Protein–RNA interactions for Protein: Q9H269

VPS16, Vacuolar protein sorting-associated protein 16 homolog, humanhuman

Predictions only

Length 839 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16Q9H269 RPS15AP11-201ENST00000594193 385 ntBASIC2.96□□□□□ -1.94
VPS16Q9H269 AC010620.2-201ENST00000600135 313 ntBASIC2.96□□□□□ -1.94
VPS16Q9H269 AC097372.5-201ENST00000623665 376 ntBASIC2.96□□□□□ -1.94
VPS16Q9H269 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.96□□□□□ -1.94
VPS16Q9H269 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.96□□□□□ -1.94
VPS16Q9H269 AL359854.1-201ENST00000614203 1594 ntBASIC2.95□□□□□ -1.94
VPS16Q9H269 Y_RNA.14-201ENST00000362415 103 ntBASIC2.95□□□□□ -1.94
VPS16Q9H269 SNORD56.5-201ENST00000364281 72 ntBASIC2.95□□□□□ -1.94
VPS16Q9H269 RNU1-112P-201ENST00000364401 164 ntBASIC2.95□□□□□ -1.94
VPS16Q9H269 RNU1-140P-201ENST00000365040 165 ntBASIC2.95□□□□□ -1.94
VPS16Q9H269 RNU1-109P-201ENST00000383960 147 ntBASIC2.95□□□□□ -1.94
VPS16Q9H269 Y_RNA.518-201ENST00000384552 113 ntBASIC2.95□□□□□ -1.94
VPS16Q9H269 Y_RNA.562-201ENST00000384695 113 ntBASIC2.95□□□□□ -1.94
VPS16Q9H269 MIR491-201ENST00000384877 84 ntBASIC2.95□□□□□ -1.94
VPS16Q9H269 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
VPS16Q9H269 SNORA69.1-201ENST00000390904 137 ntBASIC2.95□□□□□ -1.94
VPS16Q9H269 RNA5SP210-201ENST00000391034 120 ntBASIC2.95□□□□□ -1.94
VPS16Q9H269 AC138623.1-201ENST00000418060 216 ntBASIC2.95□□□□□ -1.94
VPS16Q9H269 AC007098.1-201ENST00000420122 367 ntBASIC2.95□□□□□ -1.94
VPS16Q9H269 MTCO3P29-201ENST00000432119 779 ntBASIC2.95□□□□□ -1.94
VPS16Q9H269 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.95□□□□□ -1.94
VPS16Q9H269 RPEP5-201ENST00000441137 268 ntBASIC2.95□□□□□ -1.94
VPS16Q9H269 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.95□□□□□ -1.94
VPS16Q9H269 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.95□□□□□ -1.94
VPS16Q9H269 RPL30P10-201ENST00000488148 337 ntBASIC2.95□□□□□ -1.94
VPS16Q9H269 AIG1P1-201ENST00000503376 148 ntBASIC2.95□□□□□ -1.94
VPS16Q9H269 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.95□□□□□ -1.94
VPS16Q9H269 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.95□□□□□ -1.94
VPS16Q9H269 SCARNA17.1-201ENST00000516211 143 ntBASIC2.95□□□□□ -1.94
VPS16Q9H269 SCARNA17.2-201ENST00000516334 143 ntBASIC2.95□□□□□ -1.94
VPS16Q9H269 RNU6-911P-201ENST00000516523 104 ntBASIC2.95□□□□□ -1.94
VPS16Q9H269 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2.95□□□□□ -1.94
VPS16Q9H269 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.95□□□□□ -1.94
VPS16Q9H269 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.95□□□□□ -1.94
VPS16Q9H269 AC090897.2-201ENST00000581715 130 ntBASIC2.95□□□□□ -1.94
VPS16Q9H269 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.95□□□□□ -1.94
VPS16Q9H269 AL390123.1-201ENST00000603216 237 ntBASIC2.95□□□□□ -1.94
VPS16Q9H269 AL356157.2-201ENST00000605122 111 ntBASIC2.95□□□□□ -1.94
VPS16Q9H269 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.95□□□□□ -1.94
VPS16Q9H269 SCARNA17.4-201ENST00000614296 143 ntBASIC2.95□□□□□ -1.94
VPS16Q9H269 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.95□□□□□ -1.94
VPS16Q9H269 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.95□□□□□ -1.94
VPS16Q9H269 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.95□□□□□ -1.94
VPS16Q9H269 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
VPS16Q9H269 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.95□□□□□ -1.94
VPS16Q9H269 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.95□□□□□ -1.94
VPS16Q9H269 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.94□□□□□ -1.94
VPS16Q9H269 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
VPS16Q9H269 SNORD114-19-201ENST00000363072 75 ntBASIC2.94□□□□□ -1.94
VPS16Q9H269 SNORA68.1-201ENST00000364537 132 ntBASIC2.94□□□□□ -1.94
VPS16Q9H269 Y_RNA.471-201ENST00000384312 102 ntBASIC2.94□□□□□ -1.94
VPS16Q9H269 Y_RNA.526-201ENST00000384572 110 ntBASIC2.94□□□□□ -1.94
VPS16Q9H269 SNORA44-201ENST00000384584 132 ntBASIC2.94□□□□□ -1.94
VPS16Q9H269 RNU6-700P-201ENST00000391043 107 ntBASIC2.94□□□□□ -1.94
VPS16Q9H269 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
VPS16Q9H269 UBA52P6-201ENST00000399822 382 ntBASIC2.94□□□□□ -1.94
VPS16Q9H269 AL133475.1-201ENST00000404414 305 ntBASIC2.94□□□□□ -1.94
VPS16Q9H269 RPL21P38-201ENST00000418090 167 ntBASIC2.94□□□□□ -1.94
VPS16Q9H269 RPL23AP83-201ENST00000434984 473 ntBASIC2.94□□□□□ -1.94
VPS16Q9H269 AC243964.1-201ENST00000441814 261 ntBASIC2.94□□□□□ -1.94
VPS16Q9H269 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.94□□□□□ -1.94
VPS16Q9H269 RPL36AP48-201ENST00000485521 314 ntBASIC2.94□□□□□ -1.94
VPS16Q9H269 SNORA31.6-201ENST00000516241 130 ntBASIC2.94□□□□□ -1.94
VPS16Q9H269 AC034114.1-201ENST00000520293 285 ntBASIC2.94□□□□□ -1.94
VPS16Q9H269 MIR4635-201ENST00000583759 79 ntBASIC2.94□□□□□ -1.94
VPS16Q9H269 MIR4765-201ENST00000585007 77 ntBASIC2.94□□□□□ -1.94
VPS16Q9H269 AC130454.1-201ENST00000622948 401 ntBASIC2.94□□□□□ -1.94
VPS16Q9H269 AC241585.2-209ENST00000638217 143 ntBASIC2.94□□□□□ -1.94
VPS16Q9H269 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.94□□□□□ -1.94
VPS16Q9H269 AC010329.5-201ENST00000623497 2174 ntBASIC2.94□□□□□ -1.94
VPS16Q9H269 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
VPS16Q9H269 AC002543.1-201ENST00000299783 1954 ntBASIC2.93□□□□□ -1.94
VPS16Q9H269 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.93□□□□□ -1.94
VPS16Q9H269 OR56A5-201ENST00000340110 738 ntBASIC2.93□□□□□ -1.94
VPS16Q9H269 RNU6-1010P-201ENST00000362757 107 ntBASIC2.93□□□□□ -1.94
VPS16Q9H269 Y_RNA.477-201ENST00000384352 108 ntBASIC2.93□□□□□ -1.94
VPS16Q9H269 Y_RNA.552-201ENST00000384665 112 ntBASIC2.93□□□□□ -1.94
VPS16Q9H269 MIR592-201ENST00000384959 97 ntBASIC2.93□□□□□ -1.94
VPS16Q9H269 AL138827.1-201ENST00000402666 306 ntBASIC2.93□□□□□ -1.94
VPS16Q9H269 MIR548I3-201ENST00000408378 149 ntBASIC2.93□□□□□ -1.94
VPS16Q9H269 MIR548I1-201ENST00000408810 149 ntBASIC2.93□□□□□ -1.94
VPS16Q9H269 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.93□□□□□ -1.94
VPS16Q9H269 AC009296.1-201ENST00000443146 155 ntBASIC2.93□□□□□ -1.94
VPS16Q9H269 AC098869.1-201ENST00000481627 292 ntBASIC2.93□□□□□ -1.94
VPS16Q9H269 AC025465.3-201ENST00000510570 311 ntBASIC2.93□□□□□ -1.94
VPS16Q9H269 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.93□□□□□ -1.94
VPS16Q9H269 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.93□□□□□ -1.94
VPS16Q9H269 SNORA40.15-201ENST00000516884 107 ntBASIC2.93□□□□□ -1.94
VPS16Q9H269 RNU6-570P-201ENST00000517051 105 ntBASIC2.93□□□□□ -1.94
VPS16Q9H269 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.93□□□□□ -1.94
VPS16Q9H269 AP003733.2-201ENST00000529409 171 ntBASIC2.93□□□□□ -1.94
VPS16Q9H269 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.93□□□□□ -1.94
VPS16Q9H269 AC007375.1-201ENST00000554513 578 ntBASIC2.93□□□□□ -1.94
VPS16Q9H269 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.93□□□□□ -1.94
VPS16Q9H269 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.93□□□□□ -1.94
VPS16Q9H269 AL161756.2-201ENST00000604597 246 ntBASIC2.93□□□□□ -1.94
VPS16Q9H269 MIR7515-201ENST00000637837 67 ntBASIC2.93□□□□□ -1.94
VPS16Q9H269 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
VPS16Q9H269 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.92□□□□□ -1.94
VPS16Q9H269 RNU6-227P-201ENST00000362865 103 ntBASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms