Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
VPS11Q9H270 RNU6-653P-201ENST00000363074 106 ntBASIC3.35□□□□□ -1.87
VPS11Q9H270 Y_RNA.215-201ENST00000364204 112 ntBASIC3.35□□□□□ -1.87
VPS11Q9H270 RNU6-336P-201ENST00000364891 107 ntBASIC3.35□□□□□ -1.87
VPS11Q9H270 RNU6-17P-201ENST00000384245 107 ntBASIC3.35□□□□□ -1.87
VPS11Q9H270 RNU6-18P-201ENST00000384527 107 ntBASIC3.35□□□□□ -1.87
VPS11Q9H270 Y_RNA.570-201ENST00000384750 101 ntBASIC3.35□□□□□ -1.87
VPS11Q9H270 AL357075.1-201ENST00000404107 726 ntBASIC3.35□□□□□ -1.87
VPS11Q9H270 RN7SKP111-201ENST00000410349 271 ntBASIC3.35□□□□□ -1.87
VPS11Q9H270 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.35□□□□□ -1.87
VPS11Q9H270 RPS15AP7-201ENST00000439294 405 ntBASIC3.35□□□□□ -1.87
VPS11Q9H270 AC007395.1-201ENST00000451333 677 ntBASIC3.35□□□□□ -1.87
VPS11Q9H270 snoU13.30-201ENST00000458951 104 ntBASIC3.35□□□□□ -1.87
VPS11Q9H270 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.35□□□□□ -1.87
VPS11Q9H270 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.35□□□□□ -1.87
VPS11Q9H270 RPL30P1-201ENST00000488676 339 ntBASIC3.35□□□□□ -1.87
VPS11Q9H270 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.35□□□□□ -1.87
VPS11Q9H270 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.35□□□□□ -1.87
VPS11Q9H270 RNA5SP217-201ENST00000515959 91 ntBASIC3.35□□□□□ -1.87
VPS11Q9H270 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.35□□□□□ -1.87
VPS11Q9H270 RNU6-581P-201ENST00000516214 105 ntBASIC3.35□□□□□ -1.87
VPS11Q9H270 SNORD116-25-201ENST00000516517 92 ntBASIC3.35□□□□□ -1.87
VPS11Q9H270 RNU7-110P-201ENST00000516891 62 ntBASIC3.35□□□□□ -1.87
VPS11Q9H270 AL391813.1-201ENST00000603098 260 ntBASIC3.35□□□□□ -1.87
VPS11Q9H270 MIR7851-201ENST00000610611 160 ntBASIC3.35□□□□□ -1.87
VPS11Q9H270 AC019176.2-201ENST00000611579 315 ntBASIC3.35□□□□□ -1.87
VPS11Q9H270 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
VPS11Q9H270 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
VPS11Q9H270 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
VPS11Q9H270 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
VPS11Q9H270 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
VPS11Q9H270 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.34□□□□□ -1.87
VPS11Q9H270 MIR410-201ENST00000362222 80 ntBASIC3.34□□□□□ -1.87
VPS11Q9H270 Y_RNA.136-201ENST00000363444 102 ntBASIC3.34□□□□□ -1.87
VPS11Q9H270 Y_RNA.217-201ENST00000364214 105 ntBASIC3.34□□□□□ -1.87
VPS11Q9H270 Y_RNA.218-201ENST00000364218 104 ntBASIC3.34□□□□□ -1.87
VPS11Q9H270 AL359837.1-201ENST00000381357 287 ntBASIC3.34□□□□□ -1.87
VPS11Q9H270 MIR569-201ENST00000385228 96 ntBASIC3.34□□□□□ -1.87
VPS11Q9H270 MIR134-201ENST00000385258 73 ntBASIC3.34□□□□□ -1.87
VPS11Q9H270 RPL21P3-201ENST00000395517 478 ntBASIC3.34□□□□□ -1.87
VPS11Q9H270 RN7SKP202-201ENST00000410439 330 ntBASIC3.34□□□□□ -1.87
VPS11Q9H270 RNA5SP44-201ENST00000410446 133 ntBASIC3.34□□□□□ -1.87
VPS11Q9H270 Y_RNA.597-201ENST00000410463 100 ntBASIC3.34□□□□□ -1.87
VPS11Q9H270 AC010154.1-201ENST00000425857 269 ntBASIC3.34□□□□□ -1.87
VPS11Q9H270 AC009296.1-201ENST00000443146 155 ntBASIC3.34□□□□□ -1.87
VPS11Q9H270 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.34□□□□□ -1.87
VPS11Q9H270 AC006026.2-201ENST00000457376 180 ntBASIC3.34□□□□□ -1.87
VPS11Q9H270 snoU109.2-201ENST00000459316 135 ntBASIC3.34□□□□□ -1.87
VPS11Q9H270 Y_RNA.641-201ENST00000459414 105 ntBASIC3.34□□□□□ -1.87
VPS11Q9H270 AC146507.2-201ENST00000460608 476 ntBASIC3.34□□□□□ -1.87
VPS11Q9H270 AP000870.1-201ENST00000472927 406 ntBASIC3.34□□□□□ -1.87
VPS11Q9H270 AC025518.1-201ENST00000479856 347 ntBASIC3.34□□□□□ -1.87
VPS11Q9H270 AC104619.4-201ENST00000510773 249 ntBASIC3.34□□□□□ -1.87
VPS11Q9H270 RN7SKP272-201ENST00000516988 232 ntBASIC3.34□□□□□ -1.87
VPS11Q9H270 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.34□□□□□ -1.87
VPS11Q9H270 AC008739.2-201ENST00000597006 317 ntBASIC3.34□□□□□ -1.87
VPS11Q9H270 AC008749.1-201ENST00000597650 306 ntBASIC3.34□□□□□ -1.87
VPS11Q9H270 AC091152.3-201ENST00000604227 325 ntBASIC3.34□□□□□ -1.87
VPS11Q9H270 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.34□□□□□ -1.87
VPS11Q9H270 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
VPS11Q9H270 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
VPS11Q9H270 AC092435.3-201ENST00000565538 3654 ntBASIC3.34□□□□□ -1.88
VPS11Q9H270 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
VPS11Q9H270 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC3.33□□□□□ -1.88
VPS11Q9H270 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
VPS11Q9H270 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.33□□□□□ -1.88
VPS11Q9H270 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
VPS11Q9H270 RNU6-879P-201ENST00000364328 108 ntBASIC3.33□□□□□ -1.88
VPS11Q9H270 Y_RNA.273-201ENST00000364703 102 ntBASIC3.33□□□□□ -1.88
VPS11Q9H270 RNU4-9P-201ENST00000364951 139 ntBASIC3.33□□□□□ -1.88
VPS11Q9H270 RNU6-449P-201ENST00000383914 107 ntBASIC3.33□□□□□ -1.88
VPS11Q9H270 RNU6-21P-201ENST00000384710 107 ntBASIC3.33□□□□□ -1.88
VPS11Q9H270 RNU6-19P-201ENST00000384718 107 ntBASIC3.33□□□□□ -1.88
VPS11Q9H270 MIR1289-1-201ENST00000408836 144 ntBASIC3.33□□□□□ -1.88
VPS11Q9H270 SNORD12B-201ENST00000410433 91 ntBASIC3.33□□□□□ -1.88
VPS11Q9H270 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.33□□□□□ -1.88
VPS11Q9H270 PTGES3P4-201ENST00000426243 356 ntBASIC3.33□□□□□ -1.88
VPS11Q9H270 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.33□□□□□ -1.88
VPS11Q9H270 CR769767.1-201ENST00000436337 346 ntBASIC3.33□□□□□ -1.88
VPS11Q9H270 RPL23AP75-201ENST00000491601 451 ntBASIC3.33□□□□□ -1.88
VPS11Q9H270 RNU6-567P-201ENST00000516746 107 ntBASIC3.33□□□□□ -1.88
VPS11Q9H270 AC023632.4-201ENST00000517783 191 ntBASIC3.33□□□□□ -1.88
VPS11Q9H270 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC3.33□□□□□ -1.88
VPS11Q9H270 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.33□□□□□ -1.88
VPS11Q9H270 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.33□□□□□ -1.88
VPS11Q9H270 MIR1254-2-201ENST00000579553 63 ntBASIC3.33□□□□□ -1.88
VPS11Q9H270 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.33□□□□□ -1.88
VPS11Q9H270 AC005828.6-201ENST00000606610 232 ntBASIC3.33□□□□□ -1.88
VPS11Q9H270 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC3.33□□□□□ -1.88
VPS11Q9H270 SCARNA4-201ENST00000629045 128 ntBASIC3.33□□□□□ -1.88
VPS11Q9H270 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
VPS11Q9H270 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.33□□□□□ -1.88
VPS11Q9H270 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
VPS11Q9H270 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.32□□□□□ -1.88
VPS11Q9H270 RNU6-961P-201ENST00000363893 105 ntBASIC3.32□□□□□ -1.88
VPS11Q9H270 RNU6-514P-201ENST00000384208 107 ntBASIC3.32□□□□□ -1.88
VPS11Q9H270 RNU6-843P-201ENST00000384454 104 ntBASIC3.32□□□□□ -1.88
VPS11Q9H270 RNU1-139P-201ENST00000391307 165 ntBASIC3.32□□□□□ -1.88
VPS11Q9H270 AL357139.1-201ENST00000407792 426 ntBASIC3.32□□□□□ -1.88
VPS11Q9H270 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms