Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 MTCO3P23-201ENST00000561363 289 ntBASIC1.56□□□□□ -2.16
TM9SF3Q9HD45 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.56□□□□□ -2.16
TM9SF3Q9HD45 AC015720.1-201ENST00000565251 277 ntBASIC1.56□□□□□ -2.16
TM9SF3Q9HD45 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC1.56□□□□□ -2.16
TM9SF3Q9HD45 PIGPP4-201ENST00000584447 307 ntBASIC1.56□□□□□ -2.16
TM9SF3Q9HD45 AC087683.1-201ENST00000591187 441 ntBASIC1.56□□□□□ -2.16
TM9SF3Q9HD45 AP001485.1-201ENST00000604799 199 ntBASIC1.56□□□□□ -2.16
TM9SF3Q9HD45 AC068944.2-201ENST00000610373 403 ntBASIC1.56□□□□□ -2.16
TM9SF3Q9HD45 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.56□□□□□ -2.16
TM9SF3Q9HD45 AL590240.4-201ENST00000616908 390 ntBASIC1.56□□□□□ -2.16
TM9SF3Q9HD45 uc_338.11-201ENST00000619132 160 ntBASIC1.56□□□□□ -2.16
TM9SF3Q9HD45 AL158209.2-201ENST00000619266 216 ntBASIC1.56□□□□□ -2.16
TM9SF3Q9HD45 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.55□□□□□ -2.16
TM9SF3Q9HD45 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.55□□□□□ -2.16
TM9SF3Q9HD45 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
TM9SF3Q9HD45 RNU4-15P-201ENST00000362613 141 ntBASIC1.55□□□□□ -2.16
TM9SF3Q9HD45 Y_RNA.480-201ENST00000384364 102 ntBASIC1.55□□□□□ -2.16
TM9SF3Q9HD45 MIR499A-201ENST00000384903 122 ntBASIC1.55□□□□□ -2.16
TM9SF3Q9HD45 RNU6-174P-201ENST00000410406 106 ntBASIC1.55□□□□□ -2.16
TM9SF3Q9HD45 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.55□□□□□ -2.16
TM9SF3Q9HD45 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC1.55□□□□□ -2.16
TM9SF3Q9HD45 AC010975.2-201ENST00000427781 588 ntBASIC1.55□□□□□ -2.16
TM9SF3Q9HD45 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.55□□□□□ -2.16
TM9SF3Q9HD45 AC013470.1-201ENST00000453438 462 ntBASIC1.55□□□□□ -2.16
TM9SF3Q9HD45 MTCO3P38-201ENST00000468910 766 ntBASIC1.55□□□□□ -2.16
TM9SF3Q9HD45 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.55□□□□□ -2.16
TM9SF3Q9HD45 AC093534.1-201ENST00000504977 132 ntBASIC1.55□□□□□ -2.16
TM9SF3Q9HD45 AC005741.1-201ENST00000511094 432 ntBASIC1.55□□□□□ -2.16
TM9SF3Q9HD45 SNORA40.12-201ENST00000516329 111 ntBASIC1.55□□□□□ -2.16
TM9SF3Q9HD45 SNORA31.17-201ENST00000516953 127 ntBASIC1.55□□□□□ -2.16
TM9SF3Q9HD45 AC018889.1-201ENST00000605372 397 ntBASIC1.55□□□□□ -2.16
TM9SF3Q9HD45 U2.17-201ENST00000611454 95 ntBASIC1.55□□□□□ -2.16
TM9SF3Q9HD45 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC1.55□□□□□ -2.16
TM9SF3Q9HD45 OR5AK4P-201ENST00000635912 903 ntBASIC1.55□□□□□ -2.16
TM9SF3Q9HD45 SNORD98-201ENST00000636377 67 ntBASIC1.55□□□□□ -2.16
TM9SF3Q9HD45 SNORD32A-201ENST00000364805 84 ntBASIC1.54□□□□□ -2.16
TM9SF3Q9HD45 Y_RNA.327-201ENST00000365201 102 ntBASIC1.54□□□□□ -2.16
TM9SF3Q9HD45 Y_RNA.378-201ENST00000365652 113 ntBASIC1.54□□□□□ -2.16
TM9SF3Q9HD45 Y_RNA.399-201ENST00000383955 105 ntBASIC1.54□□□□□ -2.16
TM9SF3Q9HD45 SNORA36A-201ENST00000384221 132 ntBASIC1.54□□□□□ -2.16
TM9SF3Q9HD45 MIR517C-201ENST00000385103 95 ntBASIC1.54□□□□□ -2.16
TM9SF3Q9HD45 RN7SKP51-201ENST00000410781 304 ntBASIC1.54□□□□□ -2.16
TM9SF3Q9HD45 AC016907.1-201ENST00000419483 435 ntBASIC1.54□□□□□ -2.16
TM9SF3Q9HD45 DLGAP5P1-201ENST00000430307 464 ntBASIC1.54□□□□□ -2.16
TM9SF3Q9HD45 MTCO1P44-201ENST00000441935 243 ntBASIC1.54□□□□□ -2.16
TM9SF3Q9HD45 MTND1P29-201ENST00000448112 647 ntBASIC1.54□□□□□ -2.16
TM9SF3Q9HD45 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.54□□□□□ -2.16
TM9SF3Q9HD45 RNU1-131P-201ENST00000458943 161 ntBASIC1.54□□□□□ -2.16
TM9SF3Q9HD45 AC087477.1-201ENST00000465747 340 ntBASIC1.54□□□□□ -2.16
TM9SF3Q9HD45 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.54□□□□□ -2.16
TM9SF3Q9HD45 AC145146.1-201ENST00000496370 254 ntBASIC1.54□□□□□ -2.16
TM9SF3Q9HD45 AC022447.4-201ENST00000504053 364 ntBASIC1.54□□□□□ -2.16
TM9SF3Q9HD45 MTND3P5-201ENST00000512798 333 ntBASIC1.54□□□□□ -2.16
TM9SF3Q9HD45 RNA5SP401-201ENST00000515920 127 ntBASIC1.54□□□□□ -2.16
TM9SF3Q9HD45 MTND4P7-201ENST00000523876 130 ntBASIC1.54□□□□□ -2.16
TM9SF3Q9HD45 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC1.54□□□□□ -2.16
TM9SF3Q9HD45 COPS8P3-201ENST00000526024 482 ntBASIC1.54□□□□□ -2.16
TM9SF3Q9HD45 AC104383.1-201ENST00000530297 370 ntBASIC1.54□□□□□ -2.16
TM9SF3Q9HD45 SUB1P4-201ENST00000566062 339 ntBASIC1.54□□□□□ -2.16
TM9SF3Q9HD45 MIR4424-201ENST00000585257 86 ntBASIC1.54□□□□□ -2.16
TM9SF3Q9HD45 AL121757.2-201ENST00000611223 313 ntBASIC1.54□□□□□ -2.16
TM9SF3Q9HD45 AC005609.4-201ENST00000625071 447 ntBASIC1.54□□□□□ -2.16
TM9SF3Q9HD45 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
TM9SF3Q9HD45 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
TM9SF3Q9HD45 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.54□□□□□ -2.16
TM9SF3Q9HD45 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.53□□□□□ -2.16
TM9SF3Q9HD45 SNORA25.9-201ENST00000365087 128 ntBASIC1.53□□□□□ -2.16
TM9SF3Q9HD45 RNU4-66P-201ENST00000365199 138 ntBASIC1.53□□□□□ -2.16
TM9SF3Q9HD45 SNORA69-201ENST00000383895 132 ntBASIC1.53□□□□□ -2.16
TM9SF3Q9HD45 RNU6-259P-201ENST00000383999 107 ntBASIC1.53□□□□□ -2.16
TM9SF3Q9HD45 MIR1323-201ENST00000408090 73 ntBASIC1.53□□□□□ -2.16
TM9SF3Q9HD45 MIR1267-201ENST00000408723 78 ntBASIC1.53□□□□□ -2.16
TM9SF3Q9HD45 AL590135.1-201ENST00000422215 156 ntBASIC1.53□□□□□ -2.16
TM9SF3Q9HD45 AC019205.3-201ENST00000424573 156 ntBASIC1.53□□□□□ -2.16
TM9SF3Q9HD45 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC1.53□□□□□ -2.16
TM9SF3Q9HD45 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.53□□□□□ -2.16
TM9SF3Q9HD45 VN1R108P-201ENST00000431580 830 ntBASIC1.53□□□□□ -2.16
TM9SF3Q9HD45 SNAP23P1-201ENST00000433229 246 ntBASIC1.53□□□□□ -2.16
TM9SF3Q9HD45 AC016700.2-201ENST00000446011 156 ntBASIC1.53□□□□□ -2.16
TM9SF3Q9HD45 HMGN2P18-201ENST00000450680 270 ntBASIC1.53□□□□□ -2.16
TM9SF3Q9HD45 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.53□□□□□ -2.16
TM9SF3Q9HD45 MTCO2P18-201ENST00000457151 658 ntBASIC1.53□□□□□ -2.16
TM9SF3Q9HD45 AMD1P1-201ENST00000457220 922 ntBASIC1.53□□□□□ -2.16
TM9SF3Q9HD45 TPTE2P5-203ENST00000458118 728 ntBASIC1.53□□□□□ -2.16
TM9SF3Q9HD45 RPS29P23-201ENST00000458635 123 ntBASIC1.53□□□□□ -2.16
TM9SF3Q9HD45 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC1.53□□□□□ -2.16
TM9SF3Q9HD45 AC010409.1-201ENST00000487382 476 ntBASIC1.53□□□□□ -2.16
TM9SF3Q9HD45 AC015911.1-201ENST00000495111 156 ntBASIC1.53□□□□□ -2.16
TM9SF3Q9HD45 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.53□□□□□ -2.16
TM9SF3Q9HD45 AC104576.1-201ENST00000524225 88 ntBASIC1.53□□□□□ -2.16
TM9SF3Q9HD45 HSPE1P4-201ENST00000550617 308 ntBASIC1.53□□□□□ -2.16
TM9SF3Q9HD45 LINC02555-201ENST00000563933 1951 ntBASIC1.53□□□□□ -2.16
TM9SF3Q9HD45 AC092747.3-201ENST00000603769 301 ntBASIC1.53□□□□□ -2.16
TM9SF3Q9HD45 AL034555.1-201ENST00000604816 211 ntBASIC1.53□□□□□ -2.16
TM9SF3Q9HD45 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.17
TM9SF3Q9HD45 Y_RNA.41-201ENST00000362646 102 ntBASIC1.52□□□□□ -2.17
TM9SF3Q9HD45 RNU6-38P-201ENST00000384085 107 ntBASIC1.52□□□□□ -2.17
TM9SF3Q9HD45 RNU6-439P-201ENST00000384188 106 ntBASIC1.52□□□□□ -2.17
TM9SF3Q9HD45 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.52□□□□□ -2.17
TM9SF3Q9HD45 RPS29P13-201ENST00000402041 169 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 131.5 ms