQ9NZQ3 AC090897.2-201ENST00000581715 130 ntBASIC2.71□□□□□ -1.98
NCKIPSDQ9NZQ3 MIR3668-201ENST00000582138 75 ntBASIC2.71□□□□□ -1.98
NCKIPSDQ9NZQ3 AC060766.3-201ENST00000591442 263 ntBASIC2.71□□□□□ -1.98
NCKIPSDQ9NZQ3 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.71□□□□□ -1.98
NCKIPSDQ9NZQ3 AC104695.3-201ENST00000604052 296 ntBASIC2.71□□□□□ -1.98
NCKIPSDQ9NZQ3 MIR1244-1-201ENST00000612829 85 ntBASIC2.71□□□□□ -1.98
NCKIPSDQ9NZQ3 AL606534.2-204ENST00000635008 178 ntBASIC2.71□□□□□ -1.98
NCKIPSDQ9NZQ3 MIR1244-3-201ENST00000635744 85 ntBASIC2.71□□□□□ -1.98
NCKIPSDQ9NZQ3 MIR1244-2-201ENST00000636449 85 ntBASIC2.71□□□□□ -1.98
NCKIPSDQ9NZQ3 MIR1244-4-202ENST00000636813 85 ntBASIC2.71□□□□□ -1.98
NCKIPSDQ9NZQ3 AC091812.1-201ENST00000432235 1948 ntBASIC2.7□□□□□ -1.98
NCKIPSDQ9NZQ3 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
NCKIPSDQ9NZQ3 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
NCKIPSDQ9NZQ3 Y_RNA.152-201ENST00000363578 100 ntBASIC2.7□□□□□ -1.98
NCKIPSDQ9NZQ3 Y_RNA.153-201ENST00000363615 91 ntBASIC2.7□□□□□ -1.98
NCKIPSDQ9NZQ3 RNU4-42P-201ENST00000364738 142 ntBASIC2.7□□□□□ -1.98
NCKIPSDQ9NZQ3 SNORD32A-201ENST00000364805 84 ntBASIC2.7□□□□□ -1.98
NCKIPSDQ9NZQ3 Y_RNA.380-201ENST00000365663 111 ntBASIC2.7□□□□□ -1.98
NCKIPSDQ9NZQ3 Y_RNA.389-201ENST00000383924 113 ntBASIC2.7□□□□□ -1.98
NCKIPSDQ9NZQ3 RNU6-622P-201ENST00000384272 103 ntBASIC2.7□□□□□ -1.98
NCKIPSDQ9NZQ3 RNU6-101P-201ENST00000410323 104 ntBASIC2.7□□□□□ -1.98
NCKIPSDQ9NZQ3 RNU6-1156P-201ENST00000410365 100 ntBASIC2.7□□□□□ -1.98
NCKIPSDQ9NZQ3 RNU6-1328P-201ENST00000410938 106 ntBASIC2.7□□□□□ -1.98
NCKIPSDQ9NZQ3 RNA5SP508-201ENST00000411327 119 ntBASIC2.7□□□□□ -1.98
NCKIPSDQ9NZQ3 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.7□□□□□ -1.98
NCKIPSDQ9NZQ3 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.7□□□□□ -1.98
NCKIPSDQ9NZQ3 MTCO3P29-201ENST00000432119 779 ntBASIC2.7□□□□□ -1.98
NCKIPSDQ9NZQ3 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.7□□□□□ -1.98
NCKIPSDQ9NZQ3 AL353752.1-201ENST00000454946 260 ntBASIC2.7□□□□□ -1.98
NCKIPSDQ9NZQ3 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.7□□□□□ -1.98
NCKIPSDQ9NZQ3 SNRPGP7-201ENST00000469016 106 ntBASIC2.7□□□□□ -1.98
NCKIPSDQ9NZQ3 RPL30P12-201ENST00000474666 353 ntBASIC2.7□□□□□ -1.98
NCKIPSDQ9NZQ3 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.7□□□□□ -1.98
NCKIPSDQ9NZQ3 AC022616.4-201ENST00000522985 181 ntBASIC2.7□□□□□ -1.98
NCKIPSDQ9NZQ3 AC110588.1-201ENST00000559699 137 ntBASIC2.7□□□□□ -1.98
NCKIPSDQ9NZQ3 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.7□□□□□ -1.98
NCKIPSDQ9NZQ3 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC2.7□□□□□ -1.98
NCKIPSDQ9NZQ3 AC016727.2-201ENST00000603988 621 ntBASIC2.7□□□□□ -1.98
NCKIPSDQ9NZQ3 SNORA43.4-201ENST00000629559 138 ntBASIC2.7□□□□□ -1.98
NCKIPSDQ9NZQ3 MIR7157-201ENST00000635801 60 ntBASIC2.7□□□□□ -1.98
NCKIPSDQ9NZQ3 MIR4272-201ENST00000635924 64 ntBASIC2.7□□□□□ -1.98
NCKIPSDQ9NZQ3 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
NCKIPSDQ9NZQ3 AC080128.1-201ENST00000474389 1917 ntBASIC2.7□□□□□ -1.98
NCKIPSDQ9NZQ3 RNU6-212P-201ENST00000362642 104 ntBASIC2.69□□□□□ -1.98
NCKIPSDQ9NZQ3 RNU6-1180P-201ENST00000364935 107 ntBASIC2.69□□□□□ -1.98
NCKIPSDQ9NZQ3 Y_RNA.314-201ENST00000365114 102 ntBASIC2.69□□□□□ -1.98
NCKIPSDQ9NZQ3 Y_RNA.574-201ENST00000384766 95 ntBASIC2.69□□□□□ -1.98
NCKIPSDQ9NZQ3 MIR627-201ENST00000384979 97 ntBASIC2.69□□□□□ -1.98
NCKIPSDQ9NZQ3 RNA5SP494-201ENST00000410653 129 ntBASIC2.69□□□□□ -1.98
NCKIPSDQ9NZQ3 DPH3P2-201ENST00000422618 250 ntBASIC2.69□□□□□ -1.98
NCKIPSDQ9NZQ3 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.69□□□□□ -1.98
NCKIPSDQ9NZQ3 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.69□□□□□ -1.98
NCKIPSDQ9NZQ3 UBBP3-201ENST00000445497 241 ntBASIC2.69□□□□□ -1.98
NCKIPSDQ9NZQ3 AC108938.1-201ENST00000451204 136 ntBASIC2.69□□□□□ -1.98
NCKIPSDQ9NZQ3 AC112492.4-201ENST00000456549 352 ntBASIC2.69□□□□□ -1.98
NCKIPSDQ9NZQ3 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.69□□□□□ -1.98
NCKIPSDQ9NZQ3 AC114801.2-201ENST00000503825 781 ntBASIC2.69□□□□□ -1.98
NCKIPSDQ9NZQ3 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2.69□□□□□ -1.98
NCKIPSDQ9NZQ3 SCARNA3-201ENST00000517097 143 ntBASIC2.69□□□□□ -1.98
NCKIPSDQ9NZQ3 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.69□□□□□ -1.98
NCKIPSDQ9NZQ3 CKS1BP7-201ENST00000522230 235 ntBASIC2.69□□□□□ -1.98
NCKIPSDQ9NZQ3 MRPS36P4-201ENST00000534436 298 ntBASIC2.69□□□□□ -1.98
NCKIPSDQ9NZQ3 AC079598.5-201ENST00000547460 117 ntBASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 130.7 ms