Protein–RNA interactions for Protein: Q9HCL0

PCDH18, Protocadherin-18, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH18Q9HCL0 AL031121.1-201ENST00000406553 254 ntBASIC3.41□□□□□ -1.86
PCDH18Q9HCL0 Y_RNA.595-201ENST00000410403 105 ntBASIC3.41□□□□□ -1.86
PCDH18Q9HCL0 AC245291.1-201ENST00000419501 328 ntBASIC3.41□□□□□ -1.86
PCDH18Q9HCL0 RPS15AP5-201ENST00000436276 388 ntBASIC3.41□□□□□ -1.86
PCDH18Q9HCL0 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.41□□□□□ -1.86
PCDH18Q9HCL0 AC090525.1-201ENST00000479116 478 ntBASIC3.41□□□□□ -1.86
PCDH18Q9HCL0 AC006445.2-201ENST00000510061 472 ntBASIC3.41□□□□□ -1.86
PCDH18Q9HCL0 RNU6-1219P-201ENST00000516143 112 ntBASIC3.41□□□□□ -1.86
PCDH18Q9HCL0 RNU6-1212P-201ENST00000517023 104 ntBASIC3.41□□□□□ -1.86
PCDH18Q9HCL0 SCARNA20.6-201ENST00000517251 106 ntBASIC3.41□□□□□ -1.86
PCDH18Q9HCL0 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.41□□□□□ -1.86
PCDH18Q9HCL0 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC3.41□□□□□ -1.86
PCDH18Q9HCL0 AC021739.1-201ENST00000559631 174 ntBASIC3.41□□□□□ -1.86
PCDH18Q9HCL0 MIR4308-201ENST00000580634 81 ntBASIC3.41□□□□□ -1.86
PCDH18Q9HCL0 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC3.41□□□□□ -1.86
PCDH18Q9HCL0 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.41□□□□□ -1.86
PCDH18Q9HCL0 AL162713.1-201ENST00000604480 262 ntBASIC3.41□□□□□ -1.86
PCDH18Q9HCL0 AC073308.1-201ENST00000623696 305 ntBASIC3.41□□□□□ -1.86
PCDH18Q9HCL0 AC132825.6-201ENST00000638861 357 ntBASIC3.41□□□□□ -1.86
PCDH18Q9HCL0 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.41□□□□□ -1.86
PCDH18Q9HCL0 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
PCDH18Q9HCL0 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
PCDH18Q9HCL0 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.4□□□□□ -1.86
PCDH18Q9HCL0 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
PCDH18Q9HCL0 RNA5SP119-201ENST00000362715 117 ntBASIC3.4□□□□□ -1.87
PCDH18Q9HCL0 Y_RNA.233-201ENST00000364407 101 ntBASIC3.4□□□□□ -1.87
PCDH18Q9HCL0 Y_RNA.398-201ENST00000383952 99 ntBASIC3.4□□□□□ -1.87
PCDH18Q9HCL0 Y_RNA.597-201ENST00000410463 100 ntBASIC3.4□□□□□ -1.87
PCDH18Q9HCL0 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC3.4□□□□□ -1.87
PCDH18Q9HCL0 AC012306.1-201ENST00000423267 114 ntBASIC3.4□□□□□ -1.87
PCDH18Q9HCL0 AL358075.3-201ENST00000426289 226 ntBASIC3.4□□□□□ -1.87
PCDH18Q9HCL0 CST9LP2-201ENST00000437612 320 ntBASIC3.4□□□□□ -1.87
PCDH18Q9HCL0 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.4□□□□□ -1.87
PCDH18Q9HCL0 UQCRBP2-201ENST00000447827 297 ntBASIC3.4□□□□□ -1.87
PCDH18Q9HCL0 HMGN2P10-201ENST00000448085 265 ntBASIC3.4□□□□□ -1.87
PCDH18Q9HCL0 RNU6-625P-201ENST00000459412 107 ntBASIC3.4□□□□□ -1.87
PCDH18Q9HCL0 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
PCDH18Q9HCL0 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC3.4□□□□□ -1.87
PCDH18Q9HCL0 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.4□□□□□ -1.87
PCDH18Q9HCL0 RNU1-61P-201ENST00000516107 151 ntBASIC3.4□□□□□ -1.87
PCDH18Q9HCL0 ACA59.2-201ENST00000517061 156 ntBASIC3.4□□□□□ -1.87
PCDH18Q9HCL0 AC104027.1-201ENST00000521887 300 ntBASIC3.4□□□□□ -1.87
PCDH18Q9HCL0 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC3.4□□□□□ -1.87
PCDH18Q9HCL0 MTND5P35-201ENST00000557537 1720 ntBASIC3.4□□□□□ -1.87
PCDH18Q9HCL0 AC072026.1-201ENST00000605023 201 ntBASIC3.4□□□□□ -1.87
PCDH18Q9HCL0 AC068831.7-201ENST00000616954 363 ntBASIC3.4□□□□□ -1.87
PCDH18Q9HCL0 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.4□□□□□ -1.87
PCDH18Q9HCL0 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
PCDH18Q9HCL0 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.39□□□□□ -1.87
PCDH18Q9HCL0 RNA5SP383-201ENST00000362934 120 ntBASIC3.39□□□□□ -1.87
PCDH18Q9HCL0 Y_RNA.498-201ENST00000384460 102 ntBASIC3.39□□□□□ -1.87
PCDH18Q9HCL0 NDUFS5P4-201ENST00000412983 318 ntBASIC3.39□□□□□ -1.87
PCDH18Q9HCL0 RPL23AP36-201ENST00000413895 458 ntBASIC3.39□□□□□ -1.87
PCDH18Q9HCL0 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC3.39□□□□□ -1.87
PCDH18Q9HCL0 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC3.39□□□□□ -1.87
PCDH18Q9HCL0 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.39□□□□□ -1.87
PCDH18Q9HCL0 snoU13.28-201ENST00000459235 104 ntBASIC3.39□□□□□ -1.87
PCDH18Q9HCL0 AP001324.2-201ENST00000461163 319 ntBASIC3.39□□□□□ -1.87
PCDH18Q9HCL0 RPS29P26-201ENST00000477483 171 ntBASIC3.39□□□□□ -1.87
PCDH18Q9HCL0 MRPS18CP4-201ENST00000535821 231 ntBASIC3.39□□□□□ -1.87
PCDH18Q9HCL0 AC006199.1-201ENST00000548728 219 ntBASIC3.39□□□□□ -1.87
PCDH18Q9HCL0 MIR4282-201ENST00000583613 67 ntBASIC3.39□□□□□ -1.87
PCDH18Q9HCL0 AL110115.1-201ENST00000614396 364 ntBASIC3.39□□□□□ -1.87
PCDH18Q9HCL0 AC004467.1-201ENST00000615678 330 ntBASIC3.39□□□□□ -1.87
PCDH18Q9HCL0 AC091932.3-201ENST00000624223 323 ntBASIC3.39□□□□□ -1.87
PCDH18Q9HCL0 AC073476.4-201ENST00000628409 72 ntBASIC3.39□□□□□ -1.87
PCDH18Q9HCL0 Z83843.1-201ENST00000604070 3685 ntBASIC3.38□□□□□ -1.87
PCDH18Q9HCL0 FAM35BP-202ENST00000497389 3337 ntBASIC3.38□□□□□ -1.87
PCDH18Q9HCL0 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.38□□□□□ -1.87
PCDH18Q9HCL0 BPY2DP-201ENST00000422208 265 ntBASIC3.38□□□□□ -1.87
PCDH18Q9HCL0 HMGB3P3-201ENST00000510526 400 ntBASIC3.38□□□□□ -1.87
PCDH18Q9HCL0 RNU5F-8P-201ENST00000515941 111 ntBASIC3.38□□□□□ -1.87
PCDH18Q9HCL0 RNU1-143P-201ENST00000516296 146 ntBASIC3.38□□□□□ -1.87
PCDH18Q9HCL0 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC3.38□□□□□ -1.87
PCDH18Q9HCL0 AC018448.1-201ENST00000552843 316 ntBASIC3.38□□□□□ -1.87
PCDH18Q9HCL0 AC021231.3-201ENST00000558497 370 ntBASIC3.38□□□□□ -1.87
PCDH18Q9HCL0 AC004832.4-201ENST00000608952 331 ntBASIC3.38□□□□□ -1.87
PCDH18Q9HCL0 U1.23-201ENST00000610293 146 ntBASIC3.38□□□□□ -1.87
PCDH18Q9HCL0 RNU1-68P-201ENST00000615382 146 ntBASIC3.38□□□□□ -1.87
PCDH18Q9HCL0 U1.39-201ENST00000621562 146 ntBASIC3.38□□□□□ -1.87
PCDH18Q9HCL0 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC3.38□□□□□ -1.87
PCDH18Q9HCL0 snoU18.1-201ENST00000629629 71 ntBASIC3.38□□□□□ -1.87
PCDH18Q9HCL0 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
PCDH18Q9HCL0 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
PCDH18Q9HCL0 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
PCDH18Q9HCL0 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
PCDH18Q9HCL0 Y_RNA.179-201ENST00000363844 90 ntBASIC3.37□□□□□ -1.87
PCDH18Q9HCL0 Y_RNA.230-201ENST00000364348 109 ntBASIC3.37□□□□□ -1.87
PCDH18Q9HCL0 RNU4-56P-201ENST00000364700 142 ntBASIC3.37□□□□□ -1.87
PCDH18Q9HCL0 MIR449B-201ENST00000384995 97 ntBASIC3.37□□□□□ -1.87
PCDH18Q9HCL0 AL512633.1-201ENST00000399931 655 ntBASIC3.37□□□□□ -1.87
PCDH18Q9HCL0 RN7SKP61-201ENST00000410642 295 ntBASIC3.37□□□□□ -1.87
PCDH18Q9HCL0 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.37□□□□□ -1.87
PCDH18Q9HCL0 AC112220.1-201ENST00000434628 355 ntBASIC3.37□□□□□ -1.87
PCDH18Q9HCL0 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
PCDH18Q9HCL0 AC115115.1-201ENST00000449927 248 ntBASIC3.37□□□□□ -1.87
PCDH18Q9HCL0 CYCSP35-201ENST00000451978 304 ntBASIC3.37□□□□□ -1.87
PCDH18Q9HCL0 RPL21P10-201ENST00000463521 490 ntBASIC3.37□□□□□ -1.87
PCDH18Q9HCL0 COX6CP14-201ENST00000469580 174 ntBASIC3.37□□□□□ -1.87
PCDH18Q9HCL0 AC091179.3-201ENST00000474761 144 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 157.5 ms