Protein–RNA interactions for Protein: Q9H4L4

SENP3, Sentrin-specific protease 3, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3Q9H4L4 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC7.65□□□□□ -1.18
SENP3Q9H4L4 RNA5SP87-201ENST00000384155 118 ntBASIC7.65□□□□□ -1.18
SENP3Q9H4L4 SNORA72.6-201ENST00000384520 129 ntBASIC7.65□□□□□ -1.18
SENP3Q9H4L4 SNORA8-201ENST00000384574 139 ntBASIC7.65□□□□□ -1.18
SENP3Q9H4L4 RNU4-88P-201ENST00000411220 86 ntBASIC7.65□□□□□ -1.18
SENP3Q9H4L4 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC7.65□□□□□ -1.18
SENP3Q9H4L4 TMEM183AP1-205ENST00000432739 290 ntBASIC7.65□□□□□ -1.18
SENP3Q9H4L4 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC7.65□□□□□ -1.18
SENP3Q9H4L4 MIR4691-201ENST00000583764 85 ntBASIC7.65□□□□□ -1.18
SENP3Q9H4L4 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC7.65□□□□□ -1.18
SENP3Q9H4L4 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC7.65□□□□□ -1.19
SENP3Q9H4L4 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
SENP3Q9H4L4 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
SENP3Q9H4L4 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
SENP3Q9H4L4 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
SENP3Q9H4L4 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
SENP3Q9H4L4 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
SENP3Q9H4L4 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
SENP3Q9H4L4 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
SENP3Q9H4L4 RNU6-369P-201ENST00000362515 102 ntBASIC7.64□□□□□ -1.19
SENP3Q9H4L4 SNORA1.2-201ENST00000365189 134 ntBASIC7.64□□□□□ -1.19
SENP3Q9H4L4 MIR1262-201ENST00000408276 93 ntBASIC7.64□□□□□ -1.19
SENP3Q9H4L4 AC004975.1-201ENST00000428733 208 ntBASIC7.64□□□□□ -1.19
SENP3Q9H4L4 RPS29P29-201ENST00000456396 171 ntBASIC7.64□□□□□ -1.19
SENP3Q9H4L4 MIR4284-201ENST00000578924 81 ntBASIC7.64□□□□□ -1.19
SENP3Q9H4L4 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC7.64□□□□□ -1.19
SENP3Q9H4L4 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
SENP3Q9H4L4 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
SENP3Q9H4L4 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC7.64□□□□□ -1.19
SENP3Q9H4L4 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
SENP3Q9H4L4 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
SENP3Q9H4L4 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC7.63□□□□□ -1.19
SENP3Q9H4L4 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC7.63□□□□□ -1.19
SENP3Q9H4L4 AP001029.2-203ENST00000589795 4910 ntBASIC7.63□□□□□ -1.19
SENP3Q9H4L4 RNU6-249P-201ENST00000363016 102 ntBASIC7.63□□□□□ -1.19
SENP3Q9H4L4 RNU6-291P-201ENST00000384720 107 ntBASIC7.63□□□□□ -1.19
SENP3Q9H4L4 RNA5SP332-201ENST00000391063 115 ntBASIC7.63□□□□□ -1.19
SENP3Q9H4L4 RNU2-63P-201ENST00000410792 194 ntBASIC7.63□□□□□ -1.19
SENP3Q9H4L4 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC7.63□□□□□ -1.19
SENP3Q9H4L4 AC123900.1-201ENST00000420390 96 ntBASIC7.63□□□□□ -1.19
SENP3Q9H4L4 SNORA31.1-201ENST00000515993 133 ntBASIC7.63□□□□□ -1.19
SENP3Q9H4L4 SNORA31.5-201ENST00000516190 133 ntBASIC7.63□□□□□ -1.19
SENP3Q9H4L4 MIR3675-201ENST00000583661 73 ntBASIC7.63□□□□□ -1.19
SENP3Q9H4L4 MFSD8-216ENST00000641147 4009 ntBASIC7.63□□□□□ -1.19
SENP3Q9H4L4 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
SENP3Q9H4L4 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
SENP3Q9H4L4 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC7.62□□□□□ -1.19
SENP3Q9H4L4 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
SENP3Q9H4L4 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
SENP3Q9H4L4 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC7.62□□□□□ -1.19
SENP3Q9H4L4 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
SENP3Q9H4L4 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
SENP3Q9H4L4 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
SENP3Q9H4L4 RNU6-50P-201ENST00000362356 103 ntBASIC7.62□□□□□ -1.19
SENP3Q9H4L4 RNU6-163P-201ENST00000384396 106 ntBASIC7.62□□□□□ -1.19
SENP3Q9H4L4 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
SENP3Q9H4L4 RNU6-913P-201ENST00000390913 95 ntBASIC7.62□□□□□ -1.19
SENP3Q9H4L4 SNORD90-201ENST00000391145 111 ntBASIC7.62□□□□□ -1.19
SENP3Q9H4L4 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
SENP3Q9H4L4 AC015922.2-201ENST00000435593 184 ntBASIC7.62□□□□□ -1.19
SENP3Q9H4L4 RPS29P11-201ENST00000496507 171 ntBASIC7.62□□□□□ -1.19
SENP3Q9H4L4 MVP-219ENST00000629059 120 ntTSL 5 BASIC7.62□□□□□ -1.19
SENP3Q9H4L4 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
SENP3Q9H4L4 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
SENP3Q9H4L4 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
SENP3Q9H4L4 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC7.61□□□□□ -1.19
SENP3Q9H4L4 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC7.61□□□□□ -1.19
SENP3Q9H4L4 Y_RNA.370-201ENST00000365589 108 ntBASIC7.61□□□□□ -1.19
SENP3Q9H4L4 MIR548U-201ENST00000390728 81 ntBASIC7.61□□□□□ -1.19
SENP3Q9H4L4 AL590399.4-201ENST00000436561 601 ntBASIC7.61□□□□□ -1.19
SENP3Q9H4L4 snoU13.1-201ENST00000459157 104 ntBASIC7.61□□□□□ -1.19
SENP3Q9H4L4 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC7.61□□□□□ -1.19
SENP3Q9H4L4 RN7SL812P-201ENST00000493791 279 ntBASIC7.61□□□□□ -1.19
SENP3Q9H4L4 RNU6-1041P-201ENST00000516254 102 ntBASIC7.61□□□□□ -1.19
SENP3Q9H4L4 AP000753.3-201ENST00000604083 169 ntBASIC7.61□□□□□ -1.19
SENP3Q9H4L4 MIR6830-201ENST00000636015 70 ntBASIC7.61□□□□□ -1.19
SENP3Q9H4L4 MIR338-201ENST00000636369 67 ntBASIC7.61□□□□□ -1.19
SENP3Q9H4L4 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
SENP3Q9H4L4 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
SENP3Q9H4L4 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC7.61□□□□□ -1.19
SENP3Q9H4L4 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC7.61□□□□□ -1.19
SENP3Q9H4L4 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
SENP3Q9H4L4 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
SENP3Q9H4L4 AC025031.4-201ENST00000621248 3271 ntBASIC7.6□□□□□ -1.19
SENP3Q9H4L4 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
SENP3Q9H4L4 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
SENP3Q9H4L4 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
SENP3Q9H4L4 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC7.6□□□□□ -1.19
SENP3Q9H4L4 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
SENP3Q9H4L4 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
SENP3Q9H4L4 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
SENP3Q9H4L4 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
SENP3Q9H4L4 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC7.6□□□□□ -1.19
SENP3Q9H4L4 RNU6-991P-201ENST00000516168 107 ntBASIC7.6□□□□□ -1.19
SENP3Q9H4L4 AC103810.1-201ENST00000579873 453 ntBASIC7.6□□□□□ -1.19
SENP3Q9H4L4 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
SENP3Q9H4L4 PTER-201ENST00000298942 3448 ntTSL 5 BASIC7.6□□□□□ -1.19
SENP3Q9H4L4 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
SENP3Q9H4L4 RNA5SP191-201ENST00000362585 102 ntBASIC7.59□□□□□ -1.19
SENP3Q9H4L4 SNORD115-3-201ENST00000363100 82 ntBASIC7.59□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 158.6 ms