Protein–RNA interactions for Protein: Q9NQ50

MRPL40, 39S ribosomal protein L40, mitochondrial, humanhuman

Known RBP Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40Q9NQ50 RPS20P2-201ENST00000402520 389 ntBASIC0.06□□□□□ -2.4
MRPL40Q9NQ50 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC0.06□□□□□ -2.4
MRPL40Q9NQ50 AC092809.3-201ENST00000415453 231 ntBASIC0.06□□□□□ -2.4
MRPL40Q9NQ50 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC0.06□□□□□ -2.4
MRPL40Q9NQ50 RNU2-34P-201ENST00000516534 121 ntBASIC0.06□□□□□ -2.4
MRPL40Q9NQ50 DEFB130C-202ENST00000530001 230 ntBASIC0.06□□□□□ -2.4
MRPL40Q9NQ50 MIR4305-201ENST00000583252 102 ntBASIC0.06□□□□□ -2.4
MRPL40Q9NQ50 AL356157.2-201ENST00000605122 111 ntBASIC0.06□□□□□ -2.4
MRPL40Q9NQ50 AC131159.1-201ENST00000621854 213 ntBASIC0.06□□□□□ -2.4
MRPL40Q9NQ50 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.05□□□□□ -2.4
MRPL40Q9NQ50 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.05□□□□□ -2.4
MRPL40Q9NQ50 SNORD41-201ENST00000386967 70 ntBASIC0.05□□□□□ -2.4
MRPL40Q9NQ50 RNA5SP201-201ENST00000410316 124 ntBASIC0.05□□□□□ -2.4
MRPL40Q9NQ50 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC0.05□□□□□ -2.4
MRPL40Q9NQ50 DAP3P1-201ENST00000441522 278 ntBASIC0.05□□□□□ -2.4
MRPL40Q9NQ50 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC0.05□□□□□ -2.4
MRPL40Q9NQ50 AC024995.1-201ENST00000523014 93 ntBASIC0.05□□□□□ -2.4
MRPL40Q9NQ50 AC110760.3-201ENST00000598794 467 ntBASIC0.05□□□□□ -2.4
MRPL40Q9NQ50 AC012507.3-201ENST00000603556 477 ntBASIC0.05□□□□□ -2.4
MRPL40Q9NQ50 AL357312.1-201ENST00000603879 298 ntBASIC0.05□□□□□ -2.4
MRPL40Q9NQ50 PRELID3BP2-201ENST00000605362 201 ntBASIC0.05□□□□□ -2.4
MRPL40Q9NQ50 AC103706.2-201ENST00000638080 240 ntBASIC0.05□□□□□ -2.4
MRPL40Q9NQ50 MIR6759-201ENST00000638110 65 ntBASIC0.05□□□□□ -2.4
MRPL40Q9NQ50 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.04□□□□□ -2.4
MRPL40Q9NQ50 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC0.04□□□□□ -2.4
MRPL40Q9NQ50 RNU6-78P-201ENST00000362897 107 ntBASIC0.04□□□□□ -2.4
MRPL40Q9NQ50 Y_RNA.132-201ENST00000363421 102 ntBASIC0.04□□□□□ -2.4
MRPL40Q9NQ50 C1DP2-201ENST00000418167 426 ntBASIC0.04□□□□□ -2.4
MRPL40Q9NQ50 UBE2D3P3-201ENST00000426992 425 ntBASIC0.04□□□□□ -2.4
MRPL40Q9NQ50 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.04□□□□□ -2.4
MRPL40Q9NQ50 C1DP4-201ENST00000455429 424 ntBASIC0.04□□□□□ -2.4
MRPL40Q9NQ50 RPL39P39-201ENST00000455840 151 ntBASIC0.04□□□□□ -2.4
MRPL40Q9NQ50 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC0.04□□□□□ -2.4
MRPL40Q9NQ50 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC0.04□□□□□ -2.4
MRPL40Q9NQ50 RNU5F-4P-201ENST00000516581 114 ntBASIC0.04□□□□□ -2.4
MRPL40Q9NQ50 RNU6-1098P-201ENST00000516772 96 ntBASIC0.04□□□□□ -2.4
MRPL40Q9NQ50 AL513423.1-201ENST00000621695 132 ntBASIC0.04□□□□□ -2.4
MRPL40Q9NQ50 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.04□□□□□ -2.4
MRPL40Q9NQ50 RNU1-76P-201ENST00000362903 159 ntBASIC0.03□□□□□ -2.4
MRPL40Q9NQ50 RNU6-384P-201ENST00000364900 104 ntBASIC0.03□□□□□ -2.4
MRPL40Q9NQ50 SNORA75.2-201ENST00000391138 150 ntBASIC0.03□□□□□ -2.4
MRPL40Q9NQ50 SNORA75.3-201ENST00000391231 150 ntBASIC0.03□□□□□ -2.4
MRPL40Q9NQ50 AL034345.1-201ENST00000407768 123 ntBASIC0.03□□□□□ -2.4
MRPL40Q9NQ50 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.03□□□□□ -2.4
MRPL40Q9NQ50 HIGD1AP15-201ENST00000416198 280 ntBASIC0.03□□□□□ -2.4
MRPL40Q9NQ50 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC0.03□□□□□ -2.4
MRPL40Q9NQ50 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.03□□□□□ -2.4
MRPL40Q9NQ50 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC0.03□□□□□ -2.4
MRPL40Q9NQ50 RNU6-947P-201ENST00000516264 106 ntBASIC0.03□□□□□ -2.4
MRPL40Q9NQ50 AC016256.1-201ENST00000547971 354 ntBASIC0.03□□□□□ -2.4
MRPL40Q9NQ50 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC0.03□□□□□ -2.4
MRPL40Q9NQ50 AC021231.3-201ENST00000558497 370 ntBASIC0.03□□□□□ -2.4
MRPL40Q9NQ50 MIR4667-201ENST00000578933 66 ntBASIC0.03□□□□□ -2.4
MRPL40Q9NQ50 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC0.03□□□□□ -2.4
MRPL40Q9NQ50 AC092104.1-201ENST00000497346 1441 ntBASIC0.03□□□□□ -2.41
MRPL40Q9NQ50 MTND5P16-201ENST00000460269 1703 ntBASIC0.02□□□□□ -2.41
MRPL40Q9NQ50 U3.9-201ENST00000363823 204 ntBASIC0.02□□□□□ -2.41
MRPL40Q9NQ50 RNU6-1026P-201ENST00000384465 108 ntBASIC0.02□□□□□ -2.41
MRPL40Q9NQ50 RNU6-1067P-201ENST00000384752 107 ntBASIC0.02□□□□□ -2.41
MRPL40Q9NQ50 MIR320C1-201ENST00000408566 88 ntBASIC0.02□□□□□ -2.41
MRPL40Q9NQ50 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC0.02□□□□□ -2.41
MRPL40Q9NQ50 RSL24D1P8-201ENST00000434442 492 ntBASIC0.02□□□□□ -2.41
MRPL40Q9NQ50 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC0.02□□□□□ -2.41
MRPL40Q9NQ50 AC007547.1-201ENST00000462177 490 ntBASIC0.02□□□□□ -2.41
MRPL40Q9NQ50 AP000797.1-201ENST00000478870 387 ntBASIC0.02□□□□□ -2.41
MRPL40Q9NQ50 MTND1P15-201ENST00000579262 949 ntBASIC0.02□□□□□ -2.41
MRPL40Q9NQ50 AC008752.3-201ENST00000588113 712 ntBASIC0.02□□□□□ -2.41
MRPL40Q9NQ50 AC080078.2-201ENST00000603766 501 ntBASIC0.02□□□□□ -2.41
MRPL40Q9NQ50 Z98751.3-201ENST00000604447 521 ntBASIC0.02□□□□□ -2.41
MRPL40Q9NQ50 AL360085.1-201ENST00000604713 532 ntBASIC0.02□□□□□ -2.41
MRPL40Q9NQ50 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC0.02□□□□□ -2.41
MRPL40Q9NQ50 AC104073.3-201ENST00000610942 955 ntBASIC0.02□□□□□ -2.41
MRPL40Q9NQ50 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC0.02□□□□□ -2.41
MRPL40Q9NQ50 AC104985.3-201ENST00000623479 597 ntBASIC0.02□□□□□ -2.41
MRPL40Q9NQ50 AC100810.6-201ENST00000638068 285 ntBASIC0.02□□□□□ -2.41
MRPL40Q9NQ50 MIR371B-201ENST00000638082 66 ntBASIC0.02□□□□□ -2.41
MRPL40Q9NQ50 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC0.02□□□□□ -2.41
MRPL40Q9NQ50 BX322639.1-202ENST00000423987 2213 ntBASIC0.02□□□□□ -2.41
MRPL40Q9NQ50 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.01□□□□□ -2.41
MRPL40Q9NQ50 RNU4-56P-201ENST00000364700 142 ntBASIC0.01□□□□□ -2.41
MRPL40Q9NQ50 Y_RNA.274-201ENST00000364714 101 ntBASIC0.01□□□□□ -2.41
MRPL40Q9NQ50 RNU6-877P-201ENST00000383868 107 ntBASIC0.01□□□□□ -2.41
MRPL40Q9NQ50 RNU6-946P-201ENST00000383878 107 ntBASIC0.01□□□□□ -2.41
MRPL40Q9NQ50 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.01□□□□□ -2.41
MRPL40Q9NQ50 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC0.01□□□□□ -2.41
MRPL40Q9NQ50 AC067940.1-201ENST00000458411 300 ntBASIC0.01□□□□□ -2.41
MRPL40Q9NQ50 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC0.01□□□□□ -2.41
MRPL40Q9NQ50 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC0.01□□□□□ -2.41
MRPL40Q9NQ50 AC109445.1-201ENST00000512356 383 ntBASIC0.01□□□□□ -2.41
MRPL40Q9NQ50 RNU6-1110P-201ENST00000516462 101 ntBASIC0.01□□□□□ -2.41
MRPL40Q9NQ50 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC0.01□□□□□ -2.41
MRPL40Q9NQ50 MIR548AC-201ENST00000585049 88 ntBASIC0.01□□□□□ -2.41
MRPL40Q9NQ50 AL390123.1-201ENST00000603216 237 ntBASIC0.01□□□□□ -2.41
MRPL40Q9NQ50 RAC1P9-201ENST00000604990 392 ntBASIC0.01□□□□□ -2.41
MRPL40Q9NQ50 AC099785.1-201ENST00000605697 437 ntBASIC0.01□□□□□ -2.41
MRPL40Q9NQ50 AC026585.1-201ENST00000619582 524 ntBASIC0.01□□□□□ -2.41
MRPL40Q9NQ50 AC006927.4-201ENST00000639187 543 ntBASIC0.01□□□□□ -2.41
MRPL40Q9NQ50 RNU6-960P-201ENST00000364056 120 ntBASIC0□□□□□ -2.41
MRPL40Q9NQ50 RNU4-76P-201ENST00000364509 141 ntBASIC0□□□□□ -2.41
MRPL40Q9NQ50 snoZ40.1-201ENST00000364540 72 ntBASIC0□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 128.5 ms