Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
CCDC68Q9H2F9 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
CCDC68Q9H2F9 RNU1-76P-201ENST00000362903 159 ntBASIC2.17□□□□□ -2.06
CCDC68Q9H2F9 SNORD31B-201ENST00000364977 69 ntBASIC2.17□□□□□ -2.06
CCDC68Q9H2F9 RNU4-53P-201ENST00000410828 140 ntBASIC2.17□□□□□ -2.06
CCDC68Q9H2F9 AC244636.1-201ENST00000421152 228 ntBASIC2.17□□□□□ -2.06
CCDC68Q9H2F9 AC139712.2-201ENST00000424302 339 ntBASIC2.17□□□□□ -2.06
CCDC68Q9H2F9 AL513185.2-201ENST00000425543 193 ntBASIC2.17□□□□□ -2.06
CCDC68Q9H2F9 AL513124.1-201ENST00000450410 614 ntBASIC2.17□□□□□ -2.06
CCDC68Q9H2F9 MRPS17P9-201ENST00000511924 393 ntBASIC2.17□□□□□ -2.06
CCDC68Q9H2F9 RNU2-44P-201ENST00000516795 194 ntBASIC2.17□□□□□ -2.06
CCDC68Q9H2F9 RNU6-273P-201ENST00000516937 96 ntBASIC2.17□□□□□ -2.06
CCDC68Q9H2F9 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.17□□□□□ -2.06
CCDC68Q9H2F9 AC087441.2-201ENST00000529141 262 ntBASIC2.17□□□□□ -2.06
CCDC68Q9H2F9 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.17□□□□□ -2.06
CCDC68Q9H2F9 AL109918.3-201ENST00000603072 338 ntBASIC2.17□□□□□ -2.06
CCDC68Q9H2F9 uc_338.20-201ENST00000621563 178 ntBASIC2.17□□□□□ -2.06
CCDC68Q9H2F9 AC073869.6-201ENST00000640656 341 ntBASIC2.17□□□□□ -2.06
CCDC68Q9H2F9 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
CCDC68Q9H2F9 Y_RNA.212-201ENST00000364177 102 ntBASIC2.16□□□□□ -2.06
CCDC68Q9H2F9 SNORA8-201ENST00000384574 139 ntBASIC2.16□□□□□ -2.06
CCDC68Q9H2F9 SNORA12.2-201ENST00000391040 156 ntBASIC2.16□□□□□ -2.06
CCDC68Q9H2F9 RNA5SP212-201ENST00000391223 107 ntBASIC2.16□□□□□ -2.06
CCDC68Q9H2F9 HMGN2P19-201ENST00000425149 265 ntBASIC2.16□□□□□ -2.06
CCDC68Q9H2F9 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.16□□□□□ -2.06
CCDC68Q9H2F9 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.16□□□□□ -2.06
CCDC68Q9H2F9 AC130509.1-201ENST00000464158 433 ntBASIC2.16□□□□□ -2.06
CCDC68Q9H2F9 RNA5SP364-201ENST00000516938 78 ntBASIC2.16□□□□□ -2.06
CCDC68Q9H2F9 RNU6-1314P-201ENST00000517139 104 ntBASIC2.16□□□□□ -2.06
CCDC68Q9H2F9 AP002770.2-201ENST00000543613 532 ntBASIC2.16□□□□□ -2.06
CCDC68Q9H2F9 MIR3169-201ENST00000578032 83 ntBASIC2.16□□□□□ -2.06
CCDC68Q9H2F9 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.16□□□□□ -2.06
CCDC68Q9H2F9 AC019193.3-201ENST00000609144 554 ntBASIC2.16□□□□□ -2.06
CCDC68Q9H2F9 AC005562.2-201ENST00000618264 111 ntBASIC2.16□□□□□ -2.06
CCDC68Q9H2F9 IGHVIII-44-202ENST00000636235 289 ntBASIC2.16□□□□□ -2.06
CCDC68Q9H2F9 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.16□□□□□ -2.06
CCDC68Q9H2F9 AC068137.4-201ENST00000638485 296 ntBASIC2.16□□□□□ -2.06
CCDC68Q9H2F9 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
CCDC68Q9H2F9 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
CCDC68Q9H2F9 Y_RNA.157-201ENST00000363638 102 ntBASIC2.15□□□□□ -2.07
CCDC68Q9H2F9 SNORD116-11-201ENST00000383882 92 ntBASIC2.15□□□□□ -2.07
CCDC68Q9H2F9 MIR517A-201ENST00000385001 87 ntBASIC2.15□□□□□ -2.07
CCDC68Q9H2F9 SNORA11.4-201ENST00000408823 129 ntBASIC2.15□□□□□ -2.07
CCDC68Q9H2F9 RPS26P42-201ENST00000413485 326 ntBASIC2.15□□□□□ -2.07
CCDC68Q9H2F9 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.15□□□□□ -2.07
CCDC68Q9H2F9 UBE2V1P8-201ENST00000437166 265 ntBASIC2.15□□□□□ -2.07
CCDC68Q9H2F9 OR2AQ1P-201ENST00000451972 200 ntBASIC2.15□□□□□ -2.07
CCDC68Q9H2F9 RNU1-131P-201ENST00000458943 161 ntBASIC2.15□□□□□ -2.07
CCDC68Q9H2F9 AC087477.1-201ENST00000465747 340 ntBASIC2.15□□□□□ -2.07
CCDC68Q9H2F9 RPL23AP42-201ENST00000471152 471 ntBASIC2.15□□□□□ -2.07
CCDC68Q9H2F9 AF186996.7-201ENST00000492781 209 ntBASIC2.15□□□□□ -2.07
CCDC68Q9H2F9 RNU1-40P-201ENST00000516816 164 ntBASIC2.15□□□□□ -2.07
CCDC68Q9H2F9 RNU1-97P-201ENST00000516872 164 ntBASIC2.15□□□□□ -2.07
CCDC68Q9H2F9 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.15□□□□□ -2.07
CCDC68Q9H2F9 MIR3942-201ENST00000585264 109 ntBASIC2.15□□□□□ -2.07
CCDC68Q9H2F9 AC068790.6-201ENST00000602558 258 ntBASIC2.15□□□□□ -2.07
CCDC68Q9H2F9 AC016727.2-201ENST00000603988 621 ntBASIC2.15□□□□□ -2.07
CCDC68Q9H2F9 AP000907.4-201ENST00000604143 237 ntBASIC2.15□□□□□ -2.07
CCDC68Q9H2F9 AC093913.1-201ENST00000614178 329 ntBASIC2.15□□□□□ -2.07
CCDC68Q9H2F9 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.07
CCDC68Q9H2F9 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.15□□□□□ -2.07
CCDC68Q9H2F9 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.15□□□□□ -2.07
CCDC68Q9H2F9 Y_RNA.132-201ENST00000363421 102 ntBASIC2.14□□□□□ -2.07
CCDC68Q9H2F9 Y_RNA.135-201ENST00000363439 95 ntBASIC2.14□□□□□ -2.07
CCDC68Q9H2F9 RNA5SP138-201ENST00000365098 114 ntBASIC2.14□□□□□ -2.07
CCDC68Q9H2F9 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
CCDC68Q9H2F9 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
CCDC68Q9H2F9 AL356432.1-201ENST00000405809 419 ntBASIC2.14□□□□□ -2.07
CCDC68Q9H2F9 DAP3P1-201ENST00000441522 278 ntBASIC2.14□□□□□ -2.07
CCDC68Q9H2F9 RNU6-717P-201ENST00000459076 104 ntBASIC2.14□□□□□ -2.07
CCDC68Q9H2F9 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.14□□□□□ -2.07
CCDC68Q9H2F9 MTCO2P30-201ENST00000503662 364 ntBASIC2.14□□□□□ -2.07
CCDC68Q9H2F9 ACA59.1-201ENST00000515966 143 ntBASIC2.14□□□□□ -2.07
CCDC68Q9H2F9 SNRPGP18-201ENST00000553000 214 ntBASIC2.14□□□□□ -2.07
CCDC68Q9H2F9 AC026470.2-201ENST00000561492 181 ntBASIC2.14□□□□□ -2.07
CCDC68Q9H2F9 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC2.14□□□□□ -2.07
CCDC68Q9H2F9 MIR5006-201ENST00000583027 110 ntBASIC2.14□□□□□ -2.07
CCDC68Q9H2F9 MIR4672-201ENST00000583126 81 ntBASIC2.14□□□□□ -2.07
CCDC68Q9H2F9 AC137590.2-201ENST00000619709 240 ntBASIC2.14□□□□□ -2.07
CCDC68Q9H2F9 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.14□□□□□ -2.07
CCDC68Q9H2F9 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
CCDC68Q9H2F9 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.13□□□□□ -2.07
CCDC68Q9H2F9 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.13□□□□□ -2.07
CCDC68Q9H2F9 RNU6-545P-201ENST00000362681 104 ntBASIC2.13□□□□□ -2.07
CCDC68Q9H2F9 RNU6-1013P-201ENST00000384180 107 ntBASIC2.13□□□□□ -2.07
CCDC68Q9H2F9 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.13□□□□□ -2.07
CCDC68Q9H2F9 MTND4LP16-201ENST00000440828 295 ntBASIC2.13□□□□□ -2.07
CCDC68Q9H2F9 AC004386.2-201ENST00000441858 148 ntBASIC2.13□□□□□ -2.07
CCDC68Q9H2F9 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC2.13□□□□□ -2.07
CCDC68Q9H2F9 AC016925.1-201ENST00000458303 298 ntBASIC2.13□□□□□ -2.07
CCDC68Q9H2F9 RPL23AP75-201ENST00000491601 451 ntBASIC2.13□□□□□ -2.07
CCDC68Q9H2F9 SCARNA16.3-201ENST00000516595 184 ntBASIC2.13□□□□□ -2.07
CCDC68Q9H2F9 DEFB131C-201ENST00000528817 165 ntBASIC2.13□□□□□ -2.07
CCDC68Q9H2F9 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.13□□□□□ -2.07
CCDC68Q9H2F9 AP003465.2-201ENST00000602571 373 ntBASIC2.13□□□□□ -2.07
CCDC68Q9H2F9 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.13□□□□□ -2.07
CCDC68Q9H2F9 RMST_6.1-201ENST00000611980 203 ntBASIC2.13□□□□□ -2.07
CCDC68Q9H2F9 AC005296.1-201ENST00000616145 209 ntBASIC2.13□□□□□ -2.07
CCDC68Q9H2F9 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.13□□□□□ -2.07
CCDC68Q9H2F9 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 134 ms