Protein–RNA interactions for Protein: Q9NXS3

KLHL28, Kelch-like protein 28, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL28Q9NXS3 RNU6-955P-201ENST00000410497 104 ntBASIC1.4□□□□□ -2.19
KLHL28Q9NXS3 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC1.4□□□□□ -2.19
KLHL28Q9NXS3 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC1.4□□□□□ -2.19
KLHL28Q9NXS3 SDAD1P3-201ENST00000427380 333 ntBASIC1.4□□□□□ -2.19
KLHL28Q9NXS3 MTCO2P19-201ENST00000427513 598 ntBASIC1.4□□□□□ -2.19
KLHL28Q9NXS3 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.4□□□□□ -2.19
KLHL28Q9NXS3 HSPE1P24-201ENST00000450782 238 ntBASIC1.4□□□□□ -2.19
KLHL28Q9NXS3 AMD1P1-201ENST00000457220 922 ntBASIC1.4□□□□□ -2.19
KLHL28Q9NXS3 RPL31P3-201ENST00000458430 332 ntBASIC1.4□□□□□ -2.19
KLHL28Q9NXS3 TOMM22P6-201ENST00000465035 409 ntBASIC1.4□□□□□ -2.19
KLHL28Q9NXS3 HMGN1P13-201ENST00000505795 138 ntBASIC1.4□□□□□ -2.19
KLHL28Q9NXS3 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.4□□□□□ -2.19
KLHL28Q9NXS3 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.4□□□□□ -2.19
KLHL28Q9NXS3 MTND2P38-201ENST00000522536 667 ntBASIC1.4□□□□□ -2.19
KLHL28Q9NXS3 EIF4A1P12-201ENST00000551910 141 ntBASIC1.4□□□□□ -2.19
KLHL28Q9NXS3 DNAJC19P9-201ENST00000555084 351 ntBASIC1.4□□□□□ -2.19
KLHL28Q9NXS3 AL160236.1-201ENST00000556317 195 ntBASIC1.4□□□□□ -2.19
KLHL28Q9NXS3 SUB1P3-201ENST00000564581 315 ntBASIC1.4□□□□□ -2.19
KLHL28Q9NXS3 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.4□□□□□ -2.19
KLHL28Q9NXS3 MIR3941-201ENST00000582572 103 ntBASIC1.4□□□□□ -2.19
KLHL28Q9NXS3 AC073648.5-201ENST00000603502 305 ntBASIC1.4□□□□□ -2.19
KLHL28Q9NXS3 AP001596.2-201ENST00000608410 312 ntBASIC1.4□□□□□ -2.19
KLHL28Q9NXS3 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
KLHL28Q9NXS3 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
KLHL28Q9NXS3 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
KLHL28Q9NXS3 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
KLHL28Q9NXS3 RNU6-414P-201ENST00000363705 104 ntBASIC1.39□□□□□ -2.19
KLHL28Q9NXS3 SNORD31B-201ENST00000364977 69 ntBASIC1.39□□□□□ -2.19
KLHL28Q9NXS3 SNORA67.6-201ENST00000391093 99 ntBASIC1.39□□□□□ -2.19
KLHL28Q9NXS3 RNA5SP247-201ENST00000411181 105 ntBASIC1.39□□□□□ -2.19
KLHL28Q9NXS3 RPL30P13-201ENST00000418873 348 ntBASIC1.39□□□□□ -2.19
KLHL28Q9NXS3 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.39□□□□□ -2.19
KLHL28Q9NXS3 Z82205.1-201ENST00000428456 297 ntBASIC1.39□□□□□ -2.19
KLHL28Q9NXS3 UBE2V1P8-201ENST00000437166 265 ntBASIC1.39□□□□□ -2.19
KLHL28Q9NXS3 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC1.39□□□□□ -2.19
KLHL28Q9NXS3 RNU7-95P-201ENST00000459222 64 ntBASIC1.39□□□□□ -2.19
KLHL28Q9NXS3 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC1.39□□□□□ -2.19
KLHL28Q9NXS3 RNU6-567P-201ENST00000516746 107 ntBASIC1.39□□□□□ -2.19
KLHL28Q9NXS3 AC069113.1-201ENST00000517763 267 ntBASIC1.39□□□□□ -2.19
KLHL28Q9NXS3 SUMO2P18-201ENST00000518873 252 ntBASIC1.39□□□□□ -2.19
KLHL28Q9NXS3 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC1.39□□□□□ -2.19
KLHL28Q9NXS3 AP003034.1-201ENST00000534621 422 ntBASIC1.39□□□□□ -2.19
KLHL28Q9NXS3 AC015720.1-201ENST00000565251 277 ntBASIC1.39□□□□□ -2.19
KLHL28Q9NXS3 CYP4A27P-201ENST00000567218 190 ntBASIC1.39□□□□□ -2.19
KLHL28Q9NXS3 MTND1P15-201ENST00000579262 949 ntBASIC1.39□□□□□ -2.19
KLHL28Q9NXS3 Z98751.3-201ENST00000604447 521 ntBASIC1.39□□□□□ -2.19
KLHL28Q9NXS3 AP001836.1-201ENST00000604675 523 ntBASIC1.39□□□□□ -2.19
KLHL28Q9NXS3 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.39□□□□□ -2.19
KLHL28Q9NXS3 AC068205.3-201ENST00000636385 468 ntBASIC1.39□□□□□ -2.19
KLHL28Q9NXS3 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.38□□□□□ -2.19
KLHL28Q9NXS3 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.38□□□□□ -2.19
KLHL28Q9NXS3 MIR26B-201ENST00000362251 77 ntBASIC1.38□□□□□ -2.19
KLHL28Q9NXS3 RNU6-60P-201ENST00000364792 103 ntBASIC1.38□□□□□ -2.19
KLHL28Q9NXS3 RNU6-1103P-201ENST00000384150 107 ntBASIC1.38□□□□□ -2.19
KLHL28Q9NXS3 RNU6-378P-201ENST00000384324 107 ntBASIC1.38□□□□□ -2.19
KLHL28Q9NXS3 MIR320A-201ENST00000385302 82 ntBASIC1.38□□□□□ -2.19
KLHL28Q9NXS3 RNU6-1158P-201ENST00000391167 107 ntBASIC1.38□□□□□ -2.19
KLHL28Q9NXS3 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.38□□□□□ -2.19
KLHL28Q9NXS3 RPL21P111-201ENST00000418453 477 ntBASIC1.38□□□□□ -2.19
KLHL28Q9NXS3 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.38□□□□□ -2.19
KLHL28Q9NXS3 AC073464.1-201ENST00000429823 534 ntBASIC1.38□□□□□ -2.19
KLHL28Q9NXS3 AC002486.1-201ENST00000435098 391 ntBASIC1.38□□□□□ -2.19
KLHL28Q9NXS3 AL356010.1-201ENST00000456364 102 ntBASIC1.38□□□□□ -2.19
KLHL28Q9NXS3 RNU7-14P-201ENST00000459331 62 ntBASIC1.38□□□□□ -2.19
KLHL28Q9NXS3 RPS3AP17-201ENST00000472594 777 ntBASIC1.38□□□□□ -2.19
KLHL28Q9NXS3 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.38□□□□□ -2.19
KLHL28Q9NXS3 AC008628.2-201ENST00000502605 298 ntBASIC1.38□□□□□ -2.19
KLHL28Q9NXS3 AC091874.1-201ENST00000511402 339 ntBASIC1.38□□□□□ -2.19
KLHL28Q9NXS3 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.38□□□□□ -2.19
KLHL28Q9NXS3 AC105417.1-201ENST00000514691 285 ntBASIC1.38□□□□□ -2.19
KLHL28Q9NXS3 RN7SKP298-201ENST00000515950 94 ntBASIC1.38□□□□□ -2.19
KLHL28Q9NXS3 RNU6-1098P-201ENST00000516772 96 ntBASIC1.38□□□□□ -2.19
KLHL28Q9NXS3 HIF1AP1-201ENST00000553642 175 ntBASIC1.38□□□□□ -2.19
KLHL28Q9NXS3 AC021231.3-201ENST00000558497 370 ntBASIC1.38□□□□□ -2.19
KLHL28Q9NXS3 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.38□□□□□ -2.19
KLHL28Q9NXS3 SNORA77B-201ENST00000578179 125 ntBASIC1.38□□□□□ -2.19
KLHL28Q9NXS3 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.38□□□□□ -2.19
KLHL28Q9NXS3 MIR3611-201ENST00000584484 83 ntBASIC1.38□□□□□ -2.19
KLHL28Q9NXS3 RPL17P51-201ENST00000605218 238 ntBASIC1.38□□□□□ -2.19
KLHL28Q9NXS3 AC007684.1-201ENST00000609671 477 ntBASIC1.38□□□□□ -2.19
KLHL28Q9NXS3 AC005520.5-201ENST00000613926 164 ntBASIC1.38□□□□□ -2.19
KLHL28Q9NXS3 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.38□□□□□ -2.19
KLHL28Q9NXS3 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
KLHL28Q9NXS3 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.37□□□□□ -2.19
KLHL28Q9NXS3 RNU6-271P-201ENST00000363858 105 ntBASIC1.37□□□□□ -2.19
KLHL28Q9NXS3 SNORD116-2-201ENST00000384274 95 ntBASIC1.37□□□□□ -2.19
KLHL28Q9NXS3 RNU6-1119P-201ENST00000384349 108 ntBASIC1.37□□□□□ -2.19
KLHL28Q9NXS3 Y_RNA.504-201ENST00000384481 104 ntBASIC1.37□□□□□ -2.19
KLHL28Q9NXS3 SNORD116-6-201ENST00000384711 96 ntBASIC1.37□□□□□ -2.19
KLHL28Q9NXS3 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
KLHL28Q9NXS3 MIR1267-201ENST00000408723 78 ntBASIC1.37□□□□□ -2.19
KLHL28Q9NXS3 RNU6-321P-201ENST00000410912 106 ntBASIC1.37□□□□□ -2.19
KLHL28Q9NXS3 AC073415.1-201ENST00000449240 153 ntBASIC1.37□□□□□ -2.19
KLHL28Q9NXS3 SNRPFP3-201ENST00000457792 225 ntBASIC1.37□□□□□ -2.19
KLHL28Q9NXS3 AC016925.1-201ENST00000458303 298 ntBASIC1.37□□□□□ -2.19
KLHL28Q9NXS3 RNU7-167P-201ENST00000459160 62 ntBASIC1.37□□□□□ -2.19
KLHL28Q9NXS3 AC005840.1-201ENST00000498412 377 ntBASIC1.37□□□□□ -2.19
KLHL28Q9NXS3 CCDC34P1-201ENST00000507441 517 ntBASIC1.37□□□□□ -2.19
KLHL28Q9NXS3 AC108078.1-201ENST00000508073 725 ntBASIC1.37□□□□□ -2.19
KLHL28Q9NXS3 AC091133.4-201ENST00000511142 308 ntBASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 163.3 ms