Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 BX322639.1-202ENST00000423987 2213 ntBASIC0.97□□□□□ -2.25
SND1-IT1Q9HBX3 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
SND1-IT1Q9HBX3 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
SND1-IT1Q9HBX3 RNU6-1235P-201ENST00000384559 107 ntBASIC0.97□□□□□ -2.25
SND1-IT1Q9HBX3 MIR517C-201ENST00000385103 95 ntBASIC0.97□□□□□ -2.25
SND1-IT1Q9HBX3 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.97□□□□□ -2.25
SND1-IT1Q9HBX3 AL627390.1-201ENST00000396055 340 ntBASIC0.97□□□□□ -2.25
SND1-IT1Q9HBX3 EIF1P1-201ENST00000421436 341 ntBASIC0.97□□□□□ -2.25
SND1-IT1Q9HBX3 AMD1P1-201ENST00000457220 922 ntBASIC0.97□□□□□ -2.25
SND1-IT1Q9HBX3 snoU13.27-201ENST00000459278 104 ntBASIC0.97□□□□□ -2.25
SND1-IT1Q9HBX3 RNU6-498P-201ENST00000459468 107 ntBASIC0.97□□□□□ -2.25
SND1-IT1Q9HBX3 RPS29P27-201ENST00000463711 170 ntBASIC0.97□□□□□ -2.25
SND1-IT1Q9HBX3 RPL30P7-201ENST00000479312 323 ntBASIC0.97□□□□□ -2.25
SND1-IT1Q9HBX3 HMGB1P29-201ENST00000505659 499 ntBASIC0.97□□□□□ -2.25
SND1-IT1Q9HBX3 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.97□□□□□ -2.25
SND1-IT1Q9HBX3 AC011406.1-201ENST00000512440 370 ntBASIC0.97□□□□□ -2.25
SND1-IT1Q9HBX3 RNU6-189P-201ENST00000516120 101 ntBASIC0.97□□□□□ -2.25
SND1-IT1Q9HBX3 RNU6-1041P-201ENST00000516254 102 ntBASIC0.97□□□□□ -2.25
SND1-IT1Q9HBX3 AC087854.1-201ENST00000519706 414 ntBASIC0.97□□□□□ -2.25
SND1-IT1Q9HBX3 DEFB131C-201ENST00000528817 165 ntBASIC0.97□□□□□ -2.25
SND1-IT1Q9HBX3 AK6P1-201ENST00000540219 478 ntBASIC0.97□□□□□ -2.25
SND1-IT1Q9HBX3 AC074050.1-201ENST00000563247 211 ntBASIC0.97□□□□□ -2.25
SND1-IT1Q9HBX3 SUB1P3-201ENST00000564581 315 ntBASIC0.97□□□□□ -2.25
SND1-IT1Q9HBX3 MIR4255-201ENST00000579351 72 ntBASIC0.97□□□□□ -2.25
SND1-IT1Q9HBX3 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC0.97□□□□□ -2.25
SND1-IT1Q9HBX3 AC087683.1-201ENST00000591187 441 ntBASIC0.97□□□□□ -2.25
SND1-IT1Q9HBX3 TCL6_2.1-201ENST00000615162 119 ntBASIC0.97□□□□□ -2.25
SND1-IT1Q9HBX3 AC008147.4-201ENST00000617570 1204 ntBASIC0.97□□□□□ -2.25
SND1-IT1Q9HBX3 AC103705.1-201ENST00000619013 241 ntBASIC0.97□□□□□ -2.25
SND1-IT1Q9HBX3 MPP6-209ENST00000625307 126 ntTSL 5 BASIC0.97□□□□□ -2.25
SND1-IT1Q9HBX3 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC0.97□□□□□ -2.25
SND1-IT1Q9HBX3 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC0.97□□□□□ -2.25
SND1-IT1Q9HBX3 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
SND1-IT1Q9HBX3 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC0.96□□□□□ -2.25
SND1-IT1Q9HBX3 MTND5P35-201ENST00000557537 1720 ntBASIC0.96□□□□□ -2.26
SND1-IT1Q9HBX3 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
SND1-IT1Q9HBX3 RNU5B-2P-201ENST00000363036 113 ntBASIC0.96□□□□□ -2.26
SND1-IT1Q9HBX3 RNU6-1065P-201ENST00000384513 106 ntBASIC0.96□□□□□ -2.26
SND1-IT1Q9HBX3 MIR504-201ENST00000385065 83 ntBASIC0.96□□□□□ -2.26
SND1-IT1Q9HBX3 SNORD73A-201ENST00000386062 65 ntBASIC0.96□□□□□ -2.26
SND1-IT1Q9HBX3 RNU4-26P-201ENST00000410270 107 ntBASIC0.96□□□□□ -2.26
SND1-IT1Q9HBX3 AL358453.1-201ENST00000422522 250 ntBASIC0.96□□□□□ -2.26
SND1-IT1Q9HBX3 MTCO2P19-201ENST00000427513 598 ntBASIC0.96□□□□□ -2.26
SND1-IT1Q9HBX3 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC0.96□□□□□ -2.26
SND1-IT1Q9HBX3 AC074290.1-201ENST00000448883 135 ntBASIC0.96□□□□□ -2.26
SND1-IT1Q9HBX3 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC0.96□□□□□ -2.26
SND1-IT1Q9HBX3 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC0.96□□□□□ -2.26
SND1-IT1Q9HBX3 RPS29P21-201ENST00000496272 170 ntBASIC0.96□□□□□ -2.26
SND1-IT1Q9HBX3 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC0.96□□□□□ -2.26
SND1-IT1Q9HBX3 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
SND1-IT1Q9HBX3 AC025465.4-201ENST00000513422 638 ntBASIC0.96□□□□□ -2.26
SND1-IT1Q9HBX3 SNORA25.15-201ENST00000516487 89 ntBASIC0.96□□□□□ -2.26
SND1-IT1Q9HBX3 Y_RNA.695-201ENST00000516715 107 ntBASIC0.96□□□□□ -2.26
SND1-IT1Q9HBX3 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC0.96□□□□□ -2.26
SND1-IT1Q9HBX3 IGLVVI-22-1-201ENST00000521183 211 ntBASIC0.96□□□□□ -2.26
SND1-IT1Q9HBX3 CENPUP1-201ENST00000526649 1202 ntBASIC0.96□□□□□ -2.26
SND1-IT1Q9HBX3 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC0.96□□□□□ -2.26
SND1-IT1Q9HBX3 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.96□□□□□ -2.26
SND1-IT1Q9HBX3 MIR4528-201ENST00000577763 90 ntBASIC0.96□□□□□ -2.26
SND1-IT1Q9HBX3 AL391646.1-201ENST00000603860 190 ntBASIC0.96□□□□□ -2.26
SND1-IT1Q9HBX3 AC104458.1-201ENST00000608243 463 ntBASIC0.96□□□□□ -2.26
SND1-IT1Q9HBX3 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC0.95□□□□□ -2.26
SND1-IT1Q9HBX3 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC0.95□□□□□ -2.26
SND1-IT1Q9HBX3 RNU6-545P-201ENST00000362681 104 ntBASIC0.95□□□□□ -2.26
SND1-IT1Q9HBX3 SNORD114-1-201ENST00000362705 72 ntBASIC0.95□□□□□ -2.26
SND1-IT1Q9HBX3 snoU2-30.2-201ENST00000362805 70 ntBASIC0.95□□□□□ -2.26
SND1-IT1Q9HBX3 RNU6-534P-201ENST00000364877 106 ntBASIC0.95□□□□□ -2.26
SND1-IT1Q9HBX3 RNU6-1286P-201ENST00000383871 107 ntBASIC0.95□□□□□ -2.26
SND1-IT1Q9HBX3 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC0.95□□□□□ -2.26
SND1-IT1Q9HBX3 RNU6-1158P-201ENST00000391167 107 ntBASIC0.95□□□□□ -2.26
SND1-IT1Q9HBX3 MRPL35P1-201ENST00000404272 572 ntBASIC0.95□□□□□ -2.26
SND1-IT1Q9HBX3 MIR1323-201ENST00000408090 73 ntBASIC0.95□□□□□ -2.26
SND1-IT1Q9HBX3 AC060773.1-201ENST00000421698 310 ntBASIC0.95□□□□□ -2.26
SND1-IT1Q9HBX3 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.95□□□□□ -2.26
SND1-IT1Q9HBX3 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC0.95□□□□□ -2.26
SND1-IT1Q9HBX3 SNRPGP13-201ENST00000442212 177 ntBASIC0.95□□□□□ -2.26
SND1-IT1Q9HBX3 AC009237.7-201ENST00000447357 229 ntBASIC0.95□□□□□ -2.26
SND1-IT1Q9HBX3 snoU13.6-201ENST00000458785 104 ntBASIC0.95□□□□□ -2.26
SND1-IT1Q9HBX3 SNORA40.12-201ENST00000516329 111 ntBASIC0.95□□□□□ -2.26
SND1-IT1Q9HBX3 RNU6-948P-201ENST00000516374 107 ntBASIC0.95□□□□□ -2.26
SND1-IT1Q9HBX3 RNA5SP61-201ENST00000516453 100 ntBASIC0.95□□□□□ -2.26
SND1-IT1Q9HBX3 SCOCP1-201ENST00000554676 349 ntBASIC0.95□□□□□ -2.26
SND1-IT1Q9HBX3 AC027807.1-201ENST00000559921 996 ntBASIC0.95□□□□□ -2.26
SND1-IT1Q9HBX3 MIR3937-201ENST00000580135 106 ntBASIC0.95□□□□□ -2.26
SND1-IT1Q9HBX3 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC0.95□□□□□ -2.26
SND1-IT1Q9HBX3 AP003465.2-201ENST00000602571 373 ntBASIC0.95□□□□□ -2.26
SND1-IT1Q9HBX3 AC073648.5-201ENST00000603502 305 ntBASIC0.95□□□□□ -2.26
SND1-IT1Q9HBX3 AC073114.1-201ENST00000612027 490 ntBASIC0.95□□□□□ -2.26
SND1-IT1Q9HBX3 AL158063.1-201ENST00000615349 536 ntBASIC0.95□□□□□ -2.26
SND1-IT1Q9HBX3 MIR338-201ENST00000636369 67 ntBASIC0.95□□□□□ -2.26
SND1-IT1Q9HBX3 SNORA29-201ENST00000384183 140 ntBASIC0.94□□□□□ -2.26
SND1-IT1Q9HBX3 MIR194-1-201ENST00000384892 85 ntBASIC0.94□□□□□ -2.26
SND1-IT1Q9HBX3 U8.13-201ENST00000390842 128 ntBASIC0.94□□□□□ -2.26
SND1-IT1Q9HBX3 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC0.94□□□□□ -2.26
SND1-IT1Q9HBX3 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC0.94□□□□□ -2.26
SND1-IT1Q9HBX3 AL513185.2-201ENST00000425543 193 ntBASIC0.94□□□□□ -2.26
SND1-IT1Q9HBX3 AL354695.1-201ENST00000427935 228 ntBASIC0.94□□□□□ -2.26
SND1-IT1Q9HBX3 USP9YP29-201ENST00000445112 563 ntBASIC0.94□□□□□ -2.26
SND1-IT1Q9HBX3 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC0.94□□□□□ -2.26
SND1-IT1Q9HBX3 AC091435.1-201ENST00000505442 584 ntBASIC0.94□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms