Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 HMGB3P3-201ENST00000510526 400 ntBASIC2.55□□□□□ -2
DDX4Q9NQI0 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.55□□□□□ -2
DDX4Q9NQI0 RNU6-826P-201ENST00000516827 104 ntBASIC2.55□□□□□ -2
DDX4Q9NQI0 SCARNA3-201ENST00000517097 143 ntBASIC2.55□□□□□ -2
DDX4Q9NQI0 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.55□□□□□ -2
DDX4Q9NQI0 AC021231.3-201ENST00000558497 370 ntBASIC2.55□□□□□ -2
DDX4Q9NQI0 AL356575.1-201ENST00000603008 283 ntBASIC2.55□□□□□ -2
DDX4Q9NQI0 AC025754.2-201ENST00000606491 432 ntBASIC2.55□□□□□ -2
DDX4Q9NQI0 AC126177.8-201ENST00000618339 1015 ntBASIC2.55□□□□□ -2
DDX4Q9NQI0 AC010297.1-201ENST00000623948 149 ntBASIC2.55□□□□□ -2
DDX4Q9NQI0 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.54□□□□□ -2
DDX4Q9NQI0 AL356292.1-201ENST00000283110 373 ntBASIC2.54□□□□□ -2
DDX4Q9NQI0 Y_RNA.2-201ENST00000362330 96 ntBASIC2.54□□□□□ -2
DDX4Q9NQI0 RNU6-655P-201ENST00000362858 107 ntBASIC2.54□□□□□ -2
DDX4Q9NQI0 RNU4-56P-201ENST00000364700 142 ntBASIC2.54□□□□□ -2
DDX4Q9NQI0 Y_RNA.315-201ENST00000365117 102 ntBASIC2.54□□□□□ -2
DDX4Q9NQI0 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC2.54□□□□□ -2
DDX4Q9NQI0 SNORA26.3-201ENST00000391119 136 ntBASIC2.54□□□□□ -2
DDX4Q9NQI0 U6atac.2-201ENST00000408644 118 ntBASIC2.54□□□□□ -2
DDX4Q9NQI0 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.54□□□□□ -2
DDX4Q9NQI0 Y_RNA.638-201ENST00000459374 113 ntBASIC2.54□□□□□ -2
DDX4Q9NQI0 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.54□□□□□ -2
DDX4Q9NQI0 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.54□□□□□ -2
DDX4Q9NQI0 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC2.54□□□□□ -2
DDX4Q9NQI0 RNU6-567P-201ENST00000516746 107 ntBASIC2.54□□□□□ -2
DDX4Q9NQI0 Y_RNA.718-201ENST00000517110 102 ntBASIC2.54□□□□□ -2
DDX4Q9NQI0 HSPE1P18-201ENST00000517602 280 ntBASIC2.54□□□□□ -2
DDX4Q9NQI0 AC004486.1-201ENST00000546846 233 ntBASIC2.54□□□□□ -2
DDX4Q9NQI0 AC007375.1-201ENST00000554513 578 ntBASIC2.54□□□□□ -2
DDX4Q9NQI0 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.54□□□□□ -2
DDX4Q9NQI0 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC2.54□□□□□ -2
DDX4Q9NQI0 MIR3199-1-201ENST00000582434 88 ntBASIC2.54□□□□□ -2
DDX4Q9NQI0 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
DDX4Q9NQI0 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
DDX4Q9NQI0 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.53□□□□□ -2
DDX4Q9NQI0 RNU6-1059P-201ENST00000363752 98 ntBASIC2.53□□□□□ -2
DDX4Q9NQI0 RNU6-1286P-201ENST00000383871 107 ntBASIC2.53□□□□□ -2
DDX4Q9NQI0 RNU6-968P-201ENST00000384076 107 ntBASIC2.53□□□□□ -2
DDX4Q9NQI0 RNU1-52P-201ENST00000384190 164 ntBASIC2.53□□□□□ -2
DDX4Q9NQI0 Y_RNA.460-201ENST00000384255 102 ntBASIC2.53□□□□□ -2
DDX4Q9NQI0 RNU6-842P-201ENST00000384269 107 ntBASIC2.53□□□□□ -2
DDX4Q9NQI0 Y_RNA.490-201ENST00000384413 102 ntBASIC2.53□□□□□ -2
DDX4Q9NQI0 SNORD116-29-201ENST00000384516 83 ntBASIC2.53□□□□□ -2
DDX4Q9NQI0 Y_RNA.535-201ENST00000384612 99 ntBASIC2.53□□□□□ -2
DDX4Q9NQI0 MIR218-1-201ENST00000384999 110 ntBASIC2.53□□□□□ -2
DDX4Q9NQI0 RPS20P15-201ENST00000412792 311 ntBASIC2.53□□□□□ -2
DDX4Q9NQI0 EIF4EP4-201ENST00000424916 578 ntBASIC2.53□□□□□ -2
DDX4Q9NQI0 AL445646.1-201ENST00000431784 216 ntBASIC2.53□□□□□ -2
DDX4Q9NQI0 GPM6BP3-201ENST00000442797 145 ntBASIC2.53□□□□□ -2
DDX4Q9NQI0 ELOCP24-201ENST00000456370 334 ntBASIC2.53□□□□□ -2
DDX4Q9NQI0 RNU7-152P-201ENST00000458982 64 ntBASIC2.53□□□□□ -2
DDX4Q9NQI0 AC080013.2-201ENST00000460866 323 ntBASIC2.53□□□□□ -2
DDX4Q9NQI0 SNRPGP7-201ENST00000469016 106 ntBASIC2.53□□□□□ -2
DDX4Q9NQI0 RPL30P1-201ENST00000488676 339 ntBASIC2.53□□□□□ -2
DDX4Q9NQI0 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.53□□□□□ -2
DDX4Q9NQI0 AC107222.1-201ENST00000510899 637 ntBASIC2.53□□□□□ -2
DDX4Q9NQI0 RNU2-53P-201ENST00000516257 147 ntBASIC2.53□□□□□ -2
DDX4Q9NQI0 AC069294.1-201ENST00000608397 350 ntBASIC2.53□□□□□ -2
DDX4Q9NQI0 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
DDX4Q9NQI0 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC2.53□□□□□ -2.01
DDX4Q9NQI0 ZNF299P-201ENST00000406845 1804 ntBASIC2.52□□□□□ -2.01
DDX4Q9NQI0 AC092881.1-201ENST00000638218 2733 ntBASIC2.52□□□□□ -2.01
DDX4Q9NQI0 MIR6073-201ENST00000352083 89 ntBASIC2.52□□□□□ -2.01
DDX4Q9NQI0 Y_RNA.58-201ENST00000362807 102 ntBASIC2.52□□□□□ -2.01
DDX4Q9NQI0 Y_RNA.154-201ENST00000363624 102 ntBASIC2.52□□□□□ -2.01
DDX4Q9NQI0 RNY3P1-201ENST00000365085 102 ntBASIC2.52□□□□□ -2.01
DDX4Q9NQI0 RNY3-201ENST00000365484 102 ntBASIC2.52□□□□□ -2.01
DDX4Q9NQI0 Y_RNA.504-201ENST00000384481 104 ntBASIC2.52□□□□□ -2.01
DDX4Q9NQI0 CBX3P9-201ENST00000402326 552 ntBASIC2.52□□□□□ -2.01
DDX4Q9NQI0 AL139156.1-201ENST00000412785 841 ntBASIC2.52□□□□□ -2.01
DDX4Q9NQI0 AC079354.2-201ENST00000453523 154 ntBASIC2.52□□□□□ -2.01
DDX4Q9NQI0 AL121594.1-201ENST00000475906 575 ntBASIC2.52□□□□□ -2.01
DDX4Q9NQI0 RPL7P42-201ENST00000481005 679 ntBASIC2.52□□□□□ -2.01
DDX4Q9NQI0 AC097473.1-201ENST00000508142 408 ntBASIC2.52□□□□□ -2.01
DDX4Q9NQI0 SNORA31.15-201ENST00000516771 132 ntBASIC2.52□□□□□ -2.01
DDX4Q9NQI0 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.52□□□□□ -2.01
DDX4Q9NQI0 MIR5571-201ENST00000577998 113 ntBASIC2.52□□□□□ -2.01
DDX4Q9NQI0 AC105245.1-201ENST00000581934 244 ntBASIC2.52□□□□□ -2.01
DDX4Q9NQI0 7SK.7-201ENST00000603504 247 ntBASIC2.52□□□□□ -2.01
DDX4Q9NQI0 MIR6132-201ENST00000622083 109 ntBASIC2.52□□□□□ -2.01
DDX4Q9NQI0 ZNF271P-202ENST00000465539 1970 ntBASIC2.52□□□□□ -2.01
DDX4Q9NQI0 AC233981.2-201ENST00000611524 1614 ntBASIC2.51□□□□□ -2.01
DDX4Q9NQI0 SNORD50.1-201ENST00000362987 71 ntBASIC2.51□□□□□ -2.01
DDX4Q9NQI0 U3.13-201ENST00000364804 214 ntBASIC2.51□□□□□ -2.01
DDX4Q9NQI0 RNU6-310P-201ENST00000384655 107 ntBASIC2.51□□□□□ -2.01
DDX4Q9NQI0 SNORA75.6-201ENST00000391318 127 ntBASIC2.51□□□□□ -2.01
DDX4Q9NQI0 RNU6-1328P-201ENST00000410938 106 ntBASIC2.51□□□□□ -2.01
DDX4Q9NQI0 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.51□□□□□ -2.01
DDX4Q9NQI0 AIMP1P2-201ENST00000425294 312 ntBASIC2.51□□□□□ -2.01
DDX4Q9NQI0 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.51□□□□□ -2.01
DDX4Q9NQI0 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.51□□□□□ -2.01
DDX4Q9NQI0 AC011753.1-201ENST00000451001 220 ntBASIC2.51□□□□□ -2.01
DDX4Q9NQI0 AC005741.1-201ENST00000511094 432 ntBASIC2.51□□□□□ -2.01
DDX4Q9NQI0 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.51□□□□□ -2.01
DDX4Q9NQI0 DEFB122-202ENST00000569013 197 ntBASIC2.51□□□□□ -2.01
DDX4Q9NQI0 MIR5696-201ENST00000578474 85 ntBASIC2.51□□□□□ -2.01
DDX4Q9NQI0 MIR3670-2-201ENST00000582974 65 ntBASIC2.51□□□□□ -2.01
DDX4Q9NQI0 MIR3670-1-201ENST00000584160 65 ntBASIC2.51□□□□□ -2.01
DDX4Q9NQI0 MIR3670-3-201ENST00000584855 65 ntBASIC2.51□□□□□ -2.01
DDX4Q9NQI0 CYP2C61P-201ENST00000604072 290 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms